Lorenzo Farina

Affiliations:

Sapienza University of Rome, Italy

According to our database¹, Lorenzo Farina authored at least 35 papers between 1996 and 2022.

Collaborative distances:

Dijkstra number² of five.
Erdős number³ of four.

Timeline

Legend:

Book

In proceedings

Article

PhD thesis

Other

Bibliography

2022

StaRTrEK: in silico estimation of RNA half-lives from genome-wide time-course experiments without transcriptional inhibition.

[BibT_eX]

[DOI]

BMC Bioinform., 2022

Differential Co-expression Network Analysis to Investigate Sexual Dimorphism in Colon Cancer.

[BibT_eX]

[DOI]

Caterina Alfano

Lorenzo Farina

Manuela Petti

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

SAveRUNNER: A network-based algorithm for drug repurposing and its application to COVID-19.

[BibT_eX]

[DOI]

PLoS Comput. Biol., 2021

SEaCorAl: Identifying and contrasting the regulation-correlation bias in RNA-Seq paired expression data of patient groups.

[BibT_eX]

[DOI]

Comput. Biol. Medicine, 2021

Protein-Protein Interaction Prediction via Graph Signal Processing.

[BibT_eX]

[DOI]

IEEE Access, 2021

2020

Connectivity Significance for Disease Gene Prioritization in an Expanding Universe.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2020

2019

Network Inference and Reconstruction in Bioinformatics.

[BibT_eX]

[DOI]

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

NEMESIS (NEtwork MEdicine analySIS): Towards Visual Exploration of Network Medicine Data.

[BibT_eX]

[DOI]

Proceedings of the 14th International Joint Conference on Computer Vision, 2019

Biological Random Walks: Integrating heterogeneous data in disease gene prioritization.

[BibT_eX]

[DOI]

Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2019

2014

Computational analysis identifies a sponge interaction network between long non-coding RNAs and messenger RNAs in human breast cancer.

[BibT_eX]

[DOI]

Paola Paci

Teresa Colombo

Lorenzo Farina

BMC Syst. Biol., 2014

Combining optimization and machine learning techniques for genome-wide prediction of human cell cycle-regulated genes.

[BibT_eX]

[DOI]

Bioinform., 2014

2012

Internally Positive Representation of a Class of Continuous Time Systems.

[BibT_eX]

[DOI]

IEEE Trans. Autom. Control., 2012

Stochastic Modeling of Expression Kinetics Identifies Messenger Half-Lives and Reveals Sequential Waves of Co-ordinated Transcription and Decay.

[BibT_eX]

[DOI]

PLoS Comput. Biol., 2012

2010

Identification of Regulatory Network Motifs from Gene Expression Data.

[BibT_eX]

[DOI]

J. Math. Model. Algorithms, 2010

Discussion on: "Representation of a Class of MIMO Systems via Internally Positive Realization".

[BibT_eX]

[DOI]

Lorenzo Farina

Eur. J. Control, 2010

Discrete-time models for gene transcriptional regulation networks.

[BibT_eX]

[DOI]

Proceedings of the 49th IEEE Conference on Decision and Control, 2010

A method for Internally Positive Realization of continuous time systems.

[BibT_eX]

[DOI]

Proceedings of the 49th IEEE Conference on Decision and Control, 2010

2009

mRNA stability and the unfolding of gene expression in the long-period yeast metabolic cycle.

[BibT_eX]

[DOI]

BMC Syst. Biol., 2009

2008

Embedding mRNA Stability in Correlation Analysis of Time-Series Gene Expression Data.

[BibT_eX]

[DOI]

PLoS Comput. Biol., 2008

2006

Correction to "A Note on Minimality of Positive Realizations".

[BibT_eX]

[DOI]

Luca Benvenuti

Lorenzo Farina

IEEE Trans. Circuits Syst. I Regul. Pap., 2006

Nonnegative matrices in digital signal processing.

[BibT_eX]

[DOI]

Luca Benvenuti

Lorenzo Farina

Signal Process., 2006

The Geometry of the Reachability Set for Linear Discrete-time Systems with Positive Controls.

[BibT_eX]

[DOI]

Luca Benvenuti

Lorenzo Farina

SIAM J. Matrix Anal. Appl., 2006

2004

A tutorial on the positive realization problem.

[BibT_eX]

[DOI]

Luca Benvenuti

Lorenzo Farina

IEEE Trans. Autom. Control., 2004

Eigenvalue regions for positive systems.

[BibT_eX]

[DOI]

Luca Benvenuti

Lorenzo Farina

Syst. Control. Lett., 2004

A high speed and low power CMOS current comparator for photon counting systems.

[BibT_eX]

[DOI]

Proceedings of the 2004 International Symposium on Circuits and Systems, 2004

2003

Minimal positive realizations: a survey of recent results and open problems.

[BibT_eX]

[DOI]

Luca Benvenuti

Lorenzo Farina

Kybernetika, 2003

2002

Positive and compartmental systems.

[BibT_eX]

[DOI]

Luca Benvenuti

Lorenzo Farina

IEEE Trans. Autom. Control., 2002

Linear programming approach to constrained feedback control.

[BibT_eX]

[DOI]

Luca Benvenuti

Lorenzo Farina

Int. J. Syst. Sci., 2002

Identification of positive linear systems with Poisson output transformation.

[BibT_eX]

[DOI]

Alberto De Santis

Lorenzo Farina

Autom., 2002

On model consistency in compartmental systems identification.

[BibT_eX]

[DOI]

Luca Benvenuti

Alberto De Santis

Lorenzo Farina

Autom., 2002

Embedding a-priori positivity in systems modelling.

[BibT_eX]

[DOI]

Luca Benvenuti

Alberto De Santis

Lorenzo Farina

Proceedings of the American Control Conference, 2002

How many compartments do we really need? [LTI systems].

[BibT_eX]

[DOI]

Luca Benvenuti

Lorenzo Farina

Proceedings of the American Control Conference, 2002

2000

An Algebraic Approach to the Construction of Polyhedral Invariant Cones.

[BibT_eX]

[DOI]

Maria Elena Valcher

Lorenzo Farina

SIAM J. Matrix Anal. Appl., 2000

1997

Polyhedral reachable set with positive controls.

[BibT_eX]

[DOI]

Lorenzo Farina

Luca Benvenuti

Math. Control. Signals Syst., 1997

1996

Discrete-time filtering via charge routing networks.

[BibT_eX]

[DOI]

Luca Benvenuti

Lorenzo Farina

Signal Process., 1996

Lorenzo Farina

Timeline

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