Marc S. Halfon

According to our database, Marc S. Halfon authored at least 10 papers between 2004 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2020

PeakMatcher: Matching Peaks Across Genome Assemblies.

Ronald J. Nowling, Christopher R. Beal, Scott J. Emrich, Susanta K. Behura, Marc S. Halfon, Molly Duman-Scheel

Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020

2019

Computational enhancer prediction: evaluation and improvements.

Hasiba Asma, Marc S. Halfon

BMC Bioinform., December, 2019

REDfly: the transcriptional regulatory element database for Drosophila.

John Rivera, Soile V. E. Keränen, Steven M. Gallo, Marc S. Halfon

Nucleic Acids Res., 2019

2011

REDfly v3.0: toward a comprehensive database of transcriptional regulatory elements in <i>Drosophila</i>.

Steven M. Gallo, Dave T. Gerrard, David Miner, Michael Simich, Benjamin Des Soye, Casey M. Bergman, Marc S. Halfon

Nucleic Acids Res., 2011

A wholly defined Agilent microarray spike-in dataset.

Qianqian Zhu, Jeffrey C. Miecznikowski, Marc S. Halfon

Bioinform., 2011

2010

Preferred analysis methods for Affymetrix GeneChips. II. An expanded, balanced, wholly-defined spike-in dataset.

Qianqian Zhu, Jeffrey C. Miecznikowski, Marc S. Halfon

BMC Bioinform., 2010

2008

REDfly 2.0: an integrated database of <i>cis</i>-regulatory modules and transcription factor binding sites in <i>Drosophila</i>.

Marc S. Halfon, Steven M. Gallo, Casey M. Bergman

Nucleic Acids Res., 2008

ORegAnno: an open-access community-driven resource for regulatory annotation.

Obi L. Griffith, Stephen B. Montgomery, Bridget Bernier, Bryan Chu, Katayoon Kasaian, Stein Aerts, Shaun Mahony, Monica C. Sleumer, Mikhail Bilenky, Maximilian Haeussler, Malachi Griffith, Steven M. Gallo, Belinda Giardine, Bart Hooghe, Peter Van Loo, Enrique Blanco, Amy Ticoll, Stuart Lithwick, Elodie Portales-Casamar, Ian J. Donaldson, Gordon Robertson, Claes Wadelius, Pieter J. De Bleser, Dominique Vlieghe, Marc S. Halfon, Wyeth W. Wasserman, Ross C. Hardison, Casey M. Bergman, Steven J. M. Jones

Nucleic Acids Res., 2008

2006

<i>REDfly: </i> a Regulatory Element Database for <i>Drosophila</i>.

Steven M. Gallo, Long Li, Zihua Hu, Marc S. Halfon

Bioinform., 2006

2004

Prediction of similarly acting cis-regulatory modules by subsequence profiling and comparative genomics in Drosophila melanogaster and D.pseudoobscura.

Yonatan H. Grad, Frederick P. Roth, Marc S. Halfon, George M. Church

Bioinform., 2004