Stein Aerts

According to our database, Stein Aerts authored at least 12 papers between 2002 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2019

GRNBoost2 and Arboreto: efficient and scalable inference of gene regulatory networks.

Thomas Moerman, Sara Aibar Santos, Carmen Bravo González-Blas, Jaak Simm, Yves Moreau, Jan Aerts, Stein Aerts

Bioinform., 2019

2015

Identification of High-Impact <i>cis</i>-Regulatory Mutations Using Transcription Factor Specific Random Forest Models.

Dmitry Svetlichnyy, Hana Imrichová, Mark Fiers, Zeynep Kalender Atak, Stein Aerts

PLoS Comput. Biol., 2015

i-cisTarget 2015 update: generalized cis-regulatory enrichment analysis in human, mouse and fly.

Hana Imrichová, Gert Hulselmans, Zeynep Kalender Atak, Delphine Potier, Stein Aerts

Nucleic Acids Res., 2015

2014

iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track Collections.

Rekin's Janky, Annelien Verfaillie, Hana Imrichová, Bram Van de Sande, Laura Standaert, Valerie Christiaens, Gert Hulselmans, Koen Herten, Marina Naval Sanchez, Delphine Potier, Dmitry Svetlichnyy, Zeynep Kalender Atak, Mark Fiers, Jean-Christophe Marine, Stein Aerts

PLoS Comput. Biol., 2014

2008

ENDEAVOUR update: a web resource for gene prioritization in multiple species.

Léon-Charles Tranchevent, Roland Barriot, Shi Yu, Steven Van Vooren, Peter Van Loo, Bert Coessens, Bart De Moor, Stein Aerts, Yves Moreau

Nucleic Acids Res., 2008

ORegAnno: an open-access community-driven resource for regulatory annotation.

Obi L. Griffith, Stephen B. Montgomery, Bridget Bernier, Bryan Chu, Katayoon Kasaian, Stein Aerts, Shaun Mahony, Monica C. Sleumer, Mikhail Bilenky, Maximilian Haeussler, Malachi Griffith, Steven M. Gallo, Belinda Giardine, Bart Hooghe, Peter Van Loo, Enrique Blanco, Amy Ticoll, Stuart Lithwick, Elodie Portales-Casamar, Ian J. Donaldson, Gordon Robertson, Claes Wadelius, Pieter J. De Bleser, Dominique Vlieghe, Marc S. Halfon, Wyeth W. Wasserman, Ross C. Hardison, Casey M. Bergman, Steven J. M. Jones

Nucleic Acids Res., 2008

2006

Prediction of a key role of motifs binding E2F and NR2F in down-regulation of numerous genes during the development of the mouse hippocampus.

Michal Dabrowski, Stein Aerts, Bozena Kaminska

BMC Bioinform., 2006

2005

TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis.

Stein Aerts, Peter Van Loo, Gert Thijs, Herbert Mayer, Rainer de Martin, Yves Moreau, Bart De Moor

Nucleic Acids Res., 2005

2004

A genetic algorithm for the detection of new cis-regulatory modules in sets of coregulated genes.

Stein Aerts, Peter Van Loo, Yves Moreau, Bart De Moor

Bioinform., 2004

2003

INCLUSive: a web portal and service registry for microarray and regulatory sequence analysis.

Bert Coessens, Gert Thijs, Stein Aerts, Kathleen Marchal, Frank De Smet, Kristof Engelen, Patrick Glenisson, Yves Moreau, Janick Mathys, Bart De Moor

Nucleic Acids Res., 2003

Computational detection of cis-regulatory modules.

Stein Aerts, Peter Van Loo, Gert Thijs, Yves Moreau, Bart De Moor

Proceedings of the European Conference on Computational Biology (ECCB 2003), 2003

2002

Web-based Data Collection for Uterine Adnexal Tumors: A Case Study.

Stein Aerts, Peter Antal, Dirk Timmerman, Bart De Moor, Yves Moreau

Proceedings of the 15th IEEE Symposium on Computer-Based Medical Systems (CBMS 2002), 2002