Matteo Cavaliere

Appl. Math. Comput., April, 2024

2022

Evolutionary game theory in a cell: A membrane computing approach.

[BibT_eX]

[DOI]

Pedro García-Victoria

Miguel A. Gutiérrez-Naranjo

Miguel Cárdenas-Montes

Inf. Sci., 2022

2021

Automatic Design of Spiking Neural P Systems Based on Genetic Algorithms.

[BibT_eX]

[DOI]

Int. J. Unconv. Comput., 2021

Quantification of cell behaviors and computational modeling show that cell directional behaviors drive zebrafish pectoral fin morphogenesis.

[BibT_eX]

[DOI]

Bioinform., 2021

2018

Preface.

[BibT_eX]

[DOI]

Alfonso Rodríguez-Patón

Nat. Comput., 2018

Compiling Combinatorial Genetic Circuits with Semantic Inference.

[BibT_eX]

[DOI]

CoRR, 2018

Annotations for Rule-Based Models.

[BibT_eX]

[DOI]

Vincent Danos

Ricardo Honorato-Zimmer

William Waites

CoRR, 2018

An Information-Theoretic Measure for Patterning in Epithelial Tissues.

[BibT_eX]

[DOI]

IEEE Access, 2018

2016

Annotation of rule-based models with formal semantics to enable creation, analysis, reuse and visualization.

[BibT_eX]

[DOI]

Ricardo Honorato-Zimmer

Paolo Zuliani

Vincent Danos

Anil Wipat

Bioinform., 2016

The Evolutionary Resilience of Distributed Cellular Computing.

[BibT_eX]

[DOI]

Alvaro Sanchez

Proceedings of the Membrane Computing - 17th International Conference, CMC 2016, Milan, 2016

2014

The Stochastic Loss of Spikes in Spiking Neural P Systems: Design and Implementation of Reliable Arithmetic Circuits.

[BibT_eX]

[DOI]

Fundam. Informaticae, 2014

2011

Computing by observing: Simple systems and simple observers.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2011

On aggregation in multiset-based self-assembly of graphs.

[BibT_eX]

[DOI]

Hendrik Jan Hoogeboom

Grzegorz Rozenberg

Nat. Comput., 2011

An Observer-Based de-Quantisation of Deutsch's Algorithm.

[BibT_eX]

[DOI]

Cristian S. Calude

Int. J. Found. Comput. Sci., 2011

2010

Computing by observing.

[BibT_eX]

[DOI]

Scholarpedia, 2010

2009

Asynchronous spiking neural P systems.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2009

DNA splicing: computing by observing.

[BibT_eX]

[DOI]

Natasa Jonoska

Nat. Comput., 2009

Computing by Observing Changes.

[BibT_eX]

[DOI]

Proceedings of the Natural Computing - 4th International Workshop on Natural Computing, 2009

2008

Decision problems in membrane systems with peripheral proteins, transport and evolution.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2008

A multiset-based model of synchronizing agents: Computability and robustness.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2008

Membrane systems with proteins embedded in membranes.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2008

Experiments on the reliability of stochastic spiking neural P systems.

[BibT_eX]

[DOI]

Ivan Mura

Nat. Comput., 2008

A Logical Characterization of Robustness, Mutants and Species in Colonies of Agents.

[BibT_eX]

[DOI]

Int. J. Found. Comput. Sci., 2008

Cell Cycle and Tumor Growth in Membrane Systems with Peripheral Proteins.

[BibT_eX]

[DOI]

Tommaso Mazza

Proceedings of the Second International Meeting on Membrane Computing and Biologically Inspired Process Calculi, 2008

Complexity through the Observation of Simple Systems

[BibT_eX]

[DOI]

Proceedings of the Proceedings International Workshop on The Complexity of Simple Programs, 2008

Computing by Observing: A Brief Survey.

[BibT_eX]

[DOI]

Proceedings of the Logic and Theory of Algorithms, 2008

2007

Multiset random context grammars, checkers, and transducers.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2007

Asynchronous Spiking Neural P Systems: Decidability and Undecidability.

[BibT_eX]

[DOI]

Proceedings of the DNA Computing, 13th International Meeting on DNA Computing, 2007

2006

Event-Related Outputs of Computations in P Systems.

[BibT_eX]

[DOI]

J. Autom. Lang. Comb., 2006

Communication Membrane Systems with Active Symports.

[BibT_eX]

[DOI]

J. Autom. Lang. Comb., 2006

Further results on time-free P systems.

[BibT_eX]

[DOI]

Vincenzo Deufemia

Int. J. Found. Comput. Sci., 2006

Observation of String-Rewriting Systems.

[BibT_eX]

[DOI]

Fundam. Informaticae, 2006

Membrane Systems with Peripheral Proteins: Transport and Evolution.

[BibT_eX]

[DOI]

Proceedings of the First Workshop on Membrane Computing and Biologically Inspired Process Calculi, 2006

Membrane Systems with Marked Membranes.

[BibT_eX]

[DOI]

Proceedings of the First Workshop on Membrane Computing and Biologically Inspired Process Calculi, 2006

Modeling Respiration in Bacteria and Respiration/Photosynthesis Interaction in Cyanobacteria Using a P System Simulator.

[BibT_eX]

[DOI]

Ioan I. Ardelean

Proceedings of the Applications of Membrane Computing, 2006

Partial Knowledge in Membrane Systems: A Logical Approach.

[BibT_eX]

[DOI]

Proceedings of the Membrane Computing, 7th International Workshop, 2006

Membrane Systems with External Control.

[BibT_eX]

[DOI]

Proceedings of the Membrane Computing, 7th International Workshop, 2006

Computing by Only Observing.

[BibT_eX]

[DOI]

Pierluigi Frisco

Hendrik Jan Hoogeboom

Proceedings of the Developments in Language Theory, 10th International Conference, 2006

Modeling and Simulating Biological Processes with Stochastic Multiset Rewriting.

[BibT_eX]

[DOI]

Proceedings of the Simulation and Verification of Dynamic Systems, 17.04. - 22.04.2006, 2006

Modelling Cellular Processes Using Membrane Systems with Peripheral and Integral Proteins.

[BibT_eX]

[DOI]

Proceedings of the Computational Methods in Systems Biology, International Conference, 2006

2005

Computing using signals: from cells to P systems.

[BibT_eX]

[DOI]

Ioan I. Ardelean

Dragos Sburlan

Soft Comput., 2005

Time and Synchronization in Membrane Systems.

[BibT_eX]

[DOI]

Dragos Sburlan

Fundam. Informaticae, 2005

Recognizing DNA Splicing.

[BibT_eX]

[DOI]

Natasa Jonoska

Proceedings of the DNA Computing, 11th International Workshop on DNA Computing, 2005

2004

Evolution and observation--a non-standard way to generate formal languages.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2004

P Systems with Symport/Antiport of Rules.

[BibT_eX]

[DOI]

Daniela Genova

J. Univers. Comput. Sci., 2004

Time-Independent P Systems.

[BibT_eX]

[DOI]

Dragos Sburlan

Proceedings of the Membrane Computing, 5th International Workshop, 2004

Inhibiting/De-inhibiting Rules in P Systems.

[BibT_eX]

[DOI]

Mihai Ionescu

Tseren-Onolt Ishdorj

Proceedings of the Membrane Computing, 5th International Workshop, 2004

Evolution and Observation: A Non-standard Way to Accept Formal Languages.

[BibT_eX]

[DOI]

Proceedings of the Machines, Computations, and Universality, 4th International Conference, 2004

Biomolecular Implementation of Computing Devices with Unbounded Memory.

[BibT_eX]

[DOI]

Proceedings of the DNA Computing, 10th International Workshop on DNA Computing, 2004

Computing by Observing Bio-systems: The Case of Sticker Systems.

[BibT_eX]

[DOI]

Artiom Alhazov

Proceedings of the DNA Computing, 10th International Workshop on DNA Computing, 2004

2003

Forbidding and enforcing in membrane computing.

[BibT_eX]

[DOI]

Natasa Jonoska

Nat. Comput., 2003

Modelling biological processes by using a probabilistic P system software.

[BibT_eX]

[DOI]

Ioan I. Ardelean

Nat. Comput., 2003

Evolution and Observation: A New Way to Look at Membrane Systems.

[BibT_eX]

[DOI]

Proceedings of the Membrane Computing, International Workshop, 2003

Proton Pumping P Systems.

[BibT_eX]

[DOI]

Artiom Alhazov

Proceedings of the Membrane Computing, International Workshop, 2003

2002

An Application of Dynamic P Systems: Generating Context-Free Languages.

[BibT_eX]

[DOI]

Proceedings of the Membrane Computing, International Workshop, 2002

Evolution-Communication P Systems.

[BibT_eX]

[DOI]