Matthew Scotch

Orcid: 0000-0001-5100-9724

According to our database1, Matthew Scotch authored at least 30 papers between 2002 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2023
Foundational domains and competencies for baccalaureate health informatics education.
J. Am. Medical Informatics Assoc., September, 2023

2022
Towards Standards for Undergraduate Health Informatics Education.
Proceedings of the AMIA 2022, 2022

2021
High-throughput sequencing of SARS-CoV-2 in wastewater provides insights into circulating variants.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020
GeoBoost2: a natural languageprocessing pipeline for GenBank metadata enrichment for virus phylogeography.
Bioinform., 2020

2019
SemEval-2019 Task 12: Toponym Resolution in Scientific Papers.
Proceedings of the 13th International Workshop on Semantic Evaluation, 2019

Bi-directional Recurrent Neural Network Models for Geographic Location Extraction in Biomedical Literature.
Proceedings of the Biocomputing 2019: Proceedings of the Pacific Symposium, 2019

2018
GeoBoost: accelerating research involving the geospatial metadata of virus GenBank records.
Bioinform., 2018

Deep neural networks and distant supervision for geographic location mention extraction.
Bioinform., 2018

Clinical NER and Relation Extraction using Bi-Char-LSTMs and Random Forest Classifiers.
Proceedings of the 1st International Workshop on Medication and Adverse Drug Event Detection, 2018

2017
Bayesian phylogeography of influenza A/H3N2 for the 2014-15 season in the United States using three frameworks of ancestral state reconstruction.
PLoS Comput. Biol., 2017

Named entity linking of geospatial and host metadata in GenBank for advancing biomedical research.
Database J. Biol. Databases Curation, 2017

CSaRUS-CNN at AMIA-2017 Tasks 1, 2: Under Sampled CNN for Text Classification.
Proceedings of the 2nd Social Media Mining for Health Research and Applications Workshop co-located with the American Medical Informatics Association Annual Symposium (AMIA 2017), 2017

2016
A high-precision rule-based extraction system for expanding geospatial metadata in GenBank records.
J. Am. Medical Informatics Assoc., 2016

Session Introduction.
Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016

2015
Knowledge-driven geospatial location resolution for phylogeographic models of virus migration.
Bioinform., 2015

Analyses of Merging Clinical and Viral Genetic Data for Influenza Surveillance.
Proceedings of the AMIA 2015, 2015

2014
Comparison of ARIMA and Random Forest time series models for prediction of avian influenza H5N1 outbreaks.
BMC Bioinform., 2014

Natural Language Processing Methods for Enhancing Geographic Metadata for Phylogeography of Zoonotic Viruses.
Proceedings of BioNLP, Baltimore, Maryland, USA, 2014

2013
Using value of information to guide evaluation of decision supports for differential diagnosis: is it time for a new look?
BMC Medical Informatics Decis. Mak., 2013

Creating a MRSA Ontology to Support Categorization of MRSA Infections.
Proceedings of the AMIA 2013, 2013

2011
Enhancing phylogeography by improving geographical information from GenBank.
J. Biomed. Informatics, 2011

The Yale cTAKES extensions for document classification: architecture and application.
J. Am. Medical Informatics Assoc., 2011

2010
Brief review: Use of statistical analysis in the biomedical informatics literature.
J. Am. Medical Informatics Assoc., 2010

2008
Evaluation of SOVAT: An OLAP-GIS decision support system for community health assessment data analysis.
BMC Medical Informatics Decis. Mak., 2008

HCLS 2.0/3.0: Health care and life sciences data mashup using Web 2.0/3.0.
J. Biomed. Informatics, 2008

Case Report: Development of Grid-like Applications for Public Health Using Web 2.0 Mashup Techniques.
J. Am. Medical Informatics Assoc., 2008

2006
Development of SOVAT: A numerical-spatial decision support system for community health assessment research.
Int. J. Medical Informatics, 2006

2005
SOVAT: Spatial OLAP Visualization and Analysis Tool.
Proceedings of the 38th Hawaii International Conference on System Sciences (HICSS-38 2005), 2005

2002
The sublanguage of cross-coverage.
Proceedings of the AMIA 2002, 2002

The Companion Project - A Wearable Computing Device for the Patient for Reducing Medical Errors and Improving Patient Care.
Proceedings of the AMIA 2002, 2002


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