Neil R. Smalheiser

According to our database, Neil R. Smalheiser authored at least 45 papers between 1996 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Editorial: Emerging areas in literature-based discovery.

Yakub Sebastian, Neil R. Smalheiser

Frontiers Res. Metrics Anal., April, 2023

2022

A web-based tool for automatically linking clinical trials to their publications.

Neil R. Smalheiser, Arthur W. Holt

J. Am. Medical Informatics Assoc., 2022

2021

Editorial: Coronavirus Research Landscape: Resources, Utilities, and Analytic Studies.

Chaomei Chen, David Chavalarias, Neil R. Smalheiser, Dietmar Wolfram

Frontiers Res. Metrics Anal., 2021

2020

Identifying main finding sentences in clinical case reports.

Mengqi Luo, Aaron M. Cohen, Sidharth Addepalli, Neil R. Smalheiser

Database J. Biol. Databases Curation, 2020

2019

Unsupervised low-dimensional vector representations for words, phrases and text that are transparent, scalable, and produce similarity metrics that are not redundant with neural embeddings.

Neil R. Smalheiser, Aaron M. Cohen, Gary Bonifield

J. Biomed. Informatics, 2019

A manual corpus of annotated main findings of clinical case reports.

Neil R. Smalheiser, Mengqi Luo, Sidharth Addepalli, Xiaokai Cui

Database J. Biol. Databases Curation, 2019

2018

Design of a generic, open platform for machine learning-assisted indexing and clustering of articles in PubMed, a biomedical bibliographic database.

Neil R. Smalheiser, Aaron M. Cohen

Data Inf. Manag., 2018

Unsupervised Low-Dimensional Vector Representations for Words, Phrases and Text that are Transparent, Scalable, and produce Similarity Metrics that are Complementary to Neural Embeddings.

Neil R. Smalheiser, Gary Bonifield

CoRR, 2018

A probabilistic automated tagger to identify human-related publications.

Aaron M. Cohen, Zackary O. Dunivin, Neil R. Smalheiser

Database J. Biol. Databases Curation, 2018

OHSU CLEF 2018 Task 2 Diagnostic Test Accuracy Ranking using Publication Type Cluster Similarity Measures.

Aaron M. Cohen, Neil R. Smalheiser

Proceedings of the Working Notes of CLEF 2018, 2018

Methods and Tools to Enhance Rigor and Reproducibility of Biomedical Research.

Halil Kilicoglu, Aurélie Névéol, Timothy Clark, Hua Xu, Neil R. Smalheiser

Proceedings of the AMIA 2018, 2018

2017

Call for Papers! Special Issue on Models of Discovery: Mining the Scientific Literature.

Neil R. Smalheiser, Aaron M. Cohen

J. Data Inf. Sci., 2017

Rediscovering Don Swanson: The Past, Present and Future of Literature-based Discovery.

Neil R. Smalheiser

J. Data Inf. Sci., 2017

Identifying reports of randomized controlled trials (RCTs) via a hybrid machine learning and crowdsourcing approach.

Byron C. Wallace, Anna Noel-Storr, Iain James Marshall, Aaron M. Cohen, Neil R. Smalheiser, James Thomas

J. Am. Medical Informatics Assoc., 2017

Gaps within the Biomedical Literature: Initial Characterization and Assessment of Strategies for Discovery.

Yufang Peng, Gary Bonifield, Neil R. Smalheiser

Frontiers Res. Metrics Anal., 2017

Predicting MeSH Beyond MEDLINE.

Adam K. Kehoe, Vetle I. Torvik, Matthew B. Ross, Neil R. Smalheiser

Proceedings of the 1st Workshop on Scholarly Web Mining, 2017

2015

Automated confidence ranked classification of randomized controlled trial articles: an aid to evidence-based medicine.

Aaron M. Cohen, Neil R. Smalheiser, Marian S. McDonagh, Clement T. Yu, Clive E. Adams, John M. Davis, Philip S. Yu

J. Am. Medical Informatics Assoc., 2015

ClinicalTrials.gov: Adding Value through Informatics.

Vojtech Huser, Alexa T. McCray, Neil R. Smalheiser, Asba Tasneem, Chunhua Weng

Proceedings of the AMIA 2015, 2015

2014

Design and implementation of Metta, a metasearch engine for biomedical literature retrieval intended for systematic reviewers.

Neil R. Smalheiser, Can Lin, Lifeng Jia, Yu Jiang, Aaron M. Cohen, Clement T. Yu, John M. Davis, Clive E. Adams, Marian S. McDonagh, Weiyi Meng

Health Inf. Sci. Syst., 2014

Rule-based deduplication of article records from bibliographic databases.

Yu Jiang, Can Lin, Weiyi Meng, Clement T. Yu, Aaron M. Cohen, Neil R. Smalheiser

Database J. Biol. Databases Curation, 2014

2012

Literature-based discovery: Beyond the ABCs.

Neil R. Smalheiser

J. Assoc. Inf. Sci. Technol., 2012

A framework for entity resolution with efficient blocking.

Liangcai Shu, Can Lin, Weiyi Meng, Yue Han, Clement T. Yu, Neil R. Smalheiser

Proceedings of the IEEE 13th International Conference on Information Reuse & Integration, 2012

2011

Editorial for Special Issue: ACM IHI 2010 Best Papers.

Henrique Andrade, Neil R. Smalheiser

J. Medical Syst., 2011

Distribution of "Characteristic" Terms in MEDLINE Literatures.

Neil R. Smalheiser, Wei Zhou, Vetle I. Torvik

Inf., 2011

2010

Evidence-based medicine, the essential role of systematic reviews, and the need for automated text mining tools.

Aaron M. Cohen, Clive E. Adams, John M. Davis, Clement T. Yu, Philip S. Yu, Weiyi Meng, Lorna Duggan, Marian McDonagh, Neil R. Smalheiser

Proceedings of the ACM International Health Informatics Symposium, 2010

2009

Author name disambiguation in MEDLINE.

Vetle I. Torvik, Neil R. Smalheiser

ACM Trans. Knowl. Discov. Data, 2009

Arrowsmith two-node search interface: A tutorial on finding meaningful links between two disparate sets of articles in MEDLINE.

Neil R. Smalheiser, Vetle I. Torvik, Wei Zhou

Comput. Methods Programs Biomed., 2009

Author name disambiguation.

Neil R. Smalheiser, Vetle I. Torvik

Annu. Rev. Inf. Sci. Technol., 2009

Beyond (simple) reading: Strategies, discoveries, and collaborations.

Vetle I. Torvik, Allen H. Renear, Neil R. Smalheiser, Catherine C. Marshall

Proceedings of the Thriving on Diversity: Information Opportunities in a Pluralistic World, 2009

2007

A quantitative model for linking two disparate sets of articles in MEDLINE.

Vetle I. Torvik, Neil R. Smalheiser

Bioinform., 2007

Knowledge-intensive conceptual retrieval and passage extraction of biomedical literature.

Wei Zhou, Clement T. Yu, Neil R. Smalheiser, Vetle I. Torvik, Jie Hong

Proceedings of the SIGIR 2007: Proceedings of the 30th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, 2007

2006

Ranking indirect connections in literature-based discovery: The role of medical subject headings.

Don R. Swanson, Neil R. Smalheiser, Vetle I. Torvik

J. Assoc. Inf. Sci. Technol., 2006

ADAM: another database of abbreviations in MEDLINE.

Wei Zhou, Vetle I. Torvik, Neil R. Smalheiser

Bioinform., 2006

A Concept-Based Framework for Passage Retrieval at Genomics.

Wei Zhou, Clement T. Yu, Vetle I. Torvik, Neil R. Smalheiser

Proceedings of the Fifteenth Text REtrieval Conference, 2006

Segmentation of Publication Records of Authors from the Web.

Wei Zhang, Clement T. Yu, Neil R. Smalheiser, Vetle I. Torvik

Proceedings of the 22nd International Conference on Data Engineering, 2006

2005

A probabilistic similarity metric for Medline records: A model for author name disambiguation.

Vetle I. Torvik, Marc Weeber, Don R. Swanson, Neil R. Smalheiser

J. Assoc. Inf. Sci. Technol., 2005

Erratum to publisher.

Neil R. Smalheiser

J. Assoc. Inf. Sci. Technol., 2005

The Arrowsmith Project: 2005 Status Report.

Neil R. Smalheiser

Proceedings of the Discovery Science, 8th International Conference, 2005

2004

A population-based statistical approach identifies parameters characteristic of human microRNA-mRNA interactions.

Neil R. Smalheiser, Vetle I. Torvik

BMC Bioinform., 2004

2003

Towards effective and rewarding data sharing.

Daniel Gardner, Arthur W. Toga, Giorgio A. Ascoli, Jackson T. Beatty, James F. Brinkley, Anders M. Dale, Peter T. Fox, Esther P. Gardner, John S. George, Nigel H. Goddard, Kristen M. Harris, Edward Herskovits, Michael L. Hines, Gwen A. Jacobs, Russell E. Jacobs, Edward G. Jones, David N. Kennedy, Daniel Y. Kimberg, John C. Mazziotta, Perry L. Miller, Susumu Mori, David C. Mountain, Allan L. Reiss, Glenn D. Rosen, David A. Rottenberg, Gordon M. Shepherd, Neil R. Smalheiser, Kenneth P. Smith, Tom Strachan, David C. Van Essen, Robert W. Williams, Stephen T. C. Wong

Neuroinformatics, 2003

Literature-based discovery: New trends and techniques. Sponsored by SIG HCI.

Neil R. Smalheiser, Carole L. Palmer, Don R. Swanson, Padmini Srinivasan, Marti A. Hearst

Proceedings of the Humanizing Information Technology: From Ideas to Bits and Back, 2003

2001

Information discovery from complementary literatures: Categorizing viruses as potential weapons.

Don R. Swanson, Neil R. Smalheiser, Abraham Bookstein

J. Assoc. Inf. Sci. Technol., 2001

1999

Implicit Text Linkages between Medline Records: Using Arrowsmith as an Aid to Scientific Discovery.

Don R. Swanson, Neil R. Smalheiser

Libr. Trends, 1999

1997

An Interactive System for Finding Complementary Literatures: A Stimulus to Scientific Discovery.

Don R. Swanson, Neil R. Smalheiser

Artif. Intell., 1997

1996

Undiscovered Public Knowledge: A Ten-Year Update.

Don R. Swanson, Neil R. Smalheiser

Proceedings of the Second International Conference on Knowledge Discovery and Data Mining (KDD-96), 1996