Perry L. Miller

According to our database1, Perry L. Miller authored at least 103 papers between 1983 and 2017.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.



In proceedings 
PhD thesis 




Utilizing patient data from the veterans administration electronic health record to support web-based clinical decision support: informatics challenges and issues from three clinical domains.
BMC Med. Inf. & Decision Making, 2017

Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience.
Journal of Computational Neuroscience, 2017

YPED: An Integrated Bioinformatics Suite and Database for Mass Spectrometry-based Proteomics Research.
Genom. Proteom. Bioinform., 2015

Laplacian SVM Based Feature Selection Improves Medical Event Reports Classification.
Proceedings of the IEEE International Conference on Data Mining Workshop, 2015

Feature Selection Based LapSVM to Classify Medical Event Reports and Enhance Patient Safety.
Proceedings of the AMIA 2015, 2015

Using the Adverse Event Reporting System: Can Analysis be Streamlined by Text Processing?
Proceedings of the AMIA 2015, 2015

Automating Identification of OEF/OIF Veterans Diagnosed with ALS.
Proceedings of the AMIA 2015, 2015

SenseLab: Integration of Multidisciplinary Neuroscience Data.
Proceedings of the Encyclopedia of Computational Neuroscience, 2014

Extending the NIF DISCO framework to automate complex workflow: coordinating the harvest and integration of data from diverse neuroscience information resources.
Frontiers Neuroinformatics, 2014

Training the Informatics Research Workforce, Part 2.
Proceedings of the AMIA 2013, 2013

Towards a Clinically Efficient Model for Clinical Decision Support Linked to the VA EMR: A Pilot System for Neuropathic Pain.
Proceedings of the AMIA 2012, 2012

The NIF DISCO Framework: Facilitating Automated Integration of Neuroscience Content on the Web.
Neuroinformatics, 2010

Semantic SenseLab: Implementing the vision of the Semantic Web in neuroscience.
Artif. Intell. Medicine, 2010

Approaches to neuroscience data integration.
Briefings Bioinform., 2009

Entrez Neuron RDFa: A Pragmatic Semantic Web Application for Data Integration in Neuroscience Research.
Proceedings of the Medical Informatics in a United and Healthy Europe - Proceedings of MIE 2009, The XXIInd International Congress of the European Federation for Medical Informatics, Sarajevo, Bosnia and Herzegovina, August 30, 2009

Issues in the Design of a Pilot Concept-Based Query Interface for the Neuroinformatics Information Framework.
Neuroinformatics, 2008

The NIF LinkOut Broker: A Web Resource to Facilitate Federated Data Integration using NCBI Identifiers.
Neuroinformatics, 2008

Federated Access to Heterogeneous Information Resources in the Neuroscience Information Framework (NIF).
Neuroinformatics, 2008

The Neuroscience Information Framework: A Data and Knowledge Environment for Neuroscience.
Neuroinformatics, 2008

OdorMapComparer: An Application for Quantitative Analyses and Comparisons of fMRI Brain Odor Maps.
Neuroinformatics, 2007

An interdepartmental Ph.D. program in computational biology and bioinformatics: The Yale perspective.
J. Biomed. Informatics, 2007

Integrating domain knowledge with statistical and data mining methods for high-density genomic SNP disease association analysis.
J. Biomed. Informatics, 2007

Case Report: NeuroExtract: Facilitating Neuroscience-oriented Retrieval from Broadly-focused Bioscience Databases Using Text-based Query Mediation.
J. Am. Medical Informatics Assoc., 2007

Application of Information Technology: Dynamic Tables: An Architecture for Managing Evolving, Heterogeneous Biomedical Data in Relational Database Management Systems.
J. Am. Medical Informatics Assoc., 2007

AlzPharm: integration of neurodegeneration data using RDF.
BMC Bioinform., 2007

SenseLab: new developments in disseminating neuroscience information.
Briefings Bioinform., 2007

Application of Information Technology: ResourceLog: An Embeddable Tool for Dynamically Monitoring the Usage of Web-Based Bioscience Resources.
J. Am. Medical Informatics Assoc., 2006

Using Web Ontology Language to Integrate Heterogeneous Databases in the Neurosciences.
Proceedings of the AMIA 2006, 2006

Case Report: A High Productivity/Low Maintenance Approach to High-performance Computation for Biomedicine: Four Case Studies.
J. Am. Medical Informatics Assoc., 2005

YPED: A Proteomics Database for Protein Expression Analysis.
Proceedings of the AMIA 2005, 2005

Informatics approaches to functional MRI odor mapping of the rodent olfactory bulb - OdorMapBuilder and OdorMapDB.
Neuroinformatics, 2004

KARMA: a web server application for comparing and annotating heterogeneous microarray platforms.
Nucleic Acids Res., 2004

Case Report: Exploring the Portability of Informatics Capabilities from a Clinical Application to a Bioscience Application.
J. Am. Medical Informatics Assoc., 2004

Model Formulation: QIS: A Framework for Biomedical Database Federation.
J. Am. Medical Informatics Assoc., 2004

White Paper: Training the Next Generation of Informaticians: The Impact of "BISTI" and Bioinformatics - A Report from the American College of Medical Informatics.
J. Am. Medical Informatics Assoc., 2004

Towards effective and rewarding data sharing.
Neuroinformatics, 2003

Neuroscience data and tool sharing - A legal and policy framework for neuroinformatics.
Neuroinformatics, 2003

Text mining neuroscience journal articles to populate neuroscience databases.
Neuroinformatics, 2003

ALFRED: the ALelle FREquency Database. Update.
Nucleic Acids Res., 2003

Application of Information Technology: Achieving Evolvable Web-Database Bioscience Applications Using the EAV/CR Framework: Recent Advances.
J. Am. Medical Informatics Assoc., 2003

Creating Knowledgebases to Text-Mine PUBMED Articles Using Clustering Techniques.
Proceedings of the AMIA 2003, 2003

The Integration of Similar Clinical Research Data Collection Instruments.
Proceedings of the AMIA 2003, 2003

TrialDB: A Web-based Clinical Study Data Management System AMIA 2003 Open Source Expo.
Proceedings of the AMIA 2003, 2003

The TRIPLES database: a community resource for yeast molecular biology.
Nucleic Acids Res., 2002

Olfactory Receptor Database: a metadata-driven automated population from sources of gene and protein sequences.
Nucleic Acids Res., 2002

A dynamic approach to mapping coordinates between microplates and microarrays.
J. Biomed. Informatics, 2002

Case Study: Exploring Issues of Quality of Service in a Next Generation Internet Testbed: A Case Study Using PathMaster.
J. Am. Medical Informatics Assoc., 2002

Metadata-driven creation of data marts from an EAV-modeled clinical research database.
Int. J. Medical Informatics, 2002

ALFRED: an allele frequency database for diverse populations and DNA polymorphisms - an update.
Nucleic Acids Res., 2001

Maintaining and Incrementally Revalidating a Computer-Based Clinical Guideline: A Case Study.
J. Biomed. Informatics, 2001

Exploring the Utility of Demographic Data and Vaccination History Data in the Deduplication of Immunization Registry Patient Records.
J. Biomed. Informatics, 2001

Synthesis of Research: Integration of Multidisciplinary Sensory Data: A Pilot Model of the Human Brain Project Approach.
J. Am. Medical Informatics Assoc., 2001

Application of Information Technology: Domain-constrained Generation of Clinical Condition Sets to Help Test Computer-based Clinical Guidelines.
J. Am. Medical Informatics Assoc., 2001

An XML Application For Genomic Data Interoperation.
Proceedings of the 2nd IEEE International Symposium on Bioinformatics and Bioengineering, 2001

A Pilot Approach to Automated and Efficient Transfer of Neuroscience Data from Journal Articles to Searchable Databases.
Proceedings of the AMIA 2001, 2001

A metadata framework for interoperating heterogeneous genome data using XML.
Proceedings of the AMIA 2001, 2001

Olfactory Receptor Database: a sensory chemoreceptor resource.
Nucleic Acids Res., 2000

TRIPLES: a database of gene function in Saccharomyces cerevisiae.
Nucleic Acids Res., 2000

ALFRED: an allele frequency database for diverse populations and DNA polymorphisms.
Nucleic Acids Res., 2000

IMM/Scrub: A Domain-Specific Tool for the Deduplication of Vaccination History Records in Childhood Immunization Registries.
Comput. Biomed. Res., 2000

Research Paper: Exploring the Degree of Concordance of Coded and Textual Data in Answering Clinical Queries from a Clinical Data Repository.
J. Am. Medical Informatics Assoc., 2000

Viewpoint: Opportunities at the Intersection of Bioinformatics and Health Informatics: A Case Study.
J. Am. Medical Informatics Assoc., 2000

Research Paper: PathMaster: Content-based Cell Image Retrieval Using Automated Feature Extraction.
J. Am. Medical Informatics Assoc., 2000

Research Paper: Exploring Performance Issues for a Clinical Database Organized Using an Entity-Attribute-Value Representation.
J. Am. Medical Informatics Assoc., 2000

Informatics issues in the national dissemination of a computer-based clinical guideline: a case study in childhood immunization.
Proceedings of the AMIA 2000, 2000

The SenseLab Database: System Design Towards Interoperability.
Proceedings of the AMIA 2000, 2000

Graphically-enabled integration of bioinformatics tools allowing parallel execution.
Proceedings of the AMIA 2000, 2000

Olfactory Receptor Database: a database of the largest eukaryotic gene family.
Nucleic Acids Res., 1999

Application of Information Technology: Organization of Heterogeneous Scientific Data Using the EAV/CR Representation.
J. Am. Medical Informatics Assoc., 1999

Exploring three approaches for handling incomplete patient histories in a computer-based guideline for childhood immunization.
Proceedings of the AMIA 1999, 1999

Demonstration of TrialTracker: A Customizable Database for Managing Administrative Data for Clinical Trials.
Proceedings of the AMIA 1999, 1999

Neuronal database integration: the Senselab EAV data model.
Proceedings of the AMIA 1999, 1999

Issues in Implementing a Guideline for Depression Modeled Using an Object-Oriented State Machine.
Proceedings of the AMIA 1999, 1999

Application of Technology: Managing Attribute-Value Clinical Trials Data Using the ACT/DB Client-Server Database System.
J. Am. Medical Informatics Assoc., 1998

Acquiring, Storing and Retrieving Diverse Biomedical Data Using the World-Wide-Web: The SenseLab Paradigm.
Proceedings of the AMIA 1998, 1998

Issues in accommodating national changes and local variation in a computer-based guideline for childhood immunization and in related knowledge maintenance tools.
Proceedings of the AMIA 1998, 1998

Automatic query mapping among genomic databases: a pilot exploration.
Proceedings of the AMIA 1998, 1998

ACT/DB: A Clinical Trials Database Being Refined on a Pilot Basis at Two Medical Centers.
Proceedings of the AMIA 1998, 1998

Research Paper: Evaluating IAIMS at Yale: Information Access.
J. Am. Medical Informatics Assoc., 1997

Using explicitly represented biological relationships for database navigation and searching via the World-Wide Web.
Comput. Appl. Biosci., 1997

Demonstration of Computer-Based Forecasting for Childhood Immunization and Related Knowledge Maintenance Tools.
Proceedings of the AMIA 1997, 1997

A prototype Web site for immunization knowledge maintenance.
Proceedings of the AMIA 1997, 1997

Toward the Systematic Maintenance of Different Versions of Rule-Based Immunization Guideline Logic.
Proceedings of the AMIA 1997, 1997

Using Coded Semantic Relationships to Retrieve and Structure Clinical Reference Information.
Proceedings of the AMIA 1997, 1997

DNA Workbench: A Database Package to Manage Regional Physical Mapping.
J. Comput. Biol., 1996

Application of Technology: ModelDB: An Environment for Running and Storing Computational Models and Their Results Applied to Neuroscience.
J. Am. Medical Informatics Assoc., 1996

Research Paper: Portability Issues for a Structured Clinical Vocabulary: Mapping from Yale to the Columbia Medical Entities Dictionary.
J. Am. Medical Informatics Assoc., 1996

Application of Technology: Internet-based Support for Bioscience Research: A Collaborative Genome center for Human Chromosome 12.
J. Am. Medical Informatics Assoc., 1995

Research Paper: Lessons Learned from a Pilot Implementation of the UMLS Information Sources Map.
J. Am. Medical Informatics Assoc., 1995

Case Report: Trade-offs in Producing Patient-specific Recommendations from a Computer-based Clinical Guideline: A Case Study.
J. Am. Medical Informatics Assoc., 1995

Computer-assisted restriction mapping: an integrated approach to handling experimental uncertainty.
Comput. Appl. Biosci., 1994

Parallel Computation for Medicine and Biology: Applications of Linda At Yale University.
Int. J. High Perform. Comput. Appl., 1992

Comparing machine-independent versus machine-specific parallelization of a software platform for biological sequence comparison.
Comput. Appl. Biosci., 1992

Harnessing networked workstations as a powerful parallel computer: a general paradigm illustrated using three programs for genetic linkage analysis.
Comput. Appl. Biosci., 1992

Real-Time Data Fusion in the Intensive Care Unit.
IEEE Computer, 1991

Parallel computation and FASTA: confronting the problem of parallel database search for a fast sequence comparison algorithm.
Comput. Appl. Biosci., 1991

SENEX: a computer-based representation of cellular signal transduction processes in the central nervous system.
Comput. Appl. Biosci., 1991

A Computational Model of Reasoning from the Clinical Literature.
AI Magazine, 1989

Prose Generation from Expert Systems: An Applied Computational Linguistics Approach.
AI Magazine, 1988

Readings in Medical Artificial Intelligence: The First Decade (Book Review).
AI Magazine, 1986

ATTENDING: Critiquing a Physician's Management Plan.
IEEE Trans. Pattern Anal. Mach. Intell., 1983

Medical Plan-Analysis: The Attending System.
Proceedings of the 8th International Joint Conference on Artificial Intelligence. Karlsruhe, 1983