Osman Ugur Sezerman

Orcid: 0000-0003-0905-6783

According to our database1, Osman Ugur Sezerman authored at least 32 papers between 2004 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2023
PANACEA: network-based methods for pharmacotherapy prioritization in personalized oncology.
Bioinform., January, 2023

2021
CogNet: classification of gene expression data based on ranked active-subnetwork-oriented KEGG pathway enrichment analysis.
PeerJ Comput. Sci., 2021

A framework for validating AI in precision medicine: considerations from the European ITFoC consortium.
BMC Medical Informatics Decis. Mak., 2021

driveR: a novel method for prioritizing cancer driver genes using somatic genomics data.
BMC Bioinform., 2021

2018
Prediction of HIV Drug Resistance by Combining Sequence and Structural Properties.
IEEE ACM Trans. Comput. Biol. Bioinform., 2018

Thermostability of the PYL-PP2C Heterodimer Is Dependent on Magnesium: In Silico Insights into the Link between Heat Stress Response and Magnesium Deficiency in Plants.
J. Chem. Inf. Model., 2018

2017
ZK DrugResist 2.0: A TextMiner to extract semantic relations of drug resistance from PubMed.
J. Biomed. Informatics, 2017

2015
Prediction of neddylation sites from protein sequences and sequence-derived properties.
BMC Bioinform., December, 2015

2014
PANOGA: a web server for identification of SNP-targeted pathways from genome-wide association study data.
Bioinform., 2014

2013
Prediction of peptides binding to MHC class I and II alleles by temporal motif mining.
BMC Bioinform., 2013

Testing robustness of relative complexity measure method constructing robust phylogenetic trees for Galanthus L. Using the relative complexity measure.
BMC Bioinform., 2013

2012
Pattern Recognition for Subfamily Level Classification of GPCRs Using Motif Distillation and Distinguishing Power Evaluation.
Proceedings of the Pattern Recognition in Bioinformatics, 2012

Representation of Protein Secondary Structure Using Bond-Orientational Order Parameters.
Proceedings of the Pattern Recognition in Bioinformatics, 2012

2011
Classification of GPCRs Using Family Specific Motifs.
IEEE ACM Trans. Comput. Biol. Bioinform., 2011

2010
Biomarker discovery for toxicity.
Neurocomputing, 2010

Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets.
BMC Bioinform., 2010

2009
DockPro: A VR-Based Tool for Protein-Protein Docking Problem.
Int. J. Virtual Real., 2009

EnzyMiner: automatic identification of protein level mutations and their impact on target enzymes from PubMed abstracts.
BMC Bioinform., 2009

An Ariadne's thread to the identification and annotation of noncoding RNAs in eukaryotes.
Briefings Bioinform., 2009

Prediction of Peptides Binding to MHC Class I Alleles by Partial Periodic Pattern Mining.
Proceedings of the International Joint Conferences on Bioinformatics, 2009

An entropy based heuristic model for predicting functional sub-type divisions of protein families.
Proceedings of the Genetic and Evolutionary Computation Conference, 2009

Optimization of morphological data in numerical taxonomy analysis using genetic algorithms feature selection method.
Proceedings of the Genetic and Evolutionary Computation Conference, 2009

2008
Discovery of Biomarkers for Hexachlorobenzene Toxicity Using Population Based Methods on Gene Expression Data.
Proceedings of the Pattern Recognition in Bioinformatics, 2008

Discrimination of Native Folds Using Network Properties of Protein Structures.
Proceedings of the 6th Asia-Pacific Bioinformatics Conference, 2008

2007
Application of Automatic Mutation-gene Pair Extraction to Diseases.
J. Bioinform. Comput. Biol., 2007

Discrimination of proteins using graph theoretic properties.
BMC Syst. Biol., 2007

Evolutionary selection of minimum number of features for classification of gene expression data using genetic algorithms.
Proceedings of the Genetic and Evolutionary Computation Conference, 2007

Potential Use of Graph Theoretical Properties of Protein Structures in Structural Alignment.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007

2006
Modified Association Rule Mining Approach for the MHC-Peptide Binding Problem.
Proceedings of the Computer and Information Sciences, 2006

Prediction and Classification for GPCR Sequences Based on Ligand Specific Features.
Proceedings of the Computer and Information Sciences, 2006

Functional Classification of G-Protein Coupled Receptors, Based on Their Specific Ligand Coupling Patterns.
Proceedings of the Applications of Evolutionary Computing, 2006

2004
Protein Structural Class Determination Using Support Vector Machines.
Proceedings of the Computer and Information Sciences, 2004


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