Deniz Yörükoglu

According to our database, Deniz Yörükoglu authored at least 10 papers between 2008 and 2017.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of three.

2017

Scalable methods for storage, processing and analysis of sequencing datasets.

Deniz Yörükoglu

PhD thesis, 2017

2016

Fast genotyping of known SNPs through approximate <i>k</i>-mer matching.

Ariya Shajii, Deniz Yörükoglu, Yun William Yu, Bonnie Berger

Bioinform., 2016

2015

Topological Signatures for Population Admixture.

Laxmi Parida, Filippo Utro, Deniz Yörükoglu, Anna Paola Carrieri, David Kuhn, Saugata Basu

Proceedings of the Research in Computational Molecular Biology, 2015

HapTree-X: An Integrative Bayesian Framework for Haplotype Reconstruction from Transcriptome and Genome Sequencing Data.

Emily Berger, Deniz Yörükoglu, Bonnie Berger

Proceedings of the Research in Computational Molecular Biology, 2015

2014

HapTree: A Novel Bayesian Framework for Single Individual Polyplotyping Using NGS Data.

Emily Berger, Deniz Yörükoglu, Jian Peng, Bonnie Berger

PLoS Comput. Biol., 2014

Traversing the k-mer Landscape of NGS Read Datasets for Quality Score Sparsification.

Yun William Yu, Deniz Yörükoglu, Bonnie Berger

Proceedings of the Research in Computational Molecular Biology, 2014

2012

Dissect: detection and characterization of novel structural alterations in transcribed sequences.

Deniz Yörükoglu, Faraz Hach, Lucas Swanson, Colin C. Collins, Inanç Birol, Süleyman Cenk Sahinalp

Bioinform., 2012

2010

Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery.

Fereydoun Hormozdiari, Iman Hajirasouliha, Phuong Dao, Faraz Hach, Deniz Yörükoglu, Can Alkan, Evan E. Eichler, Süleyman Cenk Sahinalp

Bioinform., 2010

2009

An entropy based heuristic model for predicting functional sub-type divisions of protein families.

Deniz Yörükoglu, Yasin Bakis, Osman Ugur Sezerman

Proceedings of the Genetic and Evolutionary Computation Conference, 2009

2008

Discovery of Biomarkers for Hexachlorobenzene Toxicity Using Population Based Methods on Gene Expression Data.

Cem Meydan, Alper Küçükural, Deniz Yörükoglu, Osman Ugur Sezerman

Proceedings of the Pattern Recognition in Bioinformatics, 2008