Samuel Kerrien

According to our database, Samuel Kerrien authored at least 14 papers between 2004 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Blue Brain Nexus: An open, secure, scalable system for knowledge graph management and data-driven science.

Mohameth-François Sy, Bogdan Roman, Samuel Kerrien, Didac Montero Mendez, Henry Genet, Wojciech Wajerowicz, Michaël Dupont, Ian Lavriushev, Julien Machon, Kenneth Pirman, Dhanesh Neela Mana, Natalia Stafeeva, Anna-Kristin Kaufmann, Huanxiang Lu, Jonathan Lurie, Pierre-Alexandre Fonta, Alejandra Garcia Rojas Martinez, Alexander D. Ulbrich, Carolina Lindqvist, Silvia Jimenez, David J. Rotenberg, Henry Markram, Sean L. Hill

Semantic Web, 2023

Blue Brain Knowledge Graph: Leveraging Semantic Web Technologies for Simulation Neuroscience.

Cristina E. Gonzalez-Espinoza, Anna-Kristin Kaufmann, Eugenia Oshurko, Alejandra Garcia Rojas Martinez, Sarah Mouffok, Konstantinos Platis, Jonathan Lurie, Jayakrishnan Nair, Patrycja Lurie, Silvia Jimenez, Pierre-Alexandre Fonta, Huanxiang Lu, Nabil Alibou, Mohameth-François Sy, Bogdan Roman, Samuel Kerrien, Henry Markram, Sean L. Hill

Proceedings of the ISWC 2023 Posters, 2023

2013

Capturing cooperative interactions with the PSI-MI format.

Kim Van Roey, Sandra E. Orchard, Samuel Kerrien, Marine Dumousseau, Sylvie Ricard-Blum, Henning Hermjakob, Toby J. Gibson

Database J. Biol. Databases Curation, 2013

The Apoptosis Gene Ontology project and the IntAct-Apoptosis dataset: updating the conceptual representation of apoptosis.

Pablo Porras, Paola Roncaglia, Emily Dimmer, Jane Lomax, Rachael P. Huntley, Sandra E. Orchard, Marine Dumousseau, Samuel Kerrien, Henning Hermjakob

Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013

2012

The IntAct molecular interaction database in 2012.

Samuel Kerrien, Bruno Aranda, Lionel Breuza, Alan J. Bridge, Fiona Broackes-Carter, Carol Chen, Margaret J. Duesbury, Marine Dumousseau, Marc Feuermann, Ursula Hinz, Christine Jandrasits, Rafael C. Jiménez, Jyoti Khadake, Usha Mahadevan, Patrick Masson, Ivo Pedruzzi, Eric Pfeiffenberger, Pablo Porras, Arathi Raghunath, Bernd Roechert, Sandra E. Orchard, Henning Hermjakob

Nucleic Acids Res., 2012

2010

The IntAct molecular interaction database in 2010.

Bruno Aranda, P. Achuthan, Yasmin Alam-Faruque, Irina M. Armean, Alan J. Bridge, C. Derow, Marc Feuermann, A. T. Ghanbarian, Samuel Kerrien, Jyoti Khadake, Jules Kerssemakers, C. Leroy, Michael P. Menden, Magali Michaut, Luisa Montecchi-Palazzi, S. N. Neuhauser, Sandra E. Orchard, V. Perreau, Bernd Roechert, K. van Eijk, Henning Hermjakob

Nucleic Acids Res., 2010

Molecular Interactions and Data Standardisation.

Sandra E. Orchard, Samuel Kerrien

Proceedings of the Proteome Bioinformatics, 2010

2008

InteroPORC: an automated tool to predict highly conserved protein interaction networks.

Magali Michaut, Samuel Kerrien, Luisa Montecchi-Palazzi, Corinne Cassier-Chauvat, Franck Chauvat, Jean-Christophe Aude, Pierre Legrain, Henning Hermjakob

BMC Bioinform., 2008

InteroPORC: automated inference of highly conserved protein interaction networks.

Magali Michaut, Samuel Kerrien, Luisa Montecchi-Palazzi, Franck Chauvat, Corinne Cassier-Chauvat, Jean-Christophe Aude, Pierre Legrain, Henning Hermjakob

Bioinform., 2008

Rintact: enabling computational analysis of molecular interaction data from the IntAct repository.

Tony Chiang, Nianhua Li, Sandra E. Orchard, Samuel Kerrien, Henning Hermjakob, Robert Gentleman, Wolfgang Huber

Bioinform., 2008

2007

IntAct - open source resource for molecular interaction data.

Samuel Kerrien, Yasmin Alam-Faruque, Bruno Aranda, I. Bancarz, Alan J. Bridge, C. Derow, Emily Dimmer, Marc Feuermann, A. Friedrichsen, Rachael P. Huntley, C. Kohler, Jyoti Khadake, C. Leroy, A. Liban, C. Lieftink, Luisa Montecchi-Palazzi, Sandra E. Orchard, Judith E. Risse, Karine Robbe, Bernd Roechert, David Thorneycroft, Y. Zhang, Rolf Apweiler, Henning Hermjakob

Nucleic Acids Res., 2007

The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases.

Richard G. Côté, Philip Jones, Lennart Martens, Samuel Kerrien, Florian Reisinger, Quan Lin, Rasko Leinonen, Rolf Apweiler, Henning Hermjakob

BMC Bioinform., 2007

2006

Development and implementation of the PSI MI standard for molecular interaction.

Samuel Kerrien, Henning Hermjakob

Proceedings of the Winter Simulation Conference WSC 2006, 2006

2004

IntAct: an open source molecular interaction database.

Henning Hermjakob, Luisa Montecchi-Palazzi, Chris Lewington, Sugath Mudali, Samuel Kerrien, Sandra E. Orchard, Martin Vingron, Bernd Roechert, Peter Roepstorff, Alfonso Valencia, Hanah Margalit, John Armstrong, Amos Bairoch, Gianni Cesareni, David James Sherman, Rolf Apweiler

Nucleic Acids Res., 2004