Sandra E. Orchard

According to our database1, Sandra E. Orchard authored at least 41 papers between 2003 and 2022.

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Bibliography

2022
The IntAct database: efficient access to fine-grained molecular interaction data.
Nucleic Acids Res., 2022

Complex Portal 2022: new curation frontiers.
Nucleic Acids Res., 2022

2021
The Gene Ontology resource: enriching a GOld mine.
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Nucleic Acids Res., 2021

UniProt: the universal protein knowledgebase in 2021.
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Nucleic Acids Res., 2021

The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST).
Bioinform., 2021

UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase.
Bioinform., 2021

Gene Ontology curation of the blood-brain barrier to improve the analysis of Alzheimer's and other neurological diseases.
Database J. Biol. Databases Curation, 2021

2020
The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences.
Bioinform., 2020

The IMEx coronavirus interactome: an evolving map of Coronaviridae-host molecular interactions.
Database J. Biol. Databases Curation, 2020

2019
Complex Portal 2018: extended content and enhanced visualization tools for macromolecular complexes.
Nucleic Acids Res., 2019

CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination.
Bioinform., 2019

Integration of macromolecular complex data into the Saccharomyces Genome Database.
Database J. Biol. Databases Curation, 2019

2018
JAMI: a Java library for molecular interactions and data interoperability.
BMC Bioinform., 2018

Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions.
BMC Bioinform., 2018

2017
ComplexViewer: visualization of curated macromolecular complexes.
Bioinform., 2017

2016
Overview of the interactive task in BioCreative V.
Database J. Biol. Databases Curation, 2016

Gene regulation knowledge commons: community action takes care of DNA binding transcription factors.
Database J. Biol. Databases Curation, 2016

2015
The complex portal - an encyclopaedia of macromolecular complexes.
Nucleic Acids Res., 2015

Development of data representation standards by the human proteome organization proteomics standards initiative.
J. Am. Medical Informatics Assoc., 2015

Merging and scoring molecular interactions utilising existing community standards: tools, use-cases and a case study.
Database J. Biol. Databases Curation, 2015

Shared resources, shared costs - leveraging biocuration resources.
Database J. Biol. Databases Curation, 2015

The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations.
Database J. Biol. Databases Curation, 2015

2014
The MIntAct project - IntAct as a common curation platform for 11 molecular interaction databases.
Nucleic Acids Res., 2014

2013
A new reference implementation of the PSICQUIC web service.
Nucleic Acids Res., 2013

BioJS: an open source JavaScript framework for biological data visualization.
Bioinform., 2013

Capturing cooperative interactions with the PSI-MI format.
Database J. Biol. Databases Curation, 2013

The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary.
Database J. Biol. Databases Curation, 2013

The Apoptosis Gene Ontology project and the IntAct-Apoptosis dataset: updating the conceptual representation of apoptosis.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013

2012
The IntAct molecular interaction database in 2012.
Nucleic Acids Res., 2012

2011
Towards BioDBcore: a community-defined information specification for biological databases.
Database J. Biol. Databases Curation, 2011

2010
The IntAct molecular interaction database in 2010.
Nucleic Acids Res., 2010

Molecular Interactions and Data Standardisation.
Proceedings of the Proteome Bioinformatics, 2010

2008
The Protein Feature Ontology: a tool for the unification of protein feature annotations.
Bioinform., 2008

Rintact: enabling computational analysis of molecular interaction data from the IntAct repository.
Bioinform., 2008

The HUPO proteomics standards initiative - easing communication and minimizing data loss in a changing world.
Briefings Bioinform., 2008

2007
New developments in the InterPro database.
Nucleic Acids Res., 2007

IntAct - open source resource for molecular interaction data.
Nucleic Acids Res., 2007

2005
InterPro, progress and status in 2005.
Nucleic Acids Res., 2005

The Use of Common Ontologies and Controlled Vocabularies to Enable Data Exchange and Deposition for Complex Proteomic Experiments.
Proceedings of the Biocomputing 2005, 2005

2004
IntAct: an open source molecular interaction database.
Nucleic Acids Res., 2004

2003
The InterPro Database, 2003 brings increased coverage and new features.
Nucleic Acids Res., 2003


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