Philip Jones

According to our database, Philip Jones authored at least 28 papers between 2001 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Harnessing Extreme Heterogeneity for Ocean Modeling with Tensors.

Li Tang, Philip Jones, Scott Pakin

Proceedings of the 2nd International Workshop on Extreme Heterogeneity Solutions, 2023

2022

High-order multirate explicit time-stepping schemes for the baroclinic-barotropic split dynamics in primitive equations.

Rihui Lan, Lili Ju, Zhu Wang, Max D. Gunzburger, Philip Jones

J. Comput. Phys., 2022

8-bit Numerical Formats for Deep Neural Networks.

Badreddine Noune, Philip Jones, Daniel Justus, Dominic Masters, Carlo Luschi

CoRR, 2022

2020

Pykat: Python package for modelling precision optical interferometers.

Daniel D. Brown, Philip Jones, Samuel Rowlinson, Sean Leavey, Anna C. Green, Daniel Töyrä, Andreas Freise

SoftwareX, 2020

2019

Practical Application of a Data Stewardship Maturity Matrix for the NOAA <i>OneStop</i> Project.

Ge Peng, Anna Milan, Nancy A. Ritchey, Robert P. Partee II, Sonny Zinn, Evan McQuinn, Kenneth S. Casey, Paul Lemieux III, Raisa Ionin, Philip Jones, Arianna Jakositz, Donald Collins

Data Sci. J., 2019

Sea Ice Climate Normals for Seasonal Ice Monitoring of Arctic and Sub-Regions.

Ge Peng, Anthony Arguez, Walter N. Meier, Freja Vamborg, Jake Crouch, Philip Jones

Data, 2019

2016

Scientific Stewardship in the Open Data and Big Data Era - Roles and Responsibilities of Stewards and Other Major Product Stakeholders.

Ge Peng, Nancy A. Ritchey, Kenneth S. Casey, Edward J. Kearns, Jeffrey L. Privette, Drew Saunders, Philip Jones, Tom Maycock, Steve Ansari

D Lib Mag., 2016

2014

EBI metagenomics - a new resource for the analysis and archiving of metagenomic data.

Sarah Hunter, Matthew Corbett, Hubert Denise, Matthew Fraser, Alejandra N. González-Beltrán, Christopher I. Hunter, Philip Jones, Rasko Leinonen, Craig McAnulla, Eamonn Maguire, John Maslen, Alex L. Mitchell, Gift Nuka, Arnaud Oisel, Sebastien Pesseat, Rajesh Radhakrishnan, Philippe Rocca-Serra, Maxim Scheremetjew, Peter Sterk, Daniel Vaughan, Guy Cochrane, Dawn Field, Susanna-Assunta Sansone

Nucleic Acids Res., 2014

InterProScan 5: genome-scale protein function classification.

Philip Jones, David Binns, Hsin-Yu Chang, Matthew Fraser, Weizhong Li, Craig McAnulla, Hamish McWilliam, John Maslen, Alex L. Mitchell, Gift Nuka, Sebastien Pesseat, Antony F. Quinn, Amaia Sangrador-Vegas, Maxim Scheremetjew, Siew-Yit Yong, Rodrigo Lopez, Sarah Hunter

Bioinform., 2014

2012

InterPro in 2011: new developments in the family and domain prediction database.

Sarah Hunter, Philip Jones, Alex L. Mitchell, Rolf Apweiler, Teresa K. Attwood, Alex Bateman, Thomas Bernard, David Binns, Peer Bork, Sarah W. Burge, Edouard De Castro, Penny C. Coggill, Matthew Corbett, Ujjwal Das, Louise C. Daugherty, Lauranne Duquenne, Robert D. Finn, Matthew Fraser, Julian Gough, Daniel H. Haft, Nicolas Hulo, Daniel Kahn, Elizabeth Kelly, Ivica Letunic, David Lonsdale, Rodrigo Lopez, Martin Madera, John Maslen, Craig McAnulla, Jennifer McDowall, Conor McMenamin, Huaiyu Mi, Prudence Mutowo-Meullenet, Nicola J. Mulder, Darren A. Natale, Christine A. Orengo, Sebastien Pesseat, Marco Punta, Antony F. Quinn, Catherine Rivoire, Amaia Sangrador-Vegas, Jeremy D. Selengut, Christian J. A. Sigrist, Maxim Scheremetjew, John G. Tate, Manjulapramila Thimmajanarthanan, Paul D. Thomas, Cathy H. Wu, Corin Yeats, Siew-Yit Yong

Nucleic Acids Res., 2012

Bioinformatics Training Network (BTN): a community resource for bioinformatics trainers.

Maria Victoria Schneider, Peter Walter, Marie-Claude Blatter, James Watson, Michelle D. Brazas, Kristian Rother, Aidan Budd, Allegra Via, Celia W. G. van Gelder, Joachim Jacob, Pedro L. Fernandes, Tommi H. Nyrönen, Javier De Las Rivas, Thomas Blicher, Rafael C. Jiménez, Jane E. Loveland, Jennifer McDowall, Philip Jones, Brendan W. Vaughan, Rodrigo Lopez, Teresa K. Attwood, Catherine Brooksbank

Briefings Bioinform., 2012

Metagenomic analysis: the challenge of the data bonanza.

Chris I. Hunter, Alex L. Mitchell, Philip Jones, Craig McAnulla, Sebastien Pesseat, Maxim Scheremetjew, Sarah Hunter

Briefings Bioinform., 2012

2011

The InterPro BioMart: federated query and web service access to the InterPro Resource.

Philip Jones, David Binns, Conor McMenamin, Craig McAnulla, Sarah Hunter

Database J. Biol. Databases Curation, 2011

BioMart Central Portal: an open database network for the biological community.

Jonathan M. Guberman, Jiye Ai, Olivier Arnaiz, Joachim Baran, Andrew Blake, Richard A. Baldock, Claude Chelala, David Croft, Anthony Cros, Rosalind J. Cutts, Alex Di Génova, Simon A. Forbes, Takatomo Fujisawa, Emanuela Gadaleta, David M. Goodstein, Gunes Gundem, Bernard Haggarty, Syed Haider, Matthew Hall, Todd W. Harris, Robin Haw, Shen Hu, Simon J. Hubbard, Jack Hsu, Vivek Iyer, Philip Jones, Toshiaki Katayama, Rhoda Kinsella, Lei Kong, Daniel Lawson, Yong Liang, Núria López-Bigas, Jie Luo, Michael J. Lush, Jeremy C. Mason, François Moreews, Nelson Ndegwa, Darren J. Oakley, Christian Perez-Llamas, Michael Primig, Elena Rivkin, Steven Rosanoff, Rebecca Shepherd, Reinhard Simon, William C. Skarnes, Damian Smedley, Linda Sperling, William Spooner, Peter Stevenson, Kevin R. Stone, Jon W. Teague, Jun Wang, Jianxin Wang, Brett Whitty, David Tai Wai Wong, Marie Wong-Erasmus, Long Yao, Ken Youens-Clark, Christina K. Yung, Junjun Zhang, Arek Kasprzyk

Database J. Biol. Databases Curation, 2011

2010

Bioinformatics training: a review of challenges, actions and support requirements.

Maria Victoria Schneider, James Watson, Teresa K. Attwood, Kristian Rother, Aidan Budd, Jennifer McDowall, Allegra Via, Pedro L. Fernandes, Tommi H. Nyrönen, Thomas Blicher, Philip Jones, Marie-Claude Blatter, Javier De Las Rivas, David Phillip Judge, Wouter van der Gool, Catherine Brooksbank

Briefings Bioinform., 2010

Using the PRIDE Proteomics Identifications Database for Knowledge Discovery and Data Analysis.

Philip Jones, Lennart Martens

Proceedings of the Proteome Bioinformatics, 2010

2008

ISPIDER Central: an integrated database web-server for proteomics.

Jennifer A. Siepen, Khalid Belhajjame, Julian N. Selley, Suzanne M. Embury, Norman W. Paton, Carole A. Goble, Stephen G. Oliver, Robert Stevens, Lucas Zamboulis, Nigel J. Martin, Alexandra Poulovassilis, Philip Jones, Richard G. Côté, Henning Hermjakob, Melissa M. Pentony, David T. Jones, Christine A. Orengo, Simon J. Hubbard

Nucleic Acids Res., 2008

PRIDE: new developments and new datasets.

Philip Jones, Richard G. Côté, Sang Yun Cho, Sebastian Klie, Lennart Martens, Antony F. Quinn, David Thorneycroft, Henning Hermjakob

Nucleic Acids Res., 2008

The Ontology Lookup Service: more data and better tools for controlled vocabulary queries.

Richard G. Côté, Philip Jones, Lennart Martens, Rolf Apweiler, Henning Hermjakob

Nucleic Acids Res., 2008

Integrating biological data - the Distributed Annotation System.

Andrew M. Jenkinson, Mario Albrecht, Ewan Birney, Hagen Blankenburg, Thomas A. Down, Robert D. Finn, Henning Hermjakob, Tim J. P. Hubbard, Rafael C. Jiménez, Philip Jones, Andreas Kähäri, Eugene Kulesha, José R. Macías, Gabrielle A. Reeves, Andreas Prlic

BMC Bioinform., 2008

2007

Pride Wizard: generation of standards compliant quantitative proteomics data.

Neil Swainston, Jennifer A. Siepen, Andrew R. Jones, Sarah R. Hart, Henning Hermjakob, Philip Jones, Simon J. Hubbard

BMC Syst. Biol., 2007

The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases.

Richard G. Côté, Philip Jones, Lennart Martens, Samuel Kerrien, Florian Reisinger, Quan Lin, Rasko Leinonen, Rolf Apweiler, Henning Hermjakob

BMC Bioinform., 2007

Analysing latent topics in large-scale proteomics.

Sebastian Klie, Alexander Hinneburg, Lennart Martens, Juan Antonio Vizcaíno, Richard G. Côté, Philip Jones, Rolf Apweiler, Henning Hermjakob

Proceedings of the LWA 2007: Lernen - Wissen, 2007

An Application of Latent Topic Document Analysis to Large-Scale Proteomics Databases.

Sebastian Klie, Lennart Martens, Juan Antonio Vizcaíno, Richard G. Côté, Philip Jones, Rolf Apweiler, Alexander Hinneburg, Henning Hermjakob

Proceedings of the German Conference on Bioinformatics, 2007

2006

PRIDE: a public repository of protein and peptide identifications for the proteomics community.

Philip Jones, Richard G. Côté, Lennart Martens, Antony F. Quinn, Chris F. Taylor, William Derache, Henning Hermjakob, Rolf Apweiler

Nucleic Acids Res., 2006

The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries.

Richard G. Côté, Philip Jones, Rolf Apweiler, Henning Hermjakob

BMC Bioinform., 2006

2005

Dasty and UniProt DAS: a perfect pair for protein feature visualization.

Philip Jones, Nisha Vinod, Thomas A. Down, Andre Hackmann, Andreas Kähäri, Ernst Kretschmann, Antony F. Quinn, Daniela Wieser, Henning Hermjakob, Rolf Apweiler

Bioinform., 2005

2001

Measuring the efficiency of stochastic signals of product quality.

John Hudson, Philip Jones

Inf. Econ. Policy, 2001