Kathleen Marchal
Orcid: 0000-0002-2169-4588
According to our database1,
Kathleen Marchal
authored at least 54 papers
between 2001 and 2022.
Collaborative distances:
Collaborative distances:
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Bibliography
2022
Bioinform., 2022
2020
2019
IAMBEE: a web-service for the identification of adaptive pathways from parallel evolved clonal populations.
Nucleic Acids Res., 2019
2018
Modeling multi-valued biological interaction networks using fuzzy answer set programming.
Fuzzy Sets Syst., 2018
2016
EXPLoRA-web: linkage analysis of quantitative trait loci using bulk segregant analysis.
Nucleic Acids Res., 2016
Simultaneous discovery of cancer subtypes and subtype features by molecular data integration.
Bioinform., 2016
2015
Nucleic Acids Res., 2015
SomInaClust: detection of cancer genes based on somatic mutation patterns of inactivation and clustering.
BMC Bioinform., 2015
2014
Nucleic Acids Res., 2014
Bioinform., 2014
Bioinform., 2014
Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2014
2013
ACM J. Emerg. Technol. Comput. Syst., 2013
Int. J. Bioinform. Res. Appl., 2013
EPSILON: an eQTL prioritization framework using similarity measures derived from local networks.
Bioinform., 2013
An alignment-free approach for eukaryotic ITS2 annotation and phylogenetic inference.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013
Using novel bio-inspired principles to improve adaptability of evolutionary robots in dynamically changing environments.
Proceedings of the Twelfth European Conference on the Synthesis and Simulation of Living Systems: Advances in Artificial Life, 2013
2012
Bioinform., 2012
Proceedings of the 12th IEEE International Conference on Data Mining Workshops, 2012
2011
Use of structural DNA properties for the prediction of transcription-factor binding sites in <i>Escherichia coli</i>.
Nucleic Acids Res., 2011
A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2.
BMC Syst. Biol., 2011
Query-based biclustering of gene expression data using Probabilistic Relational Models.
BMC Bioinform., 2011
An ensemble biclustering approach for querying gene expression compendia with experimental lists.
Bioinform., 2011
2010
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010
2009
Comparative analysis of module-based versus direct methods for reverse-engineering transcriptional regulatory networks.
BMC Syst. Biol., 2009
ModuleDigger: an itemset mining framework for the detection of <i>cis</i>-regulatory modules.
BMC Bioinform., 2009
Module networks revisited: computational assessment and prioritization of model predictions.
Bioinform., 2009
Proceedings of the International Joint Conferences on Bioinformatics, 2009
The Use of Mixed Models to Identify Differentially Expressed Genes when a Single Replicate per Biological Condition is Present.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2009
2008
BMC Bioinform., 2008
Exploring the Operational Characteristics of Inference Algorithms for Transcriptional Networks by Means of Synthetic Data.
Artif. Life, 2008
2007
BMC Bioinform., 2007
BMC Bioinform., 2007
CALIB: a Bioconductor package for estimating absolute expression levels from two-color microarray data.
Bioinform., 2007
2006
More robust detection of motifs in coexpressed genes by using phylogenetic information.
BMC Bioinform., 2006
SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms.
BMC Bioinform., 2006
Bioinform., 2006
2005
Proceedings of the Biocomputing 2005, 2005
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005
Proceedings of the Data Analysis and Visualization in Genomics and Proteomics, 2005
2003
INCLUSive: a web portal and service registry for microarray and regulatory sequence analysis.
Nucleic Acids Res., 2003
Eur. J. Control, 2003
2002
Proc. IEEE, 2002
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences.
Nucleic Acids Res., 2002
A Gibbs Sampling Method to Detect Overrepresented Motifs in the Upstream Regions of Coexpressed Genes.
J. Comput. Biol., 2002
Bioinform., 2002
2001
A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling.
Bioinform., 2001
A Gibbs sampling method to detect over-represented motifs in the upstream regions of co-expressed genes.
Proceedings of the Fifth Annual International Conference on Computational Biology, 2001