Takuji Yamada

According to our database1, Takuji Yamada authored at least 14 papers between 2004 and 2019.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

On csauthors.net:

Bibliography

2019
FuncTree2: an interactive radial tree for functional hierarchies and omics data visualization.
Bioinformatics, 2019

2018
iPath3.0: interactive pathways explorer v3.
Nucleic Acids Research, 2018

VITCOMIC2: visualization tool for the phylogenetic composition of microbial communities based on 16S rRNA gene amplicons and metagenomic shotgun sequencing.
BMC Systems Biology, 2018

2016
Identification of Enzyme Genes Using Chemical Structure Alignments of Substrate-Product Pairs.
Journal of Chemical Information and Modeling, 2016

2015
DomSign: a top-down annotation pipeline to enlarge enzyme space in the protein universe.
BMC Bioinformatics, 2015

2014
Addendum: Enterotypes of the human gut microbiome.
Nature, 2014

CLAST: CUDA implemented large-scale alignment search tool.
BMC Bioinformatics, 2014

2011
iPath2.0: interactive pathway explorer.
Nucleic Acids Research, 2011

2008
KEGG Atlas mapping for global analysis of metabolic pathways.
Nucleic Acids Research, 2008

2007
VisANT 3.0: new modules for pathway visualization, editing, prediction and construction.
Nucleic Acids Research, 2007

Systematic Analysis of Enzyme-Catalyzed Reaction Patterns and Prediction of Microbial Biodegradation Pathways.
Journal of Chemical Information and Modeling, 2007

2006
Extraction of phylogenetic network modules from the metabolic network.
BMC Bioinformatics, 2006

2005
VisANT: data-integrating visual framework for biological networks and modules.
Nucleic Acids Research, 2005

2004
Clustering under the line graph transformation: application to reaction network.
BMC Bioinformatics, 2004


  Loading...