Xu Shi

Orcid: 0000-0001-9130-9289

Affiliations:
  • Yale University, Department of Molecular Biophysics and BioChemistry, New Haven, CT, US
  • Virginia Polytechnic Institute and State University, Bradley Department of Electrical and Computer Engineering, Arlington, VA, USA


According to our database1, Xu Shi authored at least 10 papers between 2013 and 2025.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

Book  In proceedings  Article  PhD thesis  Dataset  Other 

Links

Online presence:

On csauthors.net:

Bibliography

2025
Bayesian identification of differentially expressed isoforms using a novel joint model of RNA-seq data.
PLoS Comput. Biol., 2025

2021
ChIP-BIT2: a software tool to detect weak binding events using a Bayesian integration approach.
BMC Bioinform., 2021

IntAPT: integrated assembly of phenotype-specific transcripts from multiple RNA-seq profiles.
Bioinform., 2021

2018
SparseIso: a novel Bayesian approach to identify alternatively spliced isoforms from RNA-seq data.
Bioinform., 2018

2017
PSSV: a novel pattern-based probabilistic approach for somatic structural variation identification.
Bioinform., 2017

2015
BMRF-Net: a software tool for identification of protein interaction subnetworks by a bagging Markov random field-based method.
Bioinform., 2015

2014
BSSV: Bayesian based somatic structural variation identification with whole genome DNA-seq data.
Proceedings of the 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2014

Statistical Identification of Co-regulatory Gene Modules using Multiple ChIP-Seq Experiments.
Proceedings of the BIOINFORMATICS 2014, 2014

2013
mAPC-GibbsOS: an integrated approach for robust identification of gene regulatory networks.
BMC Syst. Biol., 2013

A novel statistical approach to identify co-regulatory gene modules.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013


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