Yi-Jia Zhang

According to our database, Yi-Jia Zhang authored at least 88 papers between 2011 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

IMAEN: An interpretable molecular augmentation model for drug-target interaction prediction.

Jing Zhang, Zhi Liu, Yaohua Pan, Hongfei Lin, Yi-Jia Zhang

Expert Syst. Appl., March, 2024

Aspect category sentiment analysis based on prompt-based learning with attention mechanism.

Zhichao Ping, Guoming Sang, Zhi Liu, Yijia Zhang

Neurocomputing, January, 2024

MPTN: A message-passing transformer network for drug repurposing from knowledge graph.

Yuanxin Liu, Guoming Sang, Zhi Liu, Yilin Pan, Junkai Cheng, Yijia Zhang

Comput. Biol. Medicine, January, 2024

2023

A Domain Knowledge Transformer Model for Occupation Profiling.

Ai Zhou, Yi-Jia Zhang, Mingyu Lu

Int. J. Comput. Intell. Syst., December, 2023

CSDTI: an interpretable cross-attention network with GNN-based drug molecule aggregation for drug-target interaction prediction.

Yaohua Pan, Yijia Zhang, Jing Zhang, Mingyu Lu

Appl. Intell., November, 2023

MKCL: Medical Knowledge with Contrastive Learning model for radiology report generation.

Xiaodi Hou, Zhi Liu, Xiaobo Li, Xingwang Li, Shengtian Sang, Yijia Zhang

J. Biomed. Informatics, October, 2023

Protein Complex Identification Based on Heterogeneous Protein Information Network.

Peixuan Zhou, Yi-Jia Zhang, Zeqian Li, Kuo Pang, Di Zhao

J. Comput. Biol., September, 2023

Extracting Mutant-Affected Protein-Protein Interactions via Gaussian-Enhanced Representation and Contrastive Learning.

Da Liu, Yi-Jia Zhang, Ming Yang, Jianyuan Yuan, Wen Qu

J. Comput. Biol., September, 2023

Automatic International Classification of Diseases Coding via Note-Code Interaction Network with Denoising Mechanism.

Xiaobo Li, Yi-Jia Zhang, Xingwang Li, Xianwei Pan, Jian Wang, Mingyu Lu

J. Comput. Biol., August, 2023

ADPG: Biomedical entity recognition based on Automatic Dependency Parsing Graph.

Yumeng Yang, Hongfei Lin, Zhihao Yang, Yijia Zhang, Di Zhao, Shuaiheng Huai

J. Biomed. Informatics, April, 2023

DGCL: Distance-wise and Graph Contrastive Learning for medication recommendation.

Xingwang Li, Yi-Jia Zhang, Xiaobo Li, Hao Wei, Mingyu Lu

J. Biomed. Informatics, March, 2023

Knowledge Guided Attention and Graph Convolutional Networks for Chemical-Disease Relation Extraction.

Yi Sun, Jian Wang, Hongfei Lin, Yijia Zhang, Zhihao Yang

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

Knowledge Adaptive Multi-Way Matching Network for Biomedical Named Entity Recognition via Machine Reading Comprehension.

Peng Chen, Jian Wang, Hongfei Lin, Yijia Zhang, Zhihao Yang

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

A Transformer-Based Model With Self-Distillation for Multimodal Emotion Recognition in Conversations.

Hui Ma, Jian Wang, Hongfei Lin, Bo Zhang, Yijia Zhang, Bo Xu

CoRR, 2023

Self-Attention and MLP Auxiliary Convolution for Face Anti-Spoofing.

Hanqing Gu, Jiayin Chen, Fu-Su Xiao, Yi-Jia Zhang, Zhe-Ming Lu

IEEE Access, 2023

Radiology Report Generation via Visual Recalibration and Context Gating-Aware.

Xiaodi Hou, Guoming Sang, Zhi Liu, Xiaobo Li, Yijia Zhang

Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023

Self Question-Answering: Aspect Sentiment Triplet Extraction via a Multi-MRC Framework Based on Rethink Mechanism.

Fuyao Zhang, Yi-Jia Zhang, Mengyi Wang, Hong Yang, Mingyu Lu, Liang Yang

Proceedings of the Chinese Computational Linguistics - 22nd China National Conference, 2023

Adversarial Network with External Knowledge for Zero-Shot Stance Detection.

Chunling Wang, Yi-Jia Zhang, Xingyu Yu, Guantong Liu, Fei Chen, Hongfei Lin

Proceedings of the Chinese Computational Linguistics - 22nd China National Conference, 2023

Multi-Visit Interactive Recalibration Network for Drug Recommendation with a Triple Graph Encoder.

Xiaobo Li, Yi-Jia Zhang, Xiaodi Hou, Fanjun Meng, Hongfei Lin

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022

Helmet Wearing State Detection Based on Improved Yolov5s.

Yi-Jia Zhang, Fu-Su Xiao, Zhe-Ming Lu

Sensors, 2022

Biomedical event trigger extraction based on multi-layer residual BiLSTM and contextualized word representations.

Hao Wei, Ai Zhou, Yijia Zhang, Fei Chen, Wen Qu, Mingyu Lu

Int. J. Mach. Learn. Cybern., 2022

A multi-view network for real-time emotion recognition in conversations.

Hui Ma, Jian Wang, Hongfei Lin, Xuejun Pan, Yijia Zhang, Zhihao Yang

Knowl. Based Syst., 2022

Heterogeneous graph neural networks with denoising for graph embeddings.

Xinrui Dong, Yijia Zhang, Kuo Pang, Fei Chen, Mingyu Lu

Knowl. Based Syst., 2022

Dependency multi-weight-view graphs for event detection with label co-occurrence.

Yan Wang, Jian Wang, Hongfei Lin, Yijia Zhang, Zhihao Yang

Inf. Sci., 2022

A supervised protein complex prediction method with network representation learning and gene ontology knowledge.

Xiaoxu Wang, Yijia Zhang, Peixuan Zhou, Xiaoxia Liu

BMC Bioinform., 2022

MGEDR: A Molecular Graph Encoder for Drug Recommendation.

Kaiyuan Shi, Shaowu Zhang, Haifeng Liu, Yijia Zhang, Hongfei Lin

Proceedings of the Natural Language Processing and Chinese Computing, 2022

Heterogeneous PPI Network Representation Learning for Protein Complex Identification.

Peixuan Zhou, Yi-Jia Zhang, Fei Chen, Kuo Pang, Mingyu Lu

Proceedings of the Bioinformatics Research and Applications - 18th International Symposium, 2022

Gaussian-Enhanced Representation Model for Extracting Protein-Protein Interactions Affected by Mutations.

Da Liu, Yi-Jia Zhang, Ming Yang, Fei Chen, Mingyu Lu

Proceedings of the Bioinformatics Research and Applications - 18th International Symposium, 2022

NIDN: Medical Code Assignment via Note-Code Interaction Denoising Network.

Xiaobo Li, Yijia Zhang, Xingwang Li, Jian Wang, Mingyu Lu

Proceedings of the Bioinformatics Research and Applications - 18th International Symposium, 2022

Document-Level Relation Extraction with a Dependency Syntax Transformer and Supervised Contrastive Learning.

Ming Yang, Yijia Zhang, Santosh Kumar Banbhrani, Hongfei Lin, Mingyu Lu

Proceedings of the Knowledge Graph and Semantic Computing: Knowledge Graph Empowers the Digital Economy, 2022

Contrastive Self-Supervised Representation Learning for Protein Complexes Identification.

Peixuan Zhou, Yijia Zhang, Fei Chen, Mingyu Lu, Wen Qu, Hongfei Lin, Xiaoxia Liu

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

Knowledge-Enhanced Dual Graph Neural Network for Robust Medicine Recommendation.

Xingwang Li, Yijia Zhang, Jian Wang, Mingyu Lu, Hongfei Lin

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

Syntactic Type-aware Graph Attention Network for Drug-drug Interactions and their Adverse Effects Extraction.

Peng Chen, Jian Wang, Hongfei Lin, Yichen Wang, Di Zhao, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

Hierarchical matching network for multi-turn response selection in retrieval-based chatbots.

Hui Ma, Jian Wang, Hongfei Lin, Yi-Jia Zhang

Soft Comput., 2021

Medical code prediction via capsule networks and ICD knowledge.

Weidong Bao, Hongfei Lin, Yi-Jia Zhang, Jian Wang, Shaowu Zhang

BMC Medical Informatics Decis. Mak., 2021

Sentence representation with manifold learning for biomedical texts.

Di Zhao, Jian Wang, Hongfei Lin, Yonghe Chu, Yan Wang, Yi-Jia Zhang, Zhihao Yang

Knowl. Based Syst., 2021

Improving biomedical word representation with locally linear embedding.

Di Zhao, Jian Wang, Yonghe Chu, Yijia Zhang, Zhihao Yang, Hongfei Lin

Neurocomputing, 2021

Correlation of Centralities: A Study through Distinct Graph Robustness.

Xin-Ling Guo, Zhe-Ming Lu, Yi-Jia Zhang

IEICE Trans. Inf. Syst., 2021

JLAN: medical code prediction via joint learning attention networks and denoising mechanism.

Xingwang Li, Yijia Zhang, Faiz ul Islam, Deshi Dong, Hao Wei, Mingyu Lu

BMC Bioinform., 2021

Biomedical cross-sentence relation extraction via multihead attention and graph convolutional networks.

Di Zhao, Jian Wang, Hongfei Lin, Xin Wang, Zhihao Yang, Yijia Zhang

Appl. Soft Comput., 2021

LDA-Transformer Model in Chinese Poetry Authorship Attribution.

Ai Zhou, Yijia Zhang, Hao Wei, Mingyu Lu

Proceedings of the Information Retrieval - 27th China Conference, 2021

Aspect Fusion Graph Convolutional Networks for Aspect-Based Sentiment Analysis.

Fuyao Zhang, Yijia Zhang, Shuo Hou, Fei Chen, Mingyu Lu

Proceedings of the Information Retrieval - 27th China Conference, 2021

A Drug Repositioning Method Based on Heterogeneous Graph Neural Network.

Yu Wang, Shaowu Zhang, Yijia Zhang, Liang Yang, Hongfei Lin

Proceedings of the Information Retrieval - 27th China Conference, 2021

Auto-learning Convolution-Based Graph Convolutional Network for Medical Relation Extraction.

Mengyuan Qian, Jian Wang, Hongfei Lin, Di Zhao, Yijia Zhang, Wentai Tang, Zhihao Yang

Proceedings of the Information Retrieval - 27th China Conference, 2021

Co-Attentive Span Network with Multi-task learning for Biomedical Named Entity Recognition.

Peng Chen, Jian Wang, Hongfei Lin, Yijia Zhang, Zhihao Yang, Di Zhao, Hui Ma

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2020

A Multichannel Biomedical Named Entity Recognition Model Based on Multitask Learning and Contextualized Word Representations.

Hao Wei, Mingyuan Gao, Ai Zhou, Fei Chen, Wen Qu, Yijia Zhang, Mingyu Lu

Wirel. Commun. Mob. Comput., 2020

Incorporating representation learning and multihead attention to improve biomedical cross-sentence n-ary relation extraction.

Di Zhao, Jian Wang, Yi-Jia Zhang, Xin Wang, Hongfei Lin, Zhihao Yang

BMC Bioinform., 2020

Biomedical document triage using a hierarchical attention-based capsule network.

Jian Wang, Mengying Li, Qishuai Diao, Hongfei Lin, Zhihao Yang, Yi-Jia Zhang

BMC Bioinform., 2020

Hyperbolic Attributed Network Embedding with self-adaptive Random Walks.

Bin Wu, Yijia Zhang, Yuxin Wang

Proceedings of the CIIS 2020: The 3rd International Conference on Computational Intelligence and Intelligent Systems, 2020

A hierarchical knowledge-aware neural network for protein-protein interaction article classification.

Hao Wei, Ai Zhou, Yijia Zhang, Fei Chen, Wen Qu, Mingyu Lu

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

Extracting Protein-Protein Interactions Affected by Mutations via Auxiliary Task and Domain Pre-trained Model.

Yu Wang, Shaowu Zhang, Yijia Zhang, Jian Wang, Hongfei Lin

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019

Extracting drug-drug interactions with hybrid bidirectional gated recurrent unit and graph convolutional network.

Di Zhao, Jian Wang, Hongfei Lin, Zhihao Yang, Yijia Zhang

J. Biomed. Informatics, 2019

Neural network-based approaches for biomedical relation classification: A review.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yuanyuan Sun, Bo Xu, Zhehuan Zhao

J. Biomed. Informatics, 2019

Chemical-protein interaction extraction from biomedical literature: a hierarchical recurrent convolutional neural network method.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Int. J. Data Min. Bioinform., 2019

Exploring Semi-supervised Variational Autoencoders for Biomedical Relation Extraction.

Yijia Zhang, Zhiyong Lu

CoRR, 2019

Adverse drug reaction detection via a multihop self-attention mechanism.

Tongxuan Zhang, Hongfei Lin, Yuqi Ren, Liang Yang, Bo Xu, Zhihao Yang, Jian Wang, Yijia Zhang

BMC Bioinform., 2019

A supervised term ranking model for diversity enhanced biomedical information retrieval.

Bo Xu, Hongfei Lin, Liang Yang, Kan Xu, Yi-Jia Zhang, Dongyu Zhang, Zhihao Yang, Jian Wang, Yuan Lin, Fuliang Yin

BMC Bioinform., 2019

Chemical-protein interaction extraction via contextualized word representations and multihead attention.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yuanyuan Sun

Database J. Biol. Databases Curation, 2019

2018

An effective neural model extracting document level chemical-induced disease relations from biomedical literature.

Wei Zheng, Hongfei Lin, Zhiheng Li, Xiaoxia Liu, Zhengguang Li, Bo Xu, Yijia Zhang, Zhihao Yang, Jian Wang

J. Biomed. Informatics, 2018

A hybrid model based on neural networks for biomedical relation extraction.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Shaowu Zhang, Yuanyuan Sun, Liang Yang

J. Biomed. Informatics, 2018

Protein complexes identification based on go attributed network embedding.

Bo Xu, Kun Li, Wei Zheng, Xiaoxia Liu, Yijia Zhang, Zhehuan Zhao, Zengyou He

BMC Bioinform., 2018

Drug-drug interaction extraction via hierarchical RNNs on sequence and shortest dependency paths.

Yijia Zhang, Wei Zheng, Hongfei Lin, Jian Wang, Zhihao Yang, Michel Dumontier

Bioinform., 2018

Protein Complexes Detection Based on Global Network Representation Learning.

Bo Xu, Kun Li, Xiaoxia Liu, Delong Liu, Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Feng Xia

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A Weak Supervised Learning Method for Essential Protein Detection Based on STRING Database and Learning Representation.

Zhizheng Wang, Yuanyuan Sun, Yawen Guan, Yibin Zhang, Liang Yang, Kan Xu, Yijia Zhang, Hongfei Lin

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Hierarchical Recurrent Convolutional Neural Network for Chemical-protein Relation Extraction from Biomedical Literature.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A Knowledge Graph based Bidirectional Recurrent Neural Network Method for Literature-based Discovery.

Shengtian Sang, Zhihao Yang, Xiaoxia Liu, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Protein-Protein Interaction Article Classification: A Knowledge-enriched Self-Attention Convolutional Neural Network Approach.

Ling Luo, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

PC-SENE: A node embedding based method for protein complex detection.

Xiaoxia Liu, Zhihao Yang, Shengtian Sang, Lei Wang, Yin Zhang, Hongfei Lin, Bo Xu, Yijia Zhang, Liang Yang, Kan Xu, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

HMNPPID: A Database of Protein-protein Interactions Associated with Human Malignant Neoplasms.

Qingqing Li, Zhihao Yang, Zhehuan Zhao, Ling Luo, Zhiheng Li, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A multi-task learning based approach to biomedical entity relation extraction.

Qingqing Li, Zhihao Yang, Ling Luo, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Improve Diversity-oriented Biomedical Information Retrieval using Supervised Query Expansion.

Bo Xu, Hongfei Lin, Liang Yang, Kan Xu, Yijia Zhang, Dongyu Zhang, Zhihao Yang, Jian Wang, Yuan Lin, Fuliang Yin

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017

The Structural Vulnerability Analysis of Power Grids Based on Second-Order Centrality.

Zhong-Jian Kang, Yi-Jia Zhang, Xin-Ling Guo, Zhe-Ming Lu

IEICE Trans. Fundam. Electron. Commun. Comput. Sci., 2017

An attention-based effective neural model for drug-drug interactions extraction.

Wei Zheng, Hongfei Lin, Ling Luo, Zhehuan Zhao, Zhengguang Li, Yijia Zhang, Zhihao Yang, Jian Wang

BMC Bioinform., 2017

2016

A graph kernel based on context vectors for extracting drug-drug interactions.

Wei Zheng, Hongfei Lin, Zhehuan Zhao, Bo Xu, Yijia Zhang, Zhihao Yang, Jian Wang

J. Biomed. Informatics, 2016

The Controllability of Power Grids in Comparison with Classical Complex Network Models.

Yi-Jia Zhang, Zhong-Jian Kang, Xin-Feng Li, Zhe-Ming Lu

IEICE Trans. Inf. Syst., 2016

The Structural Vulnerability Analysis of Power Grids Based on Overall Information Centrality.

Yi-Jia Zhang, Zhong-Jian Kang, Xin-Ling Guo, Zhe-Ming Lu

IEICE Trans. Inf. Syst., 2016

A method for predicting protein complex in dynamic PPI networks.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yiwei Liu, Shengtian Sang

BMC Bioinform., 2016

Construction of dynamic probabilistic protein interaction networks for protein complex identification.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang

BMC Bioinform., 2016

2015

Integrating experimental and literature protein-protein interaction data for protein complex prediction.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang

BMC Genom., 2015

A Method of the Detection of Frequency-Hopping Signal Based on Channelized Receiver in the Complicated Electromagnetic Environment.

Yi-Jia Zhang, Rui-Ying Liu, Hua-jun Song

Proceedings of the 2015 International Conference on Intelligent Information Hiding and Multimedia Signal Processing, 2015

Application of Dichotomy to Network Partition Based on Sub Network Exchange Gain.

Yi-Jia Zhang, Zhong-Jian Kang, Zhen Wu, Zhe-Ming Lu

Proceedings of the 2015 International Conference on Intelligent Information Hiding and Multimedia Signal Processing, 2015

A Security Protocol Applied to Covert Communication Platform and Its Formal Analysis.

Yi-Jia Zhang, Rui-Ying Liu, Zhong-Jian Kang, Han Qi

Proceedings of the 39th Annual Computer Software and Applications Conference, 2015

Biomedical event trigger detection by dependency-based word embedding.

Jian Wang, Jianhai Zhang, Yuan An, Hongfei Lin, Zhihao Yang, Yijia Zhang, Yuanyuan Sun

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2013

Protein Complex Prediction in Large Ontology Attributed Protein-Protein Interaction Networks.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yanpeng Li, Bo Xu

IEEE ACM Trans. Comput. Biol. Bioinform., 2013

Integrating multiple biomedical resources for protein complex prediction.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Bo Xu

Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012

Hash Subgraph Pairwise Kernel for Protein-Protein Interaction Extraction.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yanpeng Li

IEEE ACM Trans. Comput. Biol. Bioinform., 2012

2011

Neighborhood hash graph kernel for protein-protein interaction extraction.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Yanpeng Li

J. Biomed. Informatics, 2011

Identifying Protein Complexes from PPI Networks Using GO Semantic Similarity.

Jian Wang, Dong Xie, Hongfei Lin, Zhihao Yang, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011