Hongfei Lin

According to our database1, Hongfei Lin authored at least 172 papers between 1999 and 2018.

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Bibliography

2018
Exploring Answer Information for Question Classification in Community Question Answering.
Multiple-Valued Logic and Soft Computing, 2018

An effective neural model extracting document level chemical-induced disease relations from biomedical literature.
Journal of Biomedical Informatics, 2018

A hybrid model based on neural networks for biomedical relation extraction.
Journal of Biomedical Informatics, 2018

Wavelet-denoising multiple echo state networks for multivariate time series prediction.
Inf. Sci., 2018

A document level neural model integrated domain knowledge for chemical-induced disease relations.
BMC Bioinformatics, 2018

SemaTyP: a knowledge graph based literature mining method for drug discovery.
BMC Bioinformatics, 2018

Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks.
BMC Bioinformatics, 2018

Drug-drug interaction extraction via hierarchical RNNs on sequence and shortest dependency paths.
Bioinformatics, 2018

An attention-based BiLSTM-CRF approach to document-level chemical named entity recognition.
Bioinformatics, 2018

Document triage for identifying protein-protein interactions affected by mutations: a neural network ensemble approach.
Database, 2018

Improving Pseudo-Relevance Feedback With Neural Network-Based Word Representations.
IEEE Access, 2018

Personality Predictions Based on User Behavior on the Facebook Social Media Platform.
IEEE Access, 2018

Ensemble of Neural Networks with Sentiment Words Translation for Code-Switching Emotion Detection.
Proceedings of the Natural Language Processing and Chinese Computing, 2018

Stock Market Trend Prediction Using Recurrent Convolutional Neural Networks.
Proceedings of the Natural Language Processing and Chinese Computing, 2018

A Normalized Encoder-Decoder Model for Abstractive Summarization Using Focal Loss.
Proceedings of the Natural Language Processing and Chinese Computing, 2018

NLPCC 2018 Shared Task User Profiling and Recommendation Method Summary by DUTIR_9148.
Proceedings of the Natural Language Processing and Chinese Computing, 2018

WECA:A WordNet-Encoded Collocation-Attention Network for Homographic Pun Recognition.
Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, Brussels, Belgium, October 31, 2018

DUTIR at the CCKS-2018 Task1: A Neural Network Ensemble Approach for Chinese Clinical Named Entity Recognition.
Proceedings of the Evaluation Tasks at the China Conference on Knowledge Graph and Semantic Computing (CCKS 2018), 2018

Extraction New Sentiment Words in Weibo Based on Relative Branch Entropy.
Proceedings of the Information Retrieval - 24th China Conference, 2018

Construction of a Chinese Corpus for the Analysis of the Emotionality of Metaphorical Expressions.
Proceedings of the 56th Annual Meeting of the Association for Computational Linguistics, 2018

2017
A multiple distributed representation method based on neural network for biomedical event extraction.
BMC Med. Inf. & Decision Making, 2017

Assembling Deep Neural Networks for Medical Compound Figure Detection.
Information, 2017

Deep Transfer Learning for Modality Classification of Medical Images.
Information, 2017

A Convolution-LSTM-Based Deep Neural Network for Cross-Domain MOOC Forum Post Classification.
Information, 2017

Convolutional neural networks for expert recommendation in community question answering.
SCIENCE CHINA Information Sciences, 2017

DIGNiFI: Discovering causative genes for orphan diseases using protein-protein interaction networks.
BMC Systems Biology, 2017

An attention-based effective neural model for drug-drug interactions extraction.
BMC Bioinformatics, 2017

Low-Resource Cross-Domain Product Review Sentiment Classification Based on a CNN with an Auxiliary Large-Scale Corpus.
Algorithms, 2017

Social Annotation for Query Expansion Learning from Multiple Expansion Strategies.
Proceedings of the Social Media Processing - 6th National Conference, 2017

NLPCC 2017 Shared Task Social Media User Modeling Method Summary by DUTIR_923.
Proceedings of the Natural Language Processing and Chinese Computing, 2017

First Place Solution for NLPCC 2017 Shared Task Social Media User Modeling.
Proceedings of the Natural Language Processing and Chinese Computing, 2017

Homographic Puns Recognition Based on Latent Semantic Structures.
Proceedings of the Natural Language Processing and Chinese Computing, 2017

Detecting Potential Adverse Drug Reactions Using Association Rules and Embedding Models.
Proceedings of the Bioinformatics Research and Applications - 13th International Symposium, 2017

Learning to Rank with Query-level Semi-supervised Autoencoders.
Proceedings of the 2017 ACM on Conference on Information and Knowledge Management, 2017

Tripartite-Replicated Softmax Model for Document Representations.
Proceedings of the Information Retrieval - 23rd China conference, 2017

Musical Query-by-Semantic-Description Based on Convolutional Neural Network.
Proceedings of the Information Retrieval - 23rd China conference, 2017

A hybrid protein-protein interaction triple extraction method for biomedical literature.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Biomedical event trigger detection based on bidirectional LSTM and CRF.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2016
A graph kernel based on context vectors for extracting drug-drug interactions.
Journal of Biomedical Informatics, 2016

Assessment of learning to rank methods for query expansion.
JASIST, 2016

Combining local and global information for product feature extraction in opinion documents.
Inf. Process. Lett., 2016

Granular transfer learning using type-2 fuzzy HMM for text sequence recognition.
Neurocomputing, 2016

A protein-protein interaction extraction approach based on deep neural network.
IJDMB, 2016

Biomedical event trigger detection based on convolutional neural network.
IJDMB, 2016

Detection and Extraction of Hot Topics on Chinese Microblogs.
Cognitive Computation, 2016

A method for predicting protein complex in dynamic PPI networks.
BMC Bioinformatics, 2016

Construction of dynamic probabilistic protein interaction networks for protein complex identification.
BMC Bioinformatics, 2016

Improving biomedical information retrieval by linear combinations of different query expansion techniques.
BMC Bioinformatics, 2016

Drug drug interaction extraction from biomedical literature using syntax convolutional neural network.
Bioinformatics, 2016

Visual and Textual Sentiment Analysis of a Microblog Using Deep Convolutional Neural Networks.
Algorithms, 2016

Generating User-oriented Text Summarization Based on Social Networks Using Topic Models.
Proceedings of the Social Media Processing - 5th National Conference, 2016

Predicting Best Answerers for New Questions: An Approach Leveraging Convolution Neural Networks in Community Question Answering.
Proceedings of the Social Media Processing - 5th National Conference, 2016

Detecting Potential Adverse Drug Reactions from Health-Related Social Networks.
Proceedings of the Natural Language Understanding and Intelligent Applications, 2016

DUTIR in BioNLP-ST 2016: Utilizing Convolutional Network and Distributed Representation to Extract Complicate Relations.
Proceedings of the 4th BioNLP Shared Task Workshop, BioNLP 2016, 2016

Disease-specific protein complex detection in the human protein interaction network with a supervised learning method.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

ML-CNN: A novel deep learning based disease named entity recognition architecture.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

Biomedical event extraction based on distributed representation and deep learning.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

CIDExtractor: A chemical-induced disease relation extraction system for biomedical literature.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

DIGNiFI: Discovering causative genes for orphan diseases using protein-protein interaction networks.
Proceedings of the 7th ACM International Conference on Bioinformatics, 2016

Patent Retrieval Based on Multiple Information Resources.
Proceedings of the Information Retrieval Technology, 2016

Learning to Rank with Likelihood Loss Functions.
Proceedings of the Information Retrieval Technology, 2016

2015
How we collaborate: characterizing, modeling and predicting scientific collaborations.
Scientometrics, 2015

Group-enhanced ranking.
Neurocomputing, 2015

A social network model driven by events and interests.
Expert Syst. Appl., 2015

Integrating experimental and literature protein-protein interaction data for protein complex prediction.
BMC Genomics, 2015

Predicting User Relationship from Scratch.
Proceedings of the Social Media Processing - 4th National Conference, 2015

A Cross-Domain Sentiment Classification Method Based on Extraction of Key Sentiment Sentence.
Proceedings of the Natural Language Processing and Chinese Computing - 4th CCF Conference, 2015

Predicting Best Answerers for New Questions: An Approach Leveraging Distributed Representations of Words in Community Question Answering.
Proceedings of the Ninth International Conference on Frontier of Computer Science and Technology, 2015

Incorporating Sample Filtering into Subject-Based Ensemble Model for Cross-Domain Sentiment Classification.
Proceedings of the Chinese Computational Linguistics and Natural Language Processing Based on Naturally Annotated Big Data, 2015

Deep neural network based protein-protein interaction extraction from biomedical literature.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

Discover potential adverse drug reactions using the skip-gram model.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

Learning to rank for biomedical information retrieval.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

Biomedical event trigger detection by dependency-based word embedding.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014
Learning to rank-based gene summary extraction.
BMC Bioinformatics, 2014

Enhancing the accuracy of knowledge discovery: a supervised learning method.
BMC Bioinformatics, 2014

Audio Retrieval Based on Manifold Ranking.
Proceedings of the Sixth International Symposium on Parallel Architectures, 2014

GPQ: Directly Optimizing Q-measure based on Genetic Programming.
Proceedings of the 23rd ACM International Conference on Conference on Information and Knowledge Management, 2014

Data integration and supervised learning based protein complex detection method.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

Deep graph search based disease related knowledge summarization from biomedical literature.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

Exploring the relation between the characteristics of protein interaction networks and the performances of computational complex detection methods.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

2013
Protein Complex Prediction in Large Ontology Attributed Protein-Protein Interaction Networks.
IEEE/ACM Trans. Comput. Biology Bioinform., 2013

Combating Web spam through trust-distrust propagation with confidence.
Pattern Recognition Letters, 2013

Exploring Useful Features for Biomedical Event Trigger Detection.
Multiple-Valued Logic and Soft Computing, 2013

Topical community detection from mining user tagging behavior and interest.
JASIST, 2013

Learning to rank using smoothing methods for language modeling.
JASIST, 2013

A Time-Sensitive Model for Microblog Retrieval.
Proceedings of the Natural Language Processing and Chinese Computing, 2013

Integrating multiple biomedical resources for protein complex prediction.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

Predicting protein complexes in protein interaction networks: A supervised learning based method.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

Learning to rank based gene summary extraction.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

Enhancing the accuracy of knowledge discovery: A supervised learning method.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012
Hash Subgraph Pairwise Kernel for Protein-Protein Interaction Extraction.
IEEE/ACM Trans. Comput. Biology Bioinform., 2012

An Improved HITS Algorithm Based on Page-query Similarity and Page Popularity.
JCP, 2012

An Attractive Force Model for Weighting Links in Query-Dependant Web Page Ranking.
JCP, 2012

Mining a multilingual association dictionary from Wikipedia for cross-language information retrieval.
JASIST, 2012

Twitter part-of-speech tagging using pre-classification Hidden Markov model.
Proceedings of the IEEE International Conference on Systems, Man, and Cybernetics, 2012

EMIR: A Novel Music Retrieval System for Mobile Devices Incorporating Analysis of User Emotion.
Proceedings of the Advances in Multimedia Modeling - 18th International Conference, 2012

Transfer learning based on graph ranking.
Proceedings of the 9th International Conference on Fuzzy Systems and Knowledge Discovery, 2012

Construction and Application of Chinese Emotional Corpus.
Proceedings of the Chinese Lexical Semantics - 13th Workshop, 2012

PPIExtractor: A protein-protein interaction Extractor for biomédical literature.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

Classifying protein complexes from candidate subgraphs using fuzzy machine learning model.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

A syntactic rule-based method for automatic pathway information extraction from biomédical literature.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

Combining labeled and unlabeled data for biomédical event extraction.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

Where Are You Settling Down: Geo-locating Twitter Users Based on Tweets and Social Networks.
Proceedings of the Information Retrieval Technology, 2012

Sells Out or Piles Up? A Sentiment Autoregressive Model for Predicting Sales Performance.
Proceedings of the Information Retrieval Technology, 2012

Query Expansion Based on User Quality in Folksonomy.
Proceedings of the Information Retrieval Technology, 2012

Feature Transformation Method Enhanced Vandalism Detection in Wikipedia.
Proceedings of the Information Retrieval Technology, 2012

2011
A Framework for Semisupervised Feature Generation and Its Applications in Biomedical Literature Mining.
IEEE/ACM Trans. Comput. Biology Bioinform., 2011

Query by Humming Systems Using Melody Matching Model Based on the Genetic Algorithm.
JSW, 2011

Topic Detection with Hypergraph Partition Algorithm.
JSW, 2011

Segmenting Webpage with Gomory-Hu Tree Based Clustering.
JSW, 2011

Neighborhood hash graph kernel for protein-protein interaction extraction.
Journal of Biomedical Informatics, 2011

Finding a good query-related topic for boosting pseudo-relevance feedback.
JASIST, 2011

Incorporating rich features to boost information retrieval performance: A SVM-regression based re-ranking approach.
Expert Syst. Appl., 2011

Combining multiple disambiguation methods for gene mention normalization.
Expert Syst. Appl., 2011

Knowledge transfer based on feature representation mapping for text classification.
Expert Syst. Appl., 2011

Passage retrieval based hidden knowledge discovery from biomedical literature.
Expert Syst. Appl., 2011

An improved spectral clustering algorithm based on local neighbors in kernel space.
Comput. Sci. Inf. Syst., 2011

A two-stage feature selection method for text categorization.
Computers & Mathematics with Applications, 2011

Multiple kernel learning in protein-protein interaction extraction from biomedical literature.
Artificial Intelligence in Medicine, 2011

DUTIR at TREC 2011 Chemistry Track.
Proceedings of The Twentieth Text REtrieval Conference, 2011

DUTIR at TREC 2011 Microblog Track.
Proceedings of The Twentieth Text REtrieval Conference, 2011

DUTIR at the Session Track in TREC 2011.
Proceedings of The Twentieth Text REtrieval Conference, 2011

A hybrid PSO-Viterbi algorithm for HMMs parameters weighting in Part-of-Speech tagging.
Proceedings of the Third International Conference of Soft Computing and Pattern Recognition, 2011

Learning to rank using query-level regression.
Proceedings of the Proceeding of the 34th International ACM SIGIR Conference on Research and Development in Information Retrieval, 2011

Social annotation in query expansion: a machine learning approach.
Proceedings of the Proceeding of the 34th International ACM SIGIR Conference on Research and Development in Information Retrieval, 2011

A Bayesian network approach to context sensitive query expansion.
Proceedings of the 2011 ACM Symposium on Applied Computing (SAC), TaiChung, Taiwan, March 21, 2011

Active Semi-supervised Spectral Clustering.
Proceedings of the Fourth International Symposium on Parallel Architectures, 2011

Selecting related terms in query-logs using two-stage SimRank.
Proceedings of the 20th ACM Conference on Information and Knowledge Management, 2011

Learning to rank with cross entropy.
Proceedings of the 20th ACM Conference on Information and Knowledge Management, 2011

Identifying Protein Complexes from PPI Networks Using GO Semantic Similarity.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011

Learning to Rank by Optimizing Expected Reciprocal Rank.
Proceedings of the Information Retrieval Technology, 2011

2010
Corpus-based Extraction of Chinese Historical Term Translation Equivalents.
Int. J. of Asian Lang. Proc., 2010

BioPPISVMExtractor: A protein-protein interaction extractor for biomedical literature using SVM and rich feature sets.
Journal of Biomedical Informatics, 2010

Learning an enriched representation from unlabeled data for protein-protein interaction extraction.
BMC Bioinformatics, 2010

Hypergraph Partition with Harmonic Average Top-N and PCA for Topic Detection.
Proceedings of the Third International Symposium on Parallel Architectures, 2010

A two-stage feature selection method for text categorization.
Proceedings of the Seventh International Conference on Fuzzy Systems and Knowledge Discovery, 2010

Learning to rank with groups.
Proceedings of the 19th ACM Conference on Information and Knowledge Management, 2010

Ranking SVM for multiple kernels output combination in protein-protein interaction extraction from biomedical literature.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

Ontology integration to identify protein complex in protein interaction networks.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

Exploring Social Annotation Tags to Enhance Information Retrieval Performance.
Proceedings of the Active Media Technology, 6th International Conference, 2010

Revisiting Rocchio's Relevance Feedback Algorithm for Probabilistic Models.
Proceedings of the Information Retrieval Technology, 2010

A Revised SimRank Approach for Query Expansion.
Proceedings of the Information Retrieval Technology, 2010

Emotion Tag Based Music Retrieval Algorithm.
Proceedings of the Information Retrieval Technology, 2010

K-means and Graph-based Approaches for Chinese Word Sense Induction Task.
Proceedings of the CIPS-SIGHAN Joint Conference on Chinese Language Processing, 2010

2009
BioPPIExtractor: A protein-protein interaction extraction system for biomedical literature.
Expert Syst. Appl., 2009

Uncertainty sampling-based active learning for protein-protein interaction extraction from biomedical literature.
Expert Syst. Appl., 2009

Incorporating rich background knowledge for gene named entity classification and recognition.
BMC Bioinformatics, 2009

York University at TREC 2009: Relevance Feedback Track.
Proceedings of The Eighteenth Text REtrieval Conference, 2009

DUTIR at TREC 2009: Chemical IR Track.
Proceedings of The Eighteenth Text REtrieval Conference, 2009

A graph-based approach to mining multilingual word associations from wikipedia.
Proceedings of the 32nd Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, 2009

Study on question answering system for biomedical domain.
Proceedings of the 2009 IEEE International Conference on Granular Computing, 2009

Query expansion based on folksonomy tag co-occurrence analysis.
Proceedings of the 2009 IEEE International Conference on Granular Computing, 2009

Towards A Better Performance for Medical Image Retrieval Using An Integrated Approach.
Proceedings of the Working Notes for CLEF 2009 Workshop co-located with the 13th European Conference on Digital Libraries (ECDL 2009) , Corfù, Greece, September 30, 2009

An Integrated Approach for Medical Image Retrieval through Combining Textual and Visual Features.
Proceedings of the Multilingual Information Access Evaluation II. Multimedia Experiments, 2009

Applying Feature Coupling Generalization for Protein-Protein Interaction Extraction.
Proceedings of the 2009 IEEE International Conference on Bioinformatics and Biomedicine, 2009

A Boosting Approach for Learning to Rank Using SVD with Partially Labeled Data.
Proceedings of the Information Retrieval Technology, 2009

2008
Exploiting the contextual cues for bio-entity name recognition in biomedical literature.
Journal of Biomedical Informatics, 2008

Exploiting the performance of dictionary-based bio-entity name recognition in biomedical literature.
Computational Biology and Chemistry, 2008

DUTIR at TREC 2008 Relevance Feedback Track.
Proceedings of The Seventeenth Text REtrieval Conference, 2008

DUTIR at TREC 2008 Blog Track.
Proceedings of The Seventeenth Text REtrieval Conference, 2008

Research on Focal Figures-Oriented Sentimental Question Answering.
Proceedings of the ALPIT 2008, 2008

Automatic Opinion Analysis Based on SVM and Distance-Weighted Computing.
Proceedings of the ALPIT 2008, 2008

Enhancing Biomedical Named Entity Classification Using Terabyte Unlabeled Data.
Proceedings of the Information Retrieval Technology, 2008

2007
DUTIR at TREC 2007 Genomics Track.
Proceedings of The Sixteenth Text REtrieval Conference, 2007

DUTIR at TREC 2007 Blog Track.
Proceedings of The Sixteenth Text REtrieval Conference, 2007

DUTIR at TREC 2007 Enterprise Track.
Proceedings of The Sixteenth Text REtrieval Conference, 2007

Incorporating Dictionary Features into Conditional Random Fields for Gene/Protein Named Entity Recognition.
Proceedings of the Emerging Technologies in Knowledge Discovery and Data Mining, 2007

Two Phase Indexes Based Passage Retrieval in Biomedical Texts.
Proceedings of the Bio-Inspired Computational Intelligence and Applications, 2007

Ontology-Driven Affective Chinese Text Analysis and Evaluation Method.
Proceedings of the Affective Computing and Intelligent Interaction, 2007

2006
DUTIR at TREC 2006: Genomics and Enterprise Tracks.
Proceedings of the Fifteenth Text REtrieval Conference, 2006

2005
TREC 2005 Genomics Track Experiments at DUTAI.
Proceedings of the Fourteenth Text REtrieval Conference, 2005

1999
Example-Based Chinese Text Filtering Model.
Proceedings of the Internet Applications, 5th International Computer Science Conference, 1999


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