Hongfei Lin

According to our database, Hongfei Lin authored at least 258 papers between 1999 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2020

Integrating social annotations into topic models for personalized document retrieval.

Bo Xu, Hongfei Lin, Yuan Lin, Yizhou Guan

Soft Comput., 2020

Homographic pun location using multi-dimensional semantic relationships.

Yufeng Diao, Hongfei Lin, Liang Yang, Xiaochao Fan, Di Wu, Kan Xu

Soft Comput., 2020

CRHASum: extractive text summarization with contextualized-representation hierarchical-attention summarization network.

Yufeng Diao, Hongfei Lin, Liang Yang, Xiaochao Fan, Yonghe Chu, Di Wu, Dongyu Zhang, Kan Xu

Neural Comput. Appl., 2020

Multi-granularity bidirectional attention stream machine comprehension method for emotion cause extraction.

Yufeng Diao, Hongfei Lin, Liang Yang, Xiaochao Fan, Yonghe Chu, Di Wu, Kan Xu, Bo Xu

Neural Comput. Appl., 2020

Fuzzy ELM for classification based on feature space.

Yonghe Chu, Hongfei Lin, Liang Yang, Dongyu Zhang, Shaowu Zhang, Yufeng Diao, Deqin Yan

Multim. Tools Appl., 2020

KGHC: a knowledge graph for hepatocellular carcinoma.

Nan Li, Zhihao Yang, Ling Luo, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

BMC Medical Informatics Decis. Mak., 2020

CRGA: Homographic pun detection with a contextualized-representation: Gated attention network.

Yufeng Diao, Hongfei Lin, Liang Yang, Xiaochao Fan, Di Wu, Kan Xu

Knowl. Based Syst., 2020

Hyperspectral image classification based on discriminative locality preserving broad learning system.

Yonghe Chu, Hongfei Lin, Liang Yang, Dongyu Zhang, Yufeng Diao, Xiaochao Fan, Chen Shen

Knowl. Based Syst., 2020

Attention guided capsule networks for chemical-protein interaction extraction.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

J. Biomed. Informatics, 2020

A neural network-based joint learning approach for biomedical entity and relation extraction from biomedical literature.

Ling Luo, Zhihao Yang, Mingyu Cao, Lei Wang, Yin Zhang, Hongfei Lin

J. Biomed. Informatics, 2020

Exploiting adversarial transfer learning for adverse drug reaction detection from texts.

Zhiheng Li, Zhihao Yang, Ling Luo, Yang Xiang, Hongfei Lin

J. Biomed. Informatics, 2020

Sarcasm Detection with Sentiment Semantics Enhanced Multi-level Memory Network.

Lu Ren, Bo Xu, Hongfei Lin, Xikai Liu, Liang Yang

Neurocomputing, 2020

Humor detection via an internal and external neural network.

Xiaochao Fan, Hongfei Lin, Liang Yang, Yufeng Diao, Chen Shen, Yonghe Chu, Yanbo Zou

Neurocomputing, 2020

FBSN: A hybrid fine-grained neural network for biomedical event trigger identification.

Yufeng Diao, Hongfei Lin, Liang Yang, Xiaochao Fan, Di Wu, Zhihao Yang, Jian Wang, Kan Xu

Neurocomputing, 2020

Discriminative globality-locality preserving extreme learning machine for image classification.

Yonghe Chu, Hongfei Lin, Liang Yang, Yufeng Diao, Dongyu Zhang, Shaowu Zhang, Xiaochao Fan, Chen Shen, Bo Xu, Deqin Yan

Neurocomputing, 2020

Biomedical named entity recognition using BERT in the machine reading comprehension framework.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

CoRR, 2020

Phonetics and Ambiguity Comprehension Gated Attention Network for Humor Recognition.

Xiaochao Fan, Hongfei Lin, Liang Yang, Yufeng Diao, Chen Shen, Yonghe Chu, Tongxuan Zhang

Complex., 2020

Incorporating representation learning and multihead attention to improve biomedical cross-sentence n-ary relation extraction.

Di Zhao, Jian Wang, Yi-Jia Zhang, Xin Wang, Hongfei Lin, Zhihao Yang

BMC Bioinform., 2020

Biomedical document triage using a hierarchical attention-based capsule network.

Jian Wang, Mengying Li, Qishuai Diao, Hongfei Lin, Zhihao Yang, Yi-Jia Zhang

BMC Bioinform., 2020

Exploiting sequence labeling framework to extract document-level relations from biomedical texts.

Zhiheng Li, Zhihao Yang, Yang Xiang, Ling Luo, Yuanyuan Sun, Hongfei Lin

BMC Bioinform., 2020

Chemical-protein interaction extraction via Gaussian probability distribution and external biomedical knowledge.

Cong Sun, Zhihao Yang, Leilei Su, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

Bioinform., 2020

Detection of Suicide Ideation in Social Media Forums Using Deep Learning.

Michael Mesfin Tadesse, Hongfei Lin, Bo Xu, Liang Yang

Algorithms, 2020

Multi-Element Hierarchical Attention Capsule Network for Stock Prediction.

Jintao Liu, Hongfei Lin, Liang Yang, Bo Xu, Dongzhen Wen

IEEE Access, 2020

Sentiment Analysis With Comparison Enhanced Deep Neural Network.

Yuan Lin, Jiaping Li, Liang Yang, Kan Xu, Hongfei Lin

IEEE Access, 2020

Interactive Self-Attentive Siamese Network for Biomedical Sentence Similarity.

Zhengguang Li, Hongfei Lin, Wei Zheng, Michael M. Tadesse, Zhihao Yang, Jian Wang

IEEE Access, 2020

An Effective Emotional Expression and Knowledge-Enhanced Method for Detecting Adverse Drug Reactions.

Zhengguang Li, Hongfei Lin, Wei Zheng

IEEE Access, 2020

A Multi-Dimension Question Answering Network for Sarcasm Detection.

Yufeng Diao, Hongfei Lin, Liang Yang, Xiaochao Fan, Yonghe Chu, Kan Xu, Di Wu

IEEE Access, 2020

Weighted Pre-trained Language Models for Multi-Aspect-Based Multi-Sentiment Analysis.

Fengqing Zhou, Jinhui Zhang, Tao Peng, Liang Yang, Hongfei Lin

Proceedings of the Natural Language Processing and Chinese Computing, 2020

AFPun-GAN: Ambiguity-Fluency Generative Adversarial Network for Pun Generation.

Yufeng Diao, Liang Yang, Xiaochao Fan, Yonghe Chu, Di Wu, Shaowu Zhang, Hongfei Lin

Proceedings of the Natural Language Processing and Chinese Computing, 2020

Leniency to those who confess?: Predicting the Legal Judgement via Multi-Modal Analysis.

Liang Yang, Jingjie Zeng, Tao Peng, Xi Luo, Jinghui Zhang, Hongfei Lin

Proceedings of the ICMI '20: International Conference on Multimodal Interaction, 2020

Multi-level Semantic Representation Model for Code Search.

Donzhen Wen, Liang Yang, Yingying Zhang, Yuan Lin, Kan Xu, Hongfei Lin

Proceedings of the Joint Conference of the Information Retrieval Communities in Europe (CIRCLE 2020), 2020

ALBERT-BiLSTM for Sequential Metaphor Detection.

Shuqun Li, Jingjie Zeng, Jinhui Zhang, Tao Peng, Liang Yang, Hongfei Lin

Proceedings of the Second Workshop on Figurative Language Processing, 2020

2019

Spatio-Temporal Interpolated Echo State Network for Meteorological Series Prediction.

Meiling Xu, Yuanzhe Yang, Min Han, Tie Qiu, Hongfei Lin

IEEE Trans. Neural Networks Learn. Syst., 2019

Hybrid Regularized Echo State Network for Multivariate Chaotic Time Series Prediction.

Meiling Xu, Min Han, Tie Qiu, Hongfei Lin

IEEE Trans. Cybern., 2019

Learning to Refine Expansion Terms for Biomedical Information Retrieval Using Semantic Resources.

Bo Xu, Hongfei Lin, Yuan Lin

IEEE ACM Trans. Comput. Biol. Bioinform., 2019

A Novel Orthogonal Extreme Learning Machine for Regression and Classification Problems.

Licheng Cui, Huawei Zhai, Hongfei Lin

Symmetry, 2019

Detecting adverse drug reactions from social media based on multi-channel convolutional neural networks.

Chen Shen, Hongfei Lin, Kai Guo, Kan Xu, Zhihao Yang, Jian Wang

Neural Comput. Appl., 2019

Learning to rank using multiple loss functions.

Yuan Lin, Jiajin Wu, Bo Xu, Kan Xu, Hongfei Lin

Int. J. Mach. Learn. Cybern., 2019

Relation path feature embedding based convolutional neural network method for drug discovery.

Di Zhao, Jian Wang, Shengtian Sang, Hongfei Lin, Jiabin Wen, Chunmei Yang

BMC Medical Informatics Decis. Mak., 2019

A hybrid deep neural network model for query intent classification.

Bo Xu, Yunlong Ma, Hongfei Lin

J. Intell. Fuzzy Syst., 2019

Intelligent multi-document summarization for biomedical literature by word embeddings and graph-based ranking.

Chen Shen, Hongfei Lin, Huihui Hao, Zhihao Yang, Jian Wang, Shaowu Zhang

J. Intell. Fuzzy Syst., 2019

Extracting drug-drug interactions with hybrid bidirectional gated recurrent unit and graph convolutional network.

Di Zhao, Jian Wang, Hongfei Lin, Zhihao Yang, Yijia Zhang

J. Biomed. Informatics, 2019

Neural network-based approaches for biomedical relation classification: A review.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yuanyuan Sun, Bo Xu, Zhehuan Zhao

J. Biomed. Informatics, 2019

Incorporating query constraints for autoencoder enhanced ranking.

Bo Xu, Hongfei Lin, Yuan Lin, Kan Xu

Neurocomputing, 2019

Chemical-protein interaction extraction from biomedical literature: a hierarchical recurrent convolutional neural network method.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Int. J. Data Min. Bioinform., 2019

KeSACNN: a protein-protein interaction article classification approach based on deep neural network.

Ling Luo, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

Int. J. Data Min. Bioinform., 2019

FGFIREM: A feature generation framework based on information retrieval evaluation measures.

Yuan Lin, Bo Xu, Hongfei Lin, Kan Xu, Ping Zhang

Expert Syst. Appl., 2019

Chemical-protein Interaction Extraction via Gaussian Probability Distribution and External Biomedical Knowledge.

Cong Sun, Zhihao Yang, Leilei Su, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

CoRR, 2019

Globality-Locality Preserving Maximum Variance Extreme Learning Machine.

Yonghe Chu, Hongfei Lin, Liang Yang, Yufeng Diao, Dongyu Zhang, Shaowu Zhang, Xiaochao Fan, Chen Shen, Deqin Yan

Complex., 2019

Improving User Attribute Classification with Text and Social Network Attention.

Yumeng Li, Liang Yang, Bo Xu, Jian Wang, Hongfei Lin

Cogn. Comput., 2019

Adverse drug reaction detection via a multihop self-attention mechanism.

Tongxuan Zhang, Hongfei Lin, Yuqi Ren, Liang Yang, Bo Xu, Zhihao Yang, Jian Wang, Yijia Zhang

BMC Bioinform., 2019

A supervised term ranking model for diversity enhanced biomedical information retrieval.

Bo Xu, Hongfei Lin, Liang Yang, Kan Xu, Yi-Jia Zhang, Dongyu Zhang, Zhihao Yang, Jian Wang, Yuan Lin, Fuliang Yin

BMC Bioinform., 2019

Chemical-protein interaction extraction via contextualized word representations and multihead attention.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yuanyuan Sun

Database J. Biol. Databases Curation, 2019

Biomedical event trigger detection with convolutional highway neural network and extreme learning machine.

Chen Shen, Hongfei Lin, Xiaochao Fan, Yonghe Chu, Zhihao Yang, Jian Wang, Shaowu Zhang

Appl. Soft Comput., 2019

Detection of protein complexes from multiple protein interaction networks using graph embedding.

Xiaoxia Liu, Zhihao Yang, Shengtian Sang, Hongfei Lin, Jian Wang, Bo Xu

Artif. Intell. Medicine, 2019

Combining the Attention Network and Semantic Representation for Chinese Verb Metaphor Identification.

Dongyu Zhang, Hongfei Lin, Xikai Liu, Heting Zhang, Shaowu Zhang

IEEE Access, 2019

Extracting Emotion Causes Using Learning to Rank Methods From an Information Retrieval Perspective.

Bo Xu, Hongfei Lin, Yuan Lin, Yufeng Diao, Liang Yang, Kan Xu

IEEE Access, 2019

Detection of Depression-Related Posts in Reddit Social Media Forum.

Michael M. Tadesse, Hongfei Lin, Bo Xu, Liang Yang

IEEE Access, 2019

A Deep Learning Approach With Deep Contextualized Word Representations for Chemical-Protein Interaction Extraction From Biomedical Literature.

Cong Sun, Zhihao Yang, Ling Luo, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

IEEE Access, 2019

GrEDeL: A Knowledge Graph Embedding Based Method for Drug Discovery From Biomedical Literatures.

Shengtian Sang, Zhihao Yang, Xiaoxia Liu, Lei Wang, Hongfei Lin, Jian Wang, Michel Dumontier

IEEE Access, 2019

An Integrated Biomedical Event Trigger Identification Approach With a Neural Network and Weighted Extreme Learning Machine.

Xiaochao Fan, Hongfei Lin, Yufeng Diao, Yanbo Zou

IEEE Access, 2019

Judging a Book by Its Cover: The Effect of Facial Perception on Centrality in Social Networks.

Dongyu Zhang, Teng Guo, Hanxiao Pan, Jie Hou, Zhitao Feng, Liang Yang, Hongfei Lin, Feng Xia

Proceedings of the World Wide Web Conference, 2019

Heterographic Pun Recognition via Pronunciation and Spelling Understanding Gated Attention Network.

Yufeng Diao, Hongfei Lin, Liang Yang, Xiaochao Fan, Di Wu, Dongyu Zhang, Kan Xu

Proceedings of the World Wide Web Conference, 2019

DUTIR at TREC 2019: Precision Medicine Track.

Jingkun Feng, Zhihao Yang, Zhiqiang Liu, Ling Luo, Hongfei Lin, Jian Wang

Proceedings of the Twenty-Eighth Text REtrieval Conference, 2019

Bi-directional Capsule Network Model for Chinese Biomedical Community Question Answering.

Tongxuan Zhang, Yuqi Ren, Michael Mesfin Tadessem, Bo Xu, Xikai Liu, Liang Yang, Zhihao Yang, Jian Wang, Hongfei Lin

Proceedings of the Natural Language Processing and Chinese Computing, 2019

Open Science Behavior of AI Industry: Collaboration Patterns and Topics from the Perspective of Cross-Institutional Authors.

Xiaoling Sun, Kun Ding, Yuan Lin, Hongfei Lin

Proceedings of the 17th International Conference on Scientometrics and Informetrics, 2019

Residual Connected Enhanced Sequential Inference Model for Natural Language Inference.

Yingdong Li, Jian Wang, Hongfei Lin, Shaowu Zhang, Zhihao Yang

Proceedings of the 14th IEEE International Conference on Intelligent Systems and Knowledge Engineering, 2019

Refining Word Representations by Manifold Learning.

Yonghe Chu, Hongfei Lin, Liang Yang, Yufeng Diao, Shaowu Zhang, Xiaochao Fan

Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence, 2019

Telling the Whole Story: A Manually Annotated Chinese Dataset for the Analysis of Humor in Jokes.

Dongyu Zhang, Heting Zhang, Xikai Liu, Hongfei Lin, Feng Xia

Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing and the 9th International Joint Conference on Natural Language Processing, 2019

A Comprehensive Verification of Transformer in Text Classification.

Xiuyuan Yang, Liang Yang, Ran Bi, Hongfei Lin

Proceedings of the Chinese Computational Linguistics - 18th China National Conference, 2019

Multi-granularity Convolutional Neural Network with Feature Fusion and Refinement for User Profiling.

Bo Xu, Michael M. Tadesse, Peng Fei, Hongfei Lin

Proceedings of the Information Retrieval - 25th China Conference, 2019

Disease Gene Prediction Based on Heterogeneous Probabilistic Hypergraph Ranking.

Feng Ding, Xiangjie Kong, Zhehuan Zhao, Feng Xia, Anfu Liu, Chenxu Bai, Bo Xu, Xiaoxia Liu, Shengtian Sang, Hongfei Lin, Zhihao Yang, Jian Wang

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2018

Improve Biomedical Information Retrieval Using Modified Learning to Rank Methods.

Bo Xu, Hongfei Lin, Yuan Lin, Yunlong Ma, Liang Yang, Jian Wang, Zhihao Yang

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

Exploring Answer Information for Question Classification in Community Question Answering.

Jian Wang, Hongfei Lin, Hualei Dong, Daping Xiong, Zhihao Yang

J. Multiple Valued Log. Soft Comput., 2018

A neural network approach to chemical and gene/protein entity recognition in patents.

Ling Luo, Zhihao Yang, Pei Yang, Yin Zhang, Lei Wang, Jian Wang, Hongfei Lin

J. Cheminformatics, 2018

An effective neural model extracting document level chemical-induced disease relations from biomedical literature.

Wei Zheng, Hongfei Lin, Zhiheng Li, Xiaoxia Liu, Zhengguang Li, Bo Xu, Yijia Zhang, Zhihao Yang, Jian Wang

J. Biomed. Informatics, 2018

A hybrid model based on neural networks for biomedical relation extraction.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Shaowu Zhang, Yuanyuan Sun, Liang Yang

J. Biomed. Informatics, 2018

Wavelet-denoising multiple echo state networks for multivariate time series prediction.

Meiling Xu, Min Han, Hongfei Lin

Inf. Sci., 2018

A document level neural model integrated domain knowledge for chemical-induced disease relations.

Wei Zheng, Hongfei Lin, Xiaoxia Liu, Bo Xu

BMC Bioinform., 2018

Bidirectional long short-term memory with CRF for detecting biomedical event trigger in FastText semantic space.

Yan Wang, Jian Wang, Hongfei Lin, Xiwei Tang, Shaowu Zhang, Lishuang Li

BMC Bioinform., 2018

SemaTyP: a knowledge graph based literature mining method for drug discovery.

Shengtian Sang, Zhihao Yang, Lei Wang, Xiaoxia Liu, Hongfei Lin, Jian Wang

BMC Bioinform., 2018

Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks.

Xiaoxia Liu, Zhihao Yang, Shengtian Sang, Ziwei Zhou, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Bo Xu

BMC Bioinform., 2018

Drug-drug interaction extraction via hierarchical RNNs on sequence and shortest dependency paths.

Yijia Zhang, Wei Zheng, Hongfei Lin, Jian Wang, Zhihao Yang, Michel Dumontier

Bioinform., 2018

An attention-based BiLSTM-CRF approach to document-level chemical named entity recognition.

Ling Luo, Zhihao Yang, Pei Yang, Yin Zhang, Lei Wang, Hongfei Lin, Jian Wang

Bioinform., 2018

Document triage for identifying protein-protein interactions affected by mutations: a neural network ensemble approach.

Ling Luo, Zhihao Yang, Hongfei Lin, Jian Wang

Database J. Biol. Databases Curation, 2018

The Identification of the Emotionality of Metaphorical Expressions Based on a Manually Annotated Chinese Corpus.

Dongyu Zhang, Hongfei Lin, Puqi Zheng, Liang Yang, Shaowu Zhang

IEEE Access, 2018

Improving Pseudo-Relevance Feedback With Neural Network-Based Word Representations.

Bo Xu, Hongfei Lin, Yuan Lin, Liang Yang, Kan Xu

IEEE Access, 2018

Personality Predictions Based on User Behavior on the Facebook Social Media Platform.

Michael M. Tadesse, Hongfei Lin, Bo Xu, Liang Yang

IEEE Access, 2018

Ensemble of Neural Networks with Sentiment Words Translation for Code-Switching Emotion Detection.

Tianchi Yue, Chen Chen, Shaowu Zhang, Hongfei Lin, Liang Yang

Proceedings of the Natural Language Processing and Chinese Computing, 2018

Stock Market Trend Prediction Using Recurrent Convolutional Neural Networks.

Bo Xu, Dongyu Zhang, Shaowu Zhang, HengChao Li, Hongfei Lin

Proceedings of the Natural Language Processing and Chinese Computing, 2018

A Normalized Encoder-Decoder Model for Abstractive Summarization Using Focal Loss.

Yunsheng Shi, Jun Meng, Jian Wang, Hongfei Lin, Yumeng Li

Proceedings of the Natural Language Processing and Chinese Computing, 2018

NLPCC 2018 Shared Task User Profiling and Recommendation Method Summary by DUTIR_9148.

Xiaoyu Chen, Jian Wang, Yuqi Ren, Tong Liu, Hongfei Lin

Proceedings of the Natural Language Processing and Chinese Computing, 2018

WECA：A WordNet-Encoded Collocation-Attention Network for Homographic Pun Recognition.

Yufeng Diao, Hongfei Lin, Di Wu, Liang Yang, Kan Xu, Zhihao Yang, Jian Wang, Shaowu Zhang, Bo Xu, Dongyu Zhang

Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, Brussels, Belgium, October 31, 2018

Chinese Emotion Commonsense Knowledge Base Construction and Its Application.

Liang Yang, Fengqing Zhou, Hongfei Lin, Jian Wang, Shaowu Zhang

Proceedings of the Chinese Lexical Semantics - 19th Workshop, 2018

DUTIR at the CCKS-2018 Task1: A Neural Network Ensemble Approach for Chinese Clinical Named Entity Recognition.

Ling Luo, Nan Li, Shuaichi Li, Zhihao Yang, Hongfei Lin

Proceedings of the Evaluation Tasks at the China Conference on Knowledge Graph and Semantic Computing (CCKS 2018), 2018

Extraction New Sentiment Words in Weibo Based on Relative Branch Entropy.

Liang Yang, Dongyu Zhang, Shaowu Zhang, Peng Fei, Hongfei Lin

Proceedings of the Information Retrieval - 24th China Conference, 2018

Full-attention Based Drug Drug Interaction Extraction Exploiting User-generated Content.

Bo Xu, Xiufeng Shi, Zhehuan Zhao, Wei Zheng, Hongfei Lin, Zhihao Yang, Jian Wang, Feng Xia

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Multipath2vec: Predicting Pathogenic Genes via Heterogeneous Network Embedding.

Bo Xu, Yu Liu, Shuo Yu, Lei Wang, Lei Liu, Hongfei Lin, Zhihao Yang, Jian Wang, Feng Xia

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Protein Complexes Detection Based on Global Network Representation Learning.

Bo Xu, Kun Li, Xiaoxia Liu, Delong Liu, Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Feng Xia

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A Weak Supervised Learning Method for Essential Protein Detection Based on STRING Database and Learning Representation.

Zhizheng Wang, Yuanyuan Sun, Yawen Guan, Yibin Zhang, Liang Yang, Kan Xu, Yijia Zhang, Hongfei Lin

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Hierarchical Recurrent Convolutional Neural Network for Chemical-protein Relation Extraction from Biomedical Literature.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A Knowledge Graph based Bidirectional Recurrent Neural Network Method for Literature-based Discovery.

Shengtian Sang, Zhihao Yang, Xiaoxia Liu, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Protein-Protein Interaction Article Classification: A Knowledge-enriched Self-Attention Convolutional Neural Network Approach.

Ling Luo, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

PC-SENE: A node embedding based method for protein complex detection.

Xiaoxia Liu, Zhihao Yang, Shengtian Sang, Lei Wang, Yin Zhang, Hongfei Lin, Bo Xu, Yijia Zhang, Liang Yang, Kan Xu, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

HMNPPID: A Database of Protein-protein Interactions Associated with Human Malignant Neoplasms.

Qingqing Li, Zhihao Yang, Zhehuan Zhao, Ling Luo, Zhiheng Li, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A multi-task learning based approach to biomedical entity relation extraction.

Qingqing Li, Zhihao Yang, Ling Luo, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Improve Diversity-oriented Biomedical Information Retrieval using Supervised Query Expansion.

Bo Xu, Hongfei Lin, Liang Yang, Kan Xu, Yijia Zhang, Dongyu Zhang, Zhihao Yang, Jian Wang, Yuan Lin, Fuliang Yin

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Construction of a Chinese Corpus for the Analysis of the Emotionality of Metaphorical Expressions.

Dongyu Zhang, Hongfei Lin, Liang Yang, Shaowu Zhang, Bo Xu

Proceedings of the 56th Annual Meeting of the Association for Computational Linguistics, 2018

2017

A multiple distributed representation method based on neural network for biomedical event extraction.

Anran Wang, Jian Wang, Hongfei Lin, Jianhai Zhang, Zhihao Yang, Kan Xu

BMC Medical Informatics Decis. Mak., 2017

Assembling Deep Neural Networks for Medical Compound Figure Detection.

Yuhai Yu, Hongfei Lin, Jiana Meng, Xiaocong Wei, Zhehuan Zhao

Inf., 2017

Deep Transfer Learning for Modality Classification of Medical Images.

Yuhai Yu, Hongfei Lin, Jiana Meng, Xiaocong Wei, Hai Guo, Zhehuan Zhao

Inf., 2017

A Convolution-LSTM-Based Deep Neural Network for Cross-Domain MOOC Forum Post Classification.

Xiaocong Wei, Hongfei Lin, Liang Yang, Yuhai Yu

Inf., 2017

Convolutional neural networks for expert recommendation in community question answering.

Jian Wang, Jiqing Sun, Hongfei Lin, Hualei Dong, Shaowu Zhang

Sci. China Inf. Sci., 2017

DIGNiFI: Discovering causative genes for orphan diseases using protein-protein interaction networks.

Xiaoxia Liu, Zhihao Yang, Hongfei Lin, Michael Simmons, Zhiyong Lu

BMC Syst. Biol., 2017

An attention-based effective neural model for drug-drug interactions extraction.

Wei Zheng, Hongfei Lin, Ling Luo, Zhehuan Zhao, Zhengguang Li, Yijia Zhang, Zhihao Yang, Jian Wang

BMC Bioinform., 2017

Low-Resource Cross-Domain Product Review Sentiment Classification Based on a CNN with an Auxiliary Large-Scale Corpus.

Xiaocong Wei, Hongfei Lin, Yuhai Yu, Liang Yang

Algorithms, 2017

Social Annotation for Query Expansion Learning from Multiple Expansion Strategies.

Yuan Lin, Bo Xu, Luying Li, Hongfei Lin, Kan Xu

Proceedings of the Social Media Processing - 6th National Conference, 2017

NLPCC 2017 Shared Task Social Media User Modeling Method Summary by DUTIR_923.

Dongzhen Wen, Liang Yang, HengChao Li, Kai Guo, Peng Fei, Hongfei Lin

Proceedings of the Natural Language Processing and Chinese Computing, 2017

First Place Solution for NLPCC 2017 Shared Task Social Media User Modeling.

Lingfei Qian, Anran Wang, Yan Wang, Yuhang Huang, Jian Wang, Hongfei Lin

Proceedings of the Natural Language Processing and Chinese Computing, 2017

Homographic Puns Recognition Based on Latent Semantic Structures.

Yufeng Diao, Liang Yang, Dongyu Zhang, Linhong Xu, Xiaochao Fan, Di Wu, Hongfei Lin

Proceedings of the Natural Language Processing and Chinese Computing, 2017

Detecting Potential Adverse Drug Reactions Using Association Rules and Embedding Models.

Kai Guo, Hongfei Lin, Bo Xu, Zhihao Yang, Jian Wang, Yuanyuan Sun, Kan Xu

Proceedings of the Bioinformatics Research and Applications - 13th International Symposium, 2017

Learning to Rank with Query-level Semi-supervised Autoencoders.

Bo Xu, Hongfei Lin, Yuan Lin, Kan Xu

Proceedings of the 2017 ACM on Conference on Information and Knowledge Management, 2017

Tripartite-Replicated Softmax Model for Document Representations.

Bo Xu, Hongfei Lin, Lin Wang, Yuan Lin, Kan Xu, Xiaocong Wei, Dong Huang

Proceedings of the Information Retrieval - 23rd China conference, 2017

Musical Query-by-Semantic-Description Based on Convolutional Neural Network.

Jing Qin, Hongfei Lin, Dongyu Zhang, Shaowu Zhang, Xiaocong Wei

Proceedings of the Information Retrieval - 23rd China conference, 2017

A hybrid protein-protein interaction triple extraction method for biomedical literature.

Zhehuan Zhao, Zhihao Yang, Cong Sun, Lei Wang, Hongfei Lin

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Biomedical event trigger detection based on bidirectional LSTM and CRF.

Yan Wang, Jian Wang, Hongfei Lin, Shaowu Zhang, Lishuang Li

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2016

A graph kernel based on context vectors for extracting drug-drug interactions.

Wei Zheng, Hongfei Lin, Zhehuan Zhao, Bo Xu, Yijia Zhang, Zhihao Yang, Jian Wang

J. Biomed. Informatics, 2016

Assessment of learning to rank methods for query expansion.

Bo Xu, Hongfei Lin, Yuan Lin

J. Assoc. Inf. Sci. Technol., 2016

Combining local and global information for product feature extraction in opinion documents.

Liang Yang, Bing Liu, Hongfei Lin, Yuan Lin

Inf. Process. Lett., 2016

Granular transfer learning using type-2 fuzzy HMM for text sequence recognition.

Shichang Sun, Jian Yun, Hongfei Lin, Nanxun Zhang, Ajith Abraham, Hongbo Liu

Neurocomputing, 2016

A protein-protein interaction extraction approach based on deep neural network.

Zhehuan Zhao, Zhihao Yang, Hongfei Lin, Jian Wang, Song Gao

Int. J. Data Min. Bioinform., 2016

Biomedical event trigger detection based on convolutional neural network.

Jian Wang, Honglei Li, Yuan An, Hongfei Lin, Zhihao Yang

Int. J. Data Min. Bioinform., 2016

Detection and Extraction of Hot Topics on Chinese Microblogs.

Liang Yang, Hongfei Lin, Yuan Lin, Shengbo Liu

Cogn. Comput., 2016

A method for predicting protein complex in dynamic PPI networks.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yiwei Liu, Shengtian Sang

BMC Bioinform., 2016

Construction of dynamic probabilistic protein interaction networks for protein complex identification.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang

BMC Bioinform., 2016

Improving biomedical information retrieval by linear combinations of different query expansion techniques.

Ahmed AbdoAziz Ahmed Abdulla, Hongfei Lin, Bo Xu, Santosh Kumar Banbhrani

BMC Bioinform., 2016

Drug drug interaction extraction from biomedical literature using syntax convolutional neural network.

Zhehuan Zhao, Zhihao Yang, Ling Luo, Hongfei Lin, Jian Wang

Bioinform., 2016

Visual and Textual Sentiment Analysis of a Microblog Using Deep Convolutional Neural Networks.

Yuhai Yu, Hongfei Lin, Jiana Meng, Zhehuan Zhao

Algorithms, 2016

Generating User-oriented Text Summarization Based on Social Networks Using Topic Models.

Bo Xu, Hongfei Lin, Huihui Hao, Zhihao Yang, Jian Wang, Shaowu Zhang

Proceedings of the Social Media Processing - 5th National Conference, 2016

Predicting Best Answerers for New Questions: An Approach Leveraging Convolution Neural Networks in Community Question Answering.

Jian Wang, Jiqing Sun, Hongfei Lin, Hualei Dong, Shaowu Zhang

Proceedings of the Social Media Processing - 5th National Conference, 2016

Detecting Potential Adverse Drug Reactions from Health-Related Social Networks.

Bo Xu, Hongfei Lin, Mingzhen Zhao, Zhihao Yang, Jian Wang, Shaowu Zhang

Proceedings of the Natural Language Understanding and Intelligent Applications, 2016

DUTIR in BioNLP-ST 2016: Utilizing Convolutional Network and Distributed Representation to Extract Complicate Relations.

Honglei Li, Jianhai Zhang, Jian Wang, Hongfei Lin, Zhihao Yang

Proceedings of the 4th BioNLP Shared Task Workshop, BioNLP 2016, 2016

Disease-specific protein complex detection in the human protein interaction network with a supervised learning method.

Ziwei Zhou, Yingyi Gui, Zhihao Yang, Xiaoxia Liu, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

ML-CNN: A novel deep learning based disease named entity recognition architecture.

Zhehuan Zhao, Zhihao Yang, Ling Luo, Yin Zhang, Lei Wang, Hongfei Lin, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

Biomedical event extraction based on distributed representation and deep learning.

Anran Wang, Jian Wang, Hongfei Lin, Jianhai Zhang, Zhihao Yang, Kan Xu

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

CIDExtractor: A chemical-induced disease relation extraction system for biomedical literature.

Zhiheng Li, Zhihao Yang, Hongfei Lin, Jian Wang, Yingyi Gui, Yin Zhang, Lei Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

Patent Retrieval Based on Multiple Information Resources.

Kan Xu, Hongfei Lin, Yuan Lin, Bo Xu, Liang Yang, Shaowu Zhang

Proceedings of the Information Retrieval Technology, 2016

Learning to Rank with Likelihood Loss Functions.

Yuan Lin, Liang Yang, Bo Xu, Hongfei Lin, Kan Xu

Proceedings of the Information Retrieval Technology, 2016

2015

How we collaborate: characterizing, modeling and predicting scientific collaborations.

Xiaoling Sun, Hongfei Lin, Kan Xu, Kun Ding

Scientometrics, 2015

Group-enhanced ranking.

Yuan Lin, Hongfei Lin, Kan Xu, Ajith Abraham, Hongbo Liu

Neurocomputing, 2015

A social network model driven by events and interests.

Xiaoling Sun, Hongfei Lin, Kan Xu

Expert Syst. Appl., 2015

Integrating experimental and literature protein-protein interaction data for protein complex prediction.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang

BMC Genom., 2015

Predicting User Relationship from Scratch.

Xiaoxia Liu, Hongfei Lin, Zhihao Yang

Proceedings of the Social Media Processing - 4th National Conference, 2015

A Cross-Domain Sentiment Classification Method Based on Extraction of Key Sentiment Sentence.

Shaowu Zhang, Huali Liu, Liang Yang, Hongfei Lin

Proceedings of the Natural Language Processing and Chinese Computing - 4th CCF Conference, 2015

Predicting Best Answerers for New Questions: An Approach Leveraging Distributed Representations of Words in Community Question Answering.

Hualei Dong, Jian Wang, Hongfei Lin, Bo Xu, Zhihao Yang

Proceedings of the Ninth International Conference on Frontier of Computer Science and Technology, 2015

Incorporating Sample Filtering into Subject-Based Ensemble Model for Cross-Domain Sentiment Classification.

Liang Yang, Shaowu Zhang, Hongfei Lin, Xianhui Wei

Proceedings of the Chinese Computational Linguistics and Natural Language Processing Based on Naturally Annotated Big Data, 2015

Deep neural network based protein-protein interaction extraction from biomedical literature.

Zhehuan Zhao, Zhihao Yang, Ling Luo, Hongfei Lin, Jian Wang, Song Gao

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

Discover potential adverse drug reactions using the skip-gram model.

Mingzhen Zhao, Bo Xu, Hongfei Lin, Zhihao Yang, Jian Wang

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

Learning to rank for biomedical information retrieval.

Bo Xu, Hongfei Lin, Yuan Lin, Yunlong Ma, Liang Yang, Jian Wang, Zhihao Yang

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

Biomedical event trigger detection by dependency-based word embedding.

Jian Wang, Jianhai Zhang, Yuan An, Hongfei Lin, Zhihao Yang, Yijia Zhang, Yuanyuan Sun

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014

Learning to rank-based gene summary extraction.

Yue Shang, Huihui Hao, Jiajin Wu, Hongfei Lin

BMC Bioinform., 2014

Enhancing the accuracy of knowledge discovery: a supervised learning method.

Liangxi Cheng, Hongfei Lin, Feng Zhou, Zhihao Yang, Jian Wang

BMC Bioinform., 2014

Audio Retrieval Based on Manifold Ranking.

Jing Qin, Xinyue Liu, Hongfei Lin

Proceedings of the Sixth International Symposium on Parallel Architectures, 2014

GPQ: Directly Optimizing Q-measure based on Genetic Programming.

Yuan Lin, Hongfei Lin, Ping Zhang, Bo Xu

Proceedings of the 23rd ACM International Conference on Conference on Information and Knowledge Management, 2014

Data integration and supervised learning based protein complex detection method.

Fengying Yu, Zhihao Yang, Xiaohua Hu, Yuanyuan Sun, Hongfei Lin, Jian Wang

Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

Deep graph search based disease related knowledge summarization from biomedical literature.

Xiaofang Wu, Zhihao Yang, Zhiheng Li, Yuanyuan Sun, Hongfei Lin, Jian Wang

Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

Exploring the relation between the characteristics of protein interaction networks and the performances of computational complex detection methods.

Xiaoxia Liu, Zhihao Yang, Ziwei Zhou, Yuanyuan Sun, Hongfei Lin, Jian Wang

Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

2013

Protein Complex Prediction in Large Ontology Attributed Protein-Protein Interaction Networks.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yanpeng Li, Bo Xu

IEEE ACM Trans. Comput. Biol. Bioinform., 2013

Combating Web spam through trust-distrust propagation with confidence.

Xinyue Liu, You Wang, Shaoping Zhu, Hongfei Lin

Pattern Recognit. Lett., 2013

Exploring Useful Features for Biomedical Event Trigger Detection.

Jian Wang, Qian Xu, Hongfei Lin, Zhihao Yang, Yanpeng Li

J. Multiple Valued Log. Soft Comput., 2013

Topical community detection from mining user tagging behavior and interest.

Xiaoling Sun, Hongfei Lin

J. Assoc. Inf. Sci. Technol., 2013

Learning to rank using smoothing methods for language modeling.

Yuan Lin, Hongfei Lin, Kan Xu, Xiaoling Sun

J. Assoc. Inf. Sci. Technol., 2013

A Time-Sensitive Model for Microblog Retrieval.

Cunhui Shi, Bo Xu, Hongfei Lin, Qing Guo

Proceedings of the Natural Language Processing and Chinese Computing, 2013

Integrating multiple biomedical resources for protein complex prediction.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Bo Xu

Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

Predicting protein complexes in protein interaction networks: A supervised learning based method.

Fengying Yu, Zhihao Yang, Nan Tang, Jiajin Wu, Hongfei Lin, Jian Wang

Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

Enhancing the accuracy of knowledge discovery: A supervised learning method.

Liangxi Cheng, Hongfei Lin, Feng Zhou, Zhihao Yang

Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012

Hash Subgraph Pairwise Kernel for Protein-Protein Interaction Extraction.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yanpeng Li

IEEE ACM Trans. Comput. Biol. Bioinform., 2012

An Improved HITS Algorithm Based on Page-query Similarity and Page Popularity.

Xinyue Liu, Hongfei Lin, Cong Zhang

J. Comput., 2012

An Attractive Force Model for Weighting Links in Query-Dependant Web Page Ranking.

Xinyue Liu, Hongfei Lin, Liguo Zhang

J. Comput., 2012

Mining a multilingual association dictionary from Wikipedia for cross-language information retrieval.

Zheng Ye, Jimmy Xiangji Huang, Ben He, Hongfei Lin

J. Assoc. Inf. Sci. Technol., 2012

Twitter part-of-speech tagging using pre-classification Hidden Markov model.

Shichang Sun, Hongbo Liu, Hongfei Lin, Ajith Abraham

Proceedings of the IEEE International Conference on Systems, Man, and Cybernetics, 2012

EMIR: A Novel Music Retrieval System for Mobile Devices Incorporating Analysis of User Emotion.

Lijuan Marissa Zhou, Hongfei Lin, Cathal Gurrin

Proceedings of the Advances in Multimedia Modeling - 18th International Conference, 2012

Transfer learning based on graph ranking.

Jiana Meng, Hongfei Lin

Proceedings of the 9th International Conference on Fuzzy Systems and Knowledge Discovery, 2012

Construction and Application of Chinese Emotional Corpus.

Liang Yang, Hongfei Lin

Proceedings of the Chinese Lexical Semantics - 13th Workshop, 2012

PPIExtractor: A protein-protein interaction Extractor for biomédical literature.

Zhihao Yang, Zhehuan Zhao, Yanpeng Li, Yuncui Hu, Hongfei Lin

Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

Classifying protein complexes from candidate subgraphs using fuzzy machine learning model.

Bo Xu, Hongfei Lin, Zhihao Yang, Kavishwar B. Wagholikar, Hongfang Liu

Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

A syntactic rule-based method for automatic pathway information extraction from biomédical literature.

Yanhua Wang, Zhihao Yang, Hongfei Lin, Yanpeng Li

Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

Combining labeled and unlabeled data for biomédical event extraction.

Jian Wang, Qian Xu, Hongfei Lin, Zhihao Yang, Yanpeng Li

Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

Where Are You Settling Down: Geo-locating Twitter Users Based on Tweets and Social Networks.

Kejiang Ren, Shaowu Zhang, Hongfei Lin

Proceedings of the Information Retrieval Technology, 2012

Sells Out or Piles Up? A Sentiment Autoregressive Model for Predicting Sales Performance.

Xueni Li, Shaowu Zhang, Liang Yang, Hongfei Lin

Proceedings of the Information Retrieval Technology, 2012

Query Expansion Based on User Quality in Folksonomy.

Qing Guo, Wenfei Liu, Yuan Lin, Hongfei Lin

Proceedings of the Information Retrieval Technology, 2012

Feature Transformation Method Enhanced Vandalism Detection in Wikipedia.

Tianshu Chang, Hongfei Lin, Yuan Lin

Proceedings of the Information Retrieval Technology, 2012

2011

A Framework for Semisupervised Feature Generation and Its Applications in Biomedical Literature Mining.

Yanpeng Li, Xiaohua Hu, Hongfei Lin, Zhiahi Yang

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

Query by Humming Systems Using Melody Matching Model Based on the Genetic Algorithm.

Jing Qin, Hongfei Lin, Xinyue Liu

J. Softw., 2011

Topic Detection with Hypergraph Partition Algorithm.

Xinyue Liu, Fenglong Ma, Hongfei Lin

J. Softw., 2011

Segmenting Webpage with Gomory-Hu Tree Based Clustering.

Xinyue Liu, Hongfei Lin, Ye Tian

J. Softw., 2011

Neighborhood hash graph kernel for protein-protein interaction extraction.

Yijia Zhang, Hongfei Lin, Zhihao Yang, Yanpeng Li

J. Biomed. Informatics, 2011

Finding a good query-related topic for boosting pseudo-relevance feedback.

Zheng Ye, Jimmy Xiangji Huang, Hongfei Lin

J. Assoc. Inf. Sci. Technol., 2011

Incorporating rich features to boost information retrieval performance: A SVM-regression based re-ranking approach.

Zheng Ye, Jimmy Xiangji Huang, Hongfei Lin

Expert Syst. Appl., 2011

Combining multiple disambiguation methods for gene mention normalization.

Ning Xia, Hongfei Lin, Zhihao Yang, Yanpeng Li

Expert Syst. Appl., 2011

Knowledge transfer based on feature representation mapping for text classification.

Jiana Meng, Hongfei Lin, Yanpeng Li

Expert Syst. Appl., 2011

Passage retrieval based hidden knowledge discovery from biomedical literature.

Ran Chen, Hongfei Lin, Zhihao Yang

Expert Syst. Appl., 2011

An improved spectral clustering algorithm based on local neighbors in kernel space.

Xinyue Liu, Xing Yong, Hongfei Lin

Comput. Sci. Inf. Syst., 2011

A two-stage feature selection method for text categorization.

Jiana Meng, Hongfei Lin, Yuhai Yu

Comput. Math. Appl., 2011

Multiple kernel learning in protein-protein interaction extraction from biomedical literature.

Zhihao Yang, Nan Tang, Xiao Zhang, Hongfei Lin, Yanpeng Li, Zhiwei Yang

Artif. Intell. Medicine, 2011

DUTIR at TREC 2011 Chemistry Track.

Ping Zhang, Hongfei Lin, Jiajin Wu, Yuan Lin

Proceedings of The Twentieth Text REtrieval Conference, 2011

DUTIR at TREC 2011 Microblog Track.

Cunhui Shi, Kejiang Ren, Hongfei Lin, Shaowu Zhang

Proceedings of The Twentieth Text REtrieval Conference, 2011

DUTIR at the Session Track in TREC 2011.

Wenfei Liu, Hongfei Lin, Yunlong Ma, Tianshu Chang

Proceedings of The Twentieth Text REtrieval Conference, 2011

A hybrid PSO-Viterbi algorithm for HMMs parameters weighting in Part-of-Speech tagging.

Shichang Sun, Hongfei Lin, Hongbo Liu

Proceedings of the Third International Conference of Soft Computing and Pattern Recognition, 2011

Learning to rank using query-level regression.

Jiajin Wu, Zhihao Yang, Yuan Lin, Hongfei Lin, Zheng Ye, Kan Xu

Proceedings of the Proceeding of the 34th International ACM SIGIR Conference on Research and Development in Information Retrieval, 2011

Social annotation in query expansion: a machine learning approach.

Yuan Lin, Hongfei Lin, Song Jin, Zheng Ye

Proceedings of the Proceeding of the 34th International ACM SIGIR Conference on Research and Development in Information Retrieval, 2011

A Bayesian network approach to context sensitive query expansion.

Zheng Ye, Xiangji Huang, Hongfei Lin

Proceedings of the 2011 ACM Symposium on Applied Computing (SAC), TaiChung, Taiwan, March 21, 2011

Active Semi-supervised Spectral Clustering.

Xinyue Liu, Linlin Zong, Xianchao Zhang, Hongfei Lin

Proceedings of the Fourth International Symposium on Parallel Architectures, 2011

Selecting related terms in query-logs using two-stage SimRank.

Yunlong Ma, Hongfei Lin, Yuan Lin

Proceedings of the 20th ACM Conference on Information and Knowledge Management, 2011

Learning to rank with cross entropy.

Yuan Lin, Hongfei Lin, Jiajin Wu, Kan Xu

Proceedings of the 20th ACM Conference on Information and Knowledge Management, 2011

Identifying Protein Complexes from PPI Networks Using GO Semantic Similarity.

Jian Wang, Dong Xie, Hongfei Lin, Zhihao Yang, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011

Learning to Rank by Optimizing Expected Reciprocal Rank.

Ping Zhang, Hongfei Lin, Yuan Lin, Jiajin Wu

Proceedings of the Information Retrieval Technology, 2011

2010

Corpus-based Extraction of Chinese Historical Term Translation Equivalents.

Xiuying Li, Chao Che, Xiaoxia Liu, Hongfei Lin, Rongpei Wang

Int. J. Asian Lang. Process., 2010

BioPPISVMExtractor: A protein-protein interaction extractor for biomedical literature using SVM and rich feature sets.

Zhihao Yang, Hongfei Lin, Yanpeng Li

J. Biomed. Informatics, 2010

Learning an enriched representation from unlabeled data for protein-protein interaction extraction.

Yanpeng Li, Xiaohua Hu, Hongfei Lin, Zhihao Yang

BMC Bioinform., 2010

Hypergraph Partition with Harmonic Average Top-N and PCA for Topic Detection.

Xinyue Liu, Fenglong Ma, Hongfei Lin, Hong Shen

Proceedings of the Third International Symposium on Parallel Architectures, 2010

A two-stage feature selection method for text categorization.

Jiana Meng, Hongfei Lin

Proceedings of the Seventh International Conference on Fuzzy Systems and Knowledge Discovery, 2010

Learning to rank with groups.

Yuan Lin, Hongfei Lin, Zheng Ye, Song Jin, Xiaoling Sun

Proceedings of the 19th ACM Conference on Information and Knowledge Management, 2010

Ranking SVM for multiple kernels output combination in protein-protein interaction extraction from biomedical literature.

Zhihao Yang, Yuan Lin, Jiajin Wu, Nan Tang, Hongfei Lin, Yanpeng Li

Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

Ontology integration to identify protein complex in protein interaction networks.

Bo Xu, Hongfei Lin, Zhihao Yang

Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

Exploring Social Annotation Tags to Enhance Information Retrieval Performance.

Zheng Ye, Jimmy Xiangji Huang, Song Jin, Hongfei Lin

Proceedings of the Active Media Technology, 6th International Conference, 2010

Revisiting Rocchio's Relevance Feedback Algorithm for Probabilistic Models.

Zheng Ye, Ben He, Xiangji Huang, Hongfei Lin

Proceedings of the Information Retrieval Technology, 2010

A Revised SimRank Approach for Query Expansion.

Yunlong Ma, Hongfei Lin, Song Jin

Proceedings of the Information Retrieval Technology, 2010

Emotion Tag Based Music Retrieval Algorithm.

Jing Li, Hongfei Lin, Lijuan Marissa Zhou

Proceedings of the Information Retrieval Technology, 2010

K-means and Graph-based Approaches for Chinese Word Sense Induction Task.

Lisha Wang, Yanzhao Dou, Xiaoling Sun, Hongfei Lin

Proceedings of the CIPS-SIGHAN Joint Conference on Chinese Language Processing, 2010

2009

BioPPIExtractor: A protein-protein interaction extraction system for biomedical literature.

Zhihao Yang, Hongfei Lin, Baodong Wu

Expert Syst. Appl., 2009

Uncertainty sampling-based active learning for protein-protein interaction extraction from biomedical literature.

Baojin Cui, Hongfei Lin, Zhihao Yang

Expert Syst. Appl., 2009

Incorporating rich background knowledge for gene named entity classification and recognition.

Yanpeng Li, Hongfei Lin, Zhihao Yang

BMC Bioinform., 2009

York University at TREC 2009: Relevance Feedback Track.

Zheng Ye, Xiangji Huang, Ben He, Hongfei Lin

Proceedings of The Eighteenth Text REtrieval Conference, 2009

DUTIR at TREC 2009: Chemical IR Track.

Song Jin, Zheng Ye, Hongfei Lin

Proceedings of The Eighteenth Text REtrieval Conference, 2009

A graph-based approach to mining multilingual word associations from wikipedia.

Zheng Ye, Xiangji Huang, Hongfei Lin

Proceedings of the 32nd Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, 2009

Study on question answering system for biomedical domain.

Bo Xu, Hongfei Lin, Baoyan Liu

Proceedings of the 2009 IEEE International Conference on Granular Computing, 2009

Query expansion based on folksonomy tag co-occurrence analysis.

Song Jin, Hongfei Lin, Sui Su

Proceedings of the 2009 IEEE International Conference on Granular Computing, 2009

Towards A Better Performance for Medical Image Retrieval Using An Integrated Approach.

Zheng Ye, Xiangji Huang, Hongfei Lin

Proceedings of the Working Notes for CLEF 2009 Workshop co-located with the 13th European Conference on Digital Libraries (ECDL 2009) , Corfù, Greece, September 30, 2009

An Integrated Approach for Medical Image Retrieval through Combining Textual and Visual Features.

Zheng Ye, Xiangji Huang, Qinmin Hu, Hongfei Lin

Proceedings of the Multilingual Information Access Evaluation II. Multimedia Experiments, 2009

Applying Feature Coupling Generalization for Protein-Protein Interaction Extraction.

Yanpeng Li, Hongfei Lin, Zhihao Yang

Proceedings of the 2009 IEEE International Conference on Bioinformatics and Biomedicine, 2009

A Boosting Approach for Learning to Rank Using SVD with Partially Labeled Data.

Yuan Lin, Hongfei Lin, Zhihao Yang, Sui Su

Proceedings of the Information Retrieval Technology, 2009

2008

Exploiting the contextual cues for bio-entity name recognition in biomedical literature.

Zhihao Yang, Hongfei Lin, Yanpeng Li

J. Biomed. Informatics, 2008

Exploiting the performance of dictionary-based bio-entity name recognition in biomedical literature.

Zhihao Yang, Hongfei Lin, Yanpeng Li

Comput. Biol. Chem., 2008

DUTIR at TREC 2008 Relevance Feedback Track.

Xiaoling Sun, Yuan Lin, Hongfei Lin, Zhihao Yang

Proceedings of The Seventeenth Text REtrieval Conference, 2008

DUTIR at TREC 2008 Blog Track.

Jianmei Chen, Wei Guo, Fengming Pan, Fuyang Chang, Rui Song, Hongfei Lin

Proceedings of The Seventeenth Text REtrieval Conference, 2008

Research on Focal Figures-Oriented Sentimental Question Answering.

Qin Tang, Hongfei Lin, Rui Song

Proceedings of the ALPIT 2008, 2008

Automatic Opinion Analysis Based on SVM and Distance-Weighted Computing.

Wei Guo, Hongfei Lin

Proceedings of the ALPIT 2008, 2008

Enhancing Biomedical Named Entity Classification Using Terabyte Unlabeled Data.

Yanpeng Li, Hongfei Lin, Zhihao Yang

Proceedings of the Information Retrieval Technology, 2008

2007

DUTIR at TREC 2007 Genomics Track.

Zhihao Yang, Hongfei Lin, Baojin Cui, Yanpeng Li, Xiao Zhang

Proceedings of The Sixteenth Text REtrieval Conference, 2007

DUTIR at TREC 2007 Blog Track.

Rui Song, Qin Tang, Daming Shi, Hongfei Lin, Zhihao Yang

Proceedings of The Sixteenth Text REtrieval Conference, 2007

DUTIR at TREC 2007 Enterprise Track.

Jianmei Chen, Hui Ren, Linhong Xu, Hongfei Lin, Zhihao Yang

Proceedings of The Sixteenth Text REtrieval Conference, 2007

Incorporating Dictionary Features into Conditional Random Fields for Gene/Protein Named Entity Recognition.

Hongfei Lin, Yanpeng Li, Zhihao Yang

Proceedings of the Emerging Technologies in Knowledge Discovery and Data Mining, 2007

Two Phase Indexes Based Passage Retrieval in Biomedical Texts.

Ran Chen, Hongfei Lin, Zhihao Yang

Proceedings of the Bio-Inspired Computational Intelligence and Applications, 2007

Ontology-Driven Affective Chinese Text Analysis and Evaluation Method.

Linhong Xu, Hongfei Lin

Proceedings of the Affective Computing and Intelligent Interaction, 2007

2006

DUTIR at TREC 2006: Genomics and Enterprise Tracks.

Zhihao Yang, Hongfei Lin, Yanpeng Li, Linhong Xu, Yu Pan, Baoyan Liu

Proceedings of the Fifteenth Text REtrieval Conference, 2006

2005

TREC 2005 Genomics Track Experiments at DUTAI.

Zhihao Yang, Hongfei Lin, Yanpeng Li, Baoyan Liu, Ye Lu

Proceedings of the Fourteenth Text REtrieval Conference, 2005

1999

Example-Based Chinese Text Filtering Model.

Hongfei Lin, Xuegang Zhan, Tianshun Yao

Proceedings of the Internet Applications, 5th International Computer Science Conference, 1999