Yu Xue

According to our database1, Yu Xue authored at least 146 papers between 2005 and 2019.

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Bibliography

2019
Fast and Accurate Classification of Time Series Data Using Extended ELM: Application in Fault Diagnosis of Air Handling Units.
IEEE Trans. Systems, Man, and Cybernetics: Systems, 2019

A hybrid biogeography-based optimization and fuzzy C-means algorithm for image segmentation.
Soft Comput., 2019

A feasible density peaks clustering algorithm with a merging strategy.
Soft Comput., 2019

iEKPD 2.0: an update with rich annotations for eukaryotic protein kinases, protein phosphatases and proteins containing phosphoprotein-binding domains.
Nucleic Acids Research, 2019

Unsupervised feature selection based on self-representation sparse regression and local similarity preserving.
Int. J. Machine Learning & Cybernetics, 2019

A novel density peaks clustering with sensitivity of local density and density-adaptive metric.
Knowl. Inf. Syst., 2019

A review on multi-class TWSVM.
Artif. Intell. Rev., 2019

Large-Scale Feedforward Neural Network Optimization by a Self-Adaptive Strategy and Parameter Based Particle Swarm Optimization.
IEEE Access, 2019

2018
A Grouping Particle Swarm Optimizer with Personal-Best-Position Guidance for Large Scale Optimization.
IEEE/ACM Trans. Comput. Biology Bioinform., 2018

Robust Dynamic Multi-Objective Vehicle Routing Optimization Method.
IEEE/ACM Trans. Comput. Biology Bioinform., 2018

Improved gene expression programming to solve the inverse problem for ordinary differential equations.
Swarm and Evolutionary Computation, 2018

A novel cluster validity index for fuzzy C-means algorithm.
Soft Comput., 2018

A self-adaptive artificial bee colony algorithm based on global best for global optimization.
Soft Comput., 2018

Recognizing the human attention state using cardiac pulse from the noncontact and automatic-based measurements.
Soft Comput., 2018

Efficient business process consolidation: combining topic features with structure matching.
Soft Comput., 2018

Self-adaptive kernel K-means algorithm based on the shuffled frog leaping algorithm.
Soft Comput., 2018

Locally adaptive multiple kernel k-means algorithm based on shared nearest neighbors.
Soft Comput., 2018

An Evolutionary Computation Based Feature Selection Method for Intrusion Detection.
Security and Communication Networks, 2018

Self-adaptive bat algorithm for large scale cloud manufacturing service composition.
Peer-to-Peer Networking and Applications, 2018

Generative adversarial network based telecom fraud detection at the receiving bank.
Neural Networks, 2018

Text classification based on deep belief network and softmax regression.
Neural Computing and Applications, 2018

Memetic algorithm based on extension step and statistical filtering for large-scale capacitated arc routing problems.
Natural Computing, 2018

iUUCD 2.0: an update with rich annotations for ubiquitin and ubiquitin-like conjugations.
Nucleic Acids Research, 2018

Multipurpose watermarking for vector map protection and authentication.
Multimedia Tools Appl., 2018

A new validity index adapted to fuzzy clustering algorithm.
Multimedia Tools Appl., 2018

DPCG: an efficient density peaks clustering algorithm based on grid.
Int. J. Machine Learning & Cybernetics, 2018

Density peaks clustering using geodesic distances.
Int. J. Machine Learning & Cybernetics, 2018

A robust density peaks clustering algorithm using fuzzy neighborhood.
Int. J. Machine Learning & Cybernetics, 2018

Bat algorithm with triangle-flipping strategy for numerical optimization.
Int. J. Machine Learning & Cybernetics, 2018

An improved fingerprint orientation field extraction method based on quality grading scheme.
Int. J. Machine Learning & Cybernetics, 2018

Necessary conditions for exponential stability of linear neutral type systems with multiple time delays.
J. Franklin Institute, 2018

Predicting lysine-malonylation sites of proteins using sequence and predicted structural features.
Journal of Computational Chemistry, 2018

Knowledge based differential evolution for cloud computing service composition.
J. Ambient Intelligence and Humanized Computing, 2018

A semi-supervised approximate spectral clustering algorithm based on HMRF model.
Inf. Sci., 2018

An overview on Restricted Boltzmann Machines.
Neurocomputing, 2018

Multi-objective classification based on NSGA-II.
IJCSM, 2018

Improved artificial bee colony algorithm with differential evolution for the numerical optimisation problems.
IJCSE, 2018

An evolutionary classification method based on fireworks algorithm.
IJBIC, 2018

NSCT-PCNN image fusion based on image gradient motivation.
IET Computer Vision, 2018

Feature selection using forest optimization algorithm based on contribution degree.
Intell. Data Anal., 2018

A weighted collaboration network generalization method for privacy protection in C-DBLP.
Intell. Data Anal., 2018

Bioinformatics Commons: The Cornerstone of Life and Health Sciences.
Genomics, Proteomics & Bioinformatics, 2018

PTMD: A Database of Human Disease-associated Post-translational Modifications.
Genomics, Proteomics & Bioinformatics, 2018

DeepNitro: Prediction of Protein Nitration and Nitrosylation Sites by Deep Learning.
Genomics, Proteomics & Bioinformatics, 2018

A hybrid multi-objective firefly algorithm for big data optimization.
Appl. Soft Comput., 2018

Protection of location privacy for moving kNN queries in social networks.
Appl. Soft Comput., 2018

A Self-Adaptive Fireworks Algorithm for Classification Problems.
IEEE Access, 2018

An Improved Reciprocally Convex Inequality and Application to Stability Analysis of Time-Delay Systems Based on Delay Partition Approach.
IEEE Access, 2018

Defect Detection of Alumina Substrate with Adaptive Edge Detection Algorithm.
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018

2017
Research on Coverage Probability in Ultra-Dense 5G Heterogeneous Cellular Networks Based on Poisson Clustered Process.
Wireless Personal Communications, 2017

A Pythagorean-Type Fuzzy Deep Denoising Autoencoder for Industrial Accident Early Warning.
IEEE Trans. Fuzzy Systems, 2017

Deep Conditional Random Field Approach to Transmembrane Topology Prediction and Application to GPCR Three-Dimensional Structure Modeling.
IEEE/ACM Trans. Comput. Biology Bioinform., 2017

Cooperative particle swarm optimization using MapReduce.
Soft Comput., 2017

A hybrid artificial bee colony for optimizing a reverse logistics network system.
Soft Comput., 2017

Prior knowledge guided differential evolution.
Soft Comput., 2017

A novel density peaks clustering algorithm for mixed data.
Pattern Recognition Letters, 2017

Weighted linear loss multiple birth support vector machine based on information granulation for multi-class classification.
Pattern Recognition, 2017

A novel knowledge-guided evolutionary scheduling strategy for energy-efficient connected coverage optimization in WSNs.
Peer-to-Peer Networking and Applications, 2017

WERAM: a database of writers, erasers and readers of histone acetylation and methylation in eukaryotes.
Nucleic Acids Research, 2017

CGDB: a database of circadian genes in eukaryotes.
Nucleic Acids Research, 2017

Research on denoising sparse autoencoder.
Int. J. Machine Learning & Cybernetics, 2017

An entropy-based density peaks clustering algorithm for mixed type data employing fuzzy neighborhood.
Knowl.-Based Syst., 2017

Measures of uncertainty for neighborhood rough sets.
Knowl.-Based Syst., 2017

A novel oriented cuckoo search algorithm to improve DV-Hop performance for cyber-physical systems.
J. Parallel Distrib. Comput., 2017

Gene selection for tumor classification using neighborhood rough sets and entropy measures.
Journal of Biomedical Informatics, 2017

Fingerprint enhancement rooted in the spectra diffusion by the aid of the 2D adaptive Chebyshev band-pass filter with orientation-selective.
Inf. Sci., 2017

Combining weighted linear project analysis with orientation diffusion for fingerprint orientation field reconstruction.
Inf. Sci., 2017

An improved multiple birth support vector machine for pattern classification.
Neurocomputing, 2017

An evolutionary deep neural network for predicting morbidity of gastrointestinal infections by food contamination.
Neurocomputing, 2017

A cost-sensitive rotation forest algorithm for gene expression data classification.
Neurocomputing, 2017

A hybrid feature selection algorithm for gene expression data classification.
Neurocomputing, 2017

Mining intrinsic information by matrix factorization-based approaches for collaborative filtering in recommender systems.
Neurocomputing, 2017

Finite-time state observer for delayed reaction-diffusion genetic regulatory networks.
Neurocomputing, 2017

Wavelet twin support vector machines based on glowworm swarm optimization.
Neurocomputing, 2017

Distributed content filtering algorithm based on data label and policy expression in active distribution networks.
Neurocomputing, 2017

Combining Gabor filtering and classification dictionaries learning for fingerprint enhancement.
IET Biometrics, 2017

Fingerprint image super resolution using sparse representation with ridge pattern prior by classification coupled dictionaries.
IET Biometrics, 2017

Combining Wang-Landau sampling algorithm and heuristics for solving the unequal-area dynamic facility layout problem.
European Journal of Operational Research, 2017

A Review on Feature Binding Theory and Its Functions Observed in Perceptual Process.
Cognitive Computation, 2017

Cloud Model-Based Artificial Immune Network for Complex Optimization Problem.
Comp. Int. and Neurosc., 2017

A quasi-human strategy-based improved basin filling algorithm for the orthogonal rectangular packing problem with mass balance constraint.
Computers & Industrial Engineering, 2017

Computational prediction of methylation types of covalently modified lysine and arginine residues in proteins.
Briefings in Bioinformatics, 2017

Integrated civilian-military pre-positioning of emergency supplies: A multiobjective optimization approach.
Appl. Soft Comput., 2017

Research on Point-wise Gated Deep Networks.
Appl. Soft Comput., 2017

Partitioned-cooperative quantum-behaved particle swarm optimization based on multilevel thresholding applied to medical image segmentation.
Appl. Soft Comput., 2017

A classification method based on self-adaptive artificial bee colony.
Proceedings of the 2017 IEEE Symposium Series on Computational Intelligence, 2017

Dependence structure of Gabor wavelets for face recognition.
Proceedings of the 2017 IEEE Symposium Series on Computational Intelligence, 2017

Classifying Non-linear Gene Expression Data Using a Novel Hybrid Rotation Forest Method.
Proceedings of the Intelligent Computing Methodologies - 13th International Conference, 2017

An Improved Artificial Immune Network Based on the Secondary Immune Mechanism for Data Clustering.
Proceedings of the Cloud Computing and Security - Third International Conference, 2017

2016
Multi-objective layout optimization of a satellite module using the Wang-Landau sampling method with local search.
Frontiers of IT & EE, 2016

A novel 3D model retrieval system based on three-view sketches.
Journal of Intelligent and Fuzzy Systems, 2016

Less conservative robust absolute stability criteria for uncertain neutral-type Lur'e systems with time-varying delays.
J. Franklin Institute, 2016

Approximate normalized cuts without Eigen-decomposition.
Inf. Sci., 2016

Terminal neural computing: Finite-time convergence and its applications.
Neurocomputing, 2016

Performance analysis for clustering algorithms.
IJCSM, 2016

Improved bat algorithm with optimal forage strategy and random disturbance strategy.
IJBIC, 2016

Precision Medicine: What Challenges Are We Facing?
Genomics, Proteomics & Bioinformatics, 2016

Weight Uncertainty in Boltzmann Machine.
Cognitive Computation, 2016

A heuristic quasi-physical algorithm with coarse and fine adjustment for multi-objective weighted circles packing problem.
Computers & Industrial Engineering, 2016

Immune clonal algorithm based on directed evolution for multi-objective capacitated arc routing problem.
Appl. Soft Comput., 2016

Classification Based on Fireworks Algorithm.
Proceedings of the Bio-inspired Computing - Theories and Applications, 2016

Classification Based on Brain Storm Optimization Algorithm.
Proceedings of the Bio-inspired Computing - Theories and Applications, 2016

2015
Efficient Feature Selection and Classification for Vehicle Detection.
IEEE Trans. Circuits Syst. Video Techn., 2015

AnimalTFDB 2.0: a resource for expression, prediction and functional study of animal transcription factors.
Nucleic Acids Research, 2015

MiCroKiTS 4.0: a database of midbody, centrosome, kinetochore, telomere and spindle.
Nucleic Acids Research, 2015

A rapid learning algorithm for vehicle classification.
Inf. Sci., 2015

The performance research of artificial bee colony algorithm on the large scale global optimisation problems.
IJWMC, 2015

A Hybrid Evolutionary Algorithm for Numerical Optimization Problem.
Intelligent Automation & Soft Computing, 2015

IBS: an illustrator for the presentation and visualization of biological sequences.
Bioinformatics, 2015

dbPSP: a curated database for protein phosphorylation sites in prokaryotes.
Database, 2015

Discrete gbest-guided artificial bee colony algorithm for cloud service composition.
Appl. Intell., 2015

Controlling spiral waves and spatiotemporal chaos by dislocation coupling.
Proceedings of the 11th International Conference on Natural Computation, 2015

Security system construction of land and resources network based on intrusion detection.
Proceedings of the 8th International Conference on Biomedical Engineering and Informatics, 2015

2014
An efficient energy hole alleviating algorithm for wireless sensor networks.
IEEE Trans. Consumer Electronics, 2014

GPS-SUMO: a tool for the prediction of sumoylation sites and SUMO-interaction motifs.
Nucleic Acids Research, 2014

EKPD: a hierarchical database of eukaryotic protein kinases and protein phosphatases.
Nucleic Acids Research, 2014

CPLM: a database of protein lysine modifications.
Nucleic Acids Research, 2014

dbPPT: a comprehensive database of protein phosphorylation in plants.
Database, 2014

An ensemble algorithm with self-adaptive learning techniques for high-dimensional numerical optimization.
Applied Mathematics and Computation, 2014

Using TTCN-3 to Test SPDY Protocol Interaction Property.
Proceedings of the IEEE 38th Annual Computer Software and Applications Conference, 2014

2013
UUCD: a family-based database of ubiquitin and ubiquitin-like conjugation.
Nucleic Acids Research, 2013

Systematic analysis of the Plk-mediated phosphoregulation in eukaryotes.
Briefings in Bioinformatics, 2013

2012
CPSS: a computational platform for the analysis of small RNA deep sequencing data.
Bioinformatics, 2012

Study of Interaction Property Testing of Distributed System Based on Petri Net.
Proceedings of the Eighth IEEE World Congress on Services, 2012

Control of spiral waves and spatiotemporal chaos via synchronization in the double-layer stochastic coupling networks.
Proceedings of the Eighth International Conference on Natural Computation, 2012

2011
CPLA 1.0: an integrated database of protein lysine acetylation.
Nucleic Acids Research, 2011

Prediction of novel pre-microRNAs with high accuracy through boosting and SVM.
Bioinformatics, 2011

Study on the dynamics of indoor pedestrian evacuation based on the game.
Proceedings of the Seventh International Conference on Natural Computation, 2011

Study on the detention numbers of slow-to-star in the mixed traffic flow.
Proceedings of the Seventh International Conference on Natural Computation, 2011

2010
MiCroKit 3.0: an integrated database of midbody, centrosome and kinetochore.
Nucleic Acids Research, 2010

Study of the traffic flow on the various sloping way.
Proceedings of the Sixth International Conference on Natural Computation, 2010

Study on pedestrian traffic at the channel bottleneck.
Proceedings of the Sixth International Conference on Natural Computation, 2010

2009
Stochastic Driving and Coupling Control Method to Suppress Spiral Waves and Spatiotemporal Chaos and Analysis of Correlation.
I. J. Bifurcation and Chaos, 2009

MBA: a literature mining system for extracting biomedical abbreviations.
BMC Bioinformatics, 2009

2008
Lyapunov Spectra of Coupled Chaotic Maps.
I. J. Bifurcation and Chaos, 2008

A New Alignment Algorithm to Identify Definitions Corresponding to Abbreviations in Biomedical Text.
Proceedings of the International Workshop on Knowledge Discovery and Data Mining, 2008

Proteome-Wide Analysis of Amino Acid Absence in Composition and Plasticity.
Proceedings of the Advanced Intelligent Computing Theories and Applications. With Aspects of Theoretical and Methodological Issues, 2008

Study Effects of Maximum Velocity and Delay Probability on Mixed Traffic Flow.
Proceedings of the Fifth International Conference on Fuzzy Systems and Knowledge Discovery, 2008

2007
Kronecker Maps and Sylvester-Polynomial Matrix Equations.
IEEE Trans. Automat. Contr., 2007

2006
SUMOsp: a web server for sumoylation site prediction.
Nucleic Acids Research, 2006

MeMo: a web tool for prediction of protein methylation modifications.
Nucleic Acids Research, 2006

PPSP: prediction of PK-specific phosphorylation site with Bayesian decision theory.
BMC Bioinformatics, 2006

NBA-Palm: prediction of palmitoylation site implemented in Naïve Bayes algorithm.
BMC Bioinformatics, 2006

CSS-Palm: palmitoylation site prediction with a clustering and scoring strategy (CSS).
Bioinformatics, 2006

HSPPIP: An Online Tool for Prediction of Protein-Protein Interactions in Humans.
Proceedings of the Computational Intelligence and Bioinformatics, 2006

2005
GPS: a comprehensive www server for phosphorylation sites prediction.
Nucleic Acids Research, 2005


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