Zhi-Ping Liu
Orcid: 0000-0001-7742-9161
According to our database1,
Zhi-Ping Liu
authored at least 54 papers
between 2006 and 2024.
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Bibliography
2024
Network Activity Evaluation Reveals Significant Gene Regulatory Architectures During SARS-CoV-2 Viral Infection From Dynamic scRNA-seq Data.
IEEE J. Biomed. Health Informatics, April, 2024
2023
Biomarker discovery from high-throughput data by connected network-constrained support vector machine.
Expert Syst. Appl., September, 2023
ActivePPI: quantifying protein-protein interaction network activity with Markov random fields.
Bioinform., September, 2023
LogBTF: gene regulatory network inference using Boolean threshold network model from single-cell gene expression data.
Bioinform., May, 2023
MOFNet: A Deep Learning Framework of Integrating Multi-omics Data for Breast Cancer Diagnosis.
Proceedings of the Advanced Intelligent Computing Technology and Applications, 2023
Multi-objective Optimization-Based Approach for Detection of Breast Cancer Biomarkers.
Proceedings of the Advanced Intelligent Computing Technology and Applications, 2023
2022
Evaluating Gene Regulatory Network Activity From Dynamic Expression Data by Regularized Constraint Programming.
IEEE J. Biomed. Health Informatics, 2022
Discovering biomarkers of hepatocellular carcinoma from single-cell RNA sequencing data by cooperative games on gene regulatory network.
J. Comput. Sci., 2022
Automated machine learning for secure key rate in discrete-modulated continuous-variable quantum key distribution.
CoRR, 2022
Predicting multiple types of MicroRNA-disease associations based on tensor factorization and label propagation.
Comput. Biol. Medicine, 2022
Robust biomarker screening from gene expression data by stable machine learning-recursive feature elimination methods.
Comput. Biol. Chem., 2022
BMC Bioinform., 2022
PST-PRNA: prediction of RNA-binding sites using protein surface topography and deep learning.
Bioinform., 2022
Graph attention network for link prediction of gene regulations from single-cell RNA-sequencing data.
Bioinform., 2022
Appl. Intell., 2022
A Comparison Study of Predicting lncRNA-Protein Interactions via Representative Network Embedding Methods.
Proceedings of the Intelligent Computing Theories and Application, 2022
2021
Prioritizing Type 2 Diabetes Genes by Weighted PageRank on Bilayer Heterogeneous Networks.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021
Prediction of cardiovascular diseases by integrating multi-modal features with machine learning methods.
Biomed. Signal Process. Control., 2021
Inference of Gene Regulatory Network from Time Series Expression Data by Combining Local Geometric Similarity and Multivariate Regression.
Proceedings of the Intelligent Computing Theories and Application, 2021
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021
2020
Network-based prioritization of cancer genes by integrative ranks from multi-omics data.
Comput. Biol. Medicine, 2020
Proceedings of the ICBIP 2020: 5th International Conference on Biomedical Signal and Image Processing, 2020
2019
Identifying Cancer Biomarkers from High-Throughput RNA Sequencing Data by Machine Learning.
Proceedings of the Intelligent Computing Theories and Application, 2019
2018
Quant. Biol., 2018
J. Biomed. Informatics, 2018
2017
IET Image Process., 2017
Structure alignment-based classification of RNA-binding pockets reveals regional RNA recognition motifs on protein surfaces.
BMC Bioinform., 2017
2016
Neurocomputing, 2016
CMIP: a software package capable of reconstructing genome-wide regulatory networks using gene expression data.
BMC Bioinform., 2016
2015
Identifying overlapping communities in social networks using multi-scale local information expansion.
CoRR, 2015
Identifying module biomarker in type 2 diabetes mellitus by discriminative area of functional activity.
BMC Bioinform., 2015
RegNetwork: an integrated database of transcriptional and post-transcriptional regulatory networks in human and mouse.
Database J. Biol. Databases Curation, 2015
2014
Systematic identification of transcriptional and post-transcriptional regulations in human respiratory epithelial cells during influenza A virus infection.
BMC Bioinform., 2014
2013
Research and applications: An integrated approach to identify causal network modules of complex diseases with application to colorectal cancer.
J. Am. Medical Informatics Assoc., 2013
NARROMI: a noise and redundancy reduction technique improves accuracy of gene regulatory network inference.
Bioinform., 2013
2012
J. Am. Medical Informatics Assoc., 2012
Multiple-resource and multiple-depot emergency response problem considering secondary disasters.
Expert Syst. Appl., 2012
A computational procedure for identifying master regulator candidates: a case study on diabetes progression in Goto-Kakizaki rats.
BMC Syst. Biol., 2012
Inferring a protein interaction map of Mycobacterium tuberculosis based on sequences and interologs.
BMC Bioinform., 2012
BMC Bioinform., 2012
Inferring gene regulatory networks from gene expression data by path consistency algorithm based on conditional mutual information.
Bioinform., 2012
Proceedings of the 6th IEEE International Conference on Systems Biology, 2012
A Gaussian graphical model for identifying significantly responsive regulatory networks from time series gene expression data.
Proceedings of the 6th IEEE International Conference on Systems Biology, 2012
2011
Network screening of Goto-Kakizaki rat liver microarray data during diabetic progression.
BMC Syst. Biol., 2011
Inferring Protein-Protein Interactions Based on Sequences and Interologs in Mycobacterium Tuberculosis.
Proceedings of the Bio-Inspired Computing and Applications, 2011
2010
Identifying dysfunctional crosstalk of pathways in various regions of Alzheimer's disease brains.
BMC Syst. Biol., 2010
Prediction of protein-RNA binding sites by a random forest method with combined features.
Bioinform., 2010
Inferring gene regulatory networks from expression data with prior knowledge by linear programming.
Proceedings of the International Conference on Machine Learning and Cybernetics, 2010
2009
Dynamically dysfunctional protein interactions in the development of Alzheimer's disease.
Proceedings of the IEEE International Conference on Systems, 2009
2008
Int. J. Bioinform. Res. Appl., 2008
2007
BMC Bioinform., 2007
2006
Proceedings of the First International Conference on Innovative Computing, Information and Control (ICICIC 2006), 30 August, 2006