Andrey A. Mironov

According to our database1, Andrey A. Mironov authored at least 31 papers between 1990 and 2023.

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Bibliography

2023
Foreign RNA spike-ins enable accurate allele-specific expression analysis at scale.
Bioinform., 2023

RNA-Chrom: a manually curated analytical database of RNA-chromatin interactome.
Database J. Biol. Databases Curation, 2023

2021
An extended catalogue of tandem alternative splice sites in human tissue transcriptomes.
PLoS Comput. Biol., 2021

2018
Coloc-stats: a unified web interface to perform colocalization analysis of genomic features.
Nucleic Acids Res., 2018

2017
StereoGene: rapid estimation of genome-wide correlation of continuous or interval feature data.
Bioinform., 2017

2014
RNASurface: fast and accurate detection of locally optimal potentially structured RNA segments.
Bioinform., 2014

2013
Fast assessment of the correlation between coverage-like genomic features and its statistical significance.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013

2012
Exploring Massive, Genome Scale Datasets with the GenometriCorr Package.
PLoS Comput. Biol., 2012

Evidence for Widespread Association of Mammalian Splicing and Conserved Long-Range RNA Structures.
Proceedings of the Research in Computational Molecular Biology, 2012

Automated Regulon Content Prediction and Estimation of PWM Quality.
Proceedings of the BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Vilamoura, Algarve, Portugal, 1, 2012

A Generalized Hidden Markov Model for Prediction of Cis-regulatory Modules in Eukaryote Genomes and Description of Their Internal Structure.
Proceedings of the BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Vilamoura, Algarve, Portugal, 1, 2012

2010
RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach.
Nucleic Acids Res., 2010

An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies.
Algorithms Mol. Biol., 2010

2009
Evolution of Regulatory Systems in Bacteria (Invited Keynote Talk).
Proceedings of the Bioinformatics Research and Applications, 5th International Symposium, 2009

2007
RegTransBase - a database of regulatory sequences and interactions in a wide range of prokaryotic genomes.
Nucleic Acids Res., 2007

2006
An Overview of the Algorithmic Session of MCCMB'05.
J. Bioinform. Comput. Biol., 2006

Rnakinetics: a Web Server that Models Secondary Structure Kinetics of an Elongating RNA.
J. Bioinform. Comput. Biol., 2006

2005
Alternative splicing and protein function.
BMC Bioinform., 2005

A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length.
Bioinform., 2005

2004
SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteins.
Nucleic Acids Res., 2004

2003
Two genetic algorithms for identification of regulatory signals.
Silico Biol., 2003

2002
Exact mapping of prokaryotic gene starts.
Briefings Bioinform., 2002

2001
Gene recognition in eukaryotic DNA by comparison of genomic sequences.
Bioinform., 2001

Pro-Frame: similarity-based gene recognition in eukaryotic DNA sequences with errors.
Bioinform., 2001

2000
Comparative Analysis of Regulatory Patterns in Bacterial Genomes.
Briefings Bioinform., 2000

1998
Algorithms and software for support of gene identification experiments.
Bioinform., 1998

SST versus EST in Gene Recognition (Invited Paper).
Proceedings of the String Processing and Information Retrieval: A South American Symposium, 1998

Combining diverse evidence for gene recognition in completely sequenced bacterial genomes.
Proceedings of the German Conference on Bioinformatics, 1998

1996
Spliced Alignment: A New Approach to Gene Recognition.
Proceedings of the Combinatorial Pattern Matching, 7th Annual Symposium, 1996

1995
DNASUN: a package of computer programs for the biotechnology laboratory.
Comput. Appl. Biosci., 1995

1990
Mapping DNA by stochastic relaxation: a new approach to fragment sizes.
Comput. Appl. Biosci., 1990


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