Astrid Lægreid

According to our database, Astrid Lægreid authored at least 25 papers between 2000 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2021

The Gene Ontology resource: enriching a GOld mine.

Seth Carbon, Eric Douglass, Benjamin M. Good, Deepak R. Unni, Nomi L. Harris, Christopher J. Mungall, Siddartha Basu, Rex L. Chisholm, Robert J. Dodson, Eric Hartline, Petra Fey, Paul D. Thomas, Laurent-Philippe Albou, Dustin Ebert, Michael J. Kesling, Huaiyu Mi, Anushya Muruganujan, Xiaosong Huang, Tremayne Mushayahama, Sandra A. LaBonte, Deborah A. Siegele, Giulia Antonazzo, Helen Attrill, Nick H. Brown, Phani V. Garapati, Steven J. Marygold, Vitor Trovisco, Gilberto dos Santos, Kathleen Falls, Christopher J. Tabone, Pinglei Zhou, Joshua L. Goodman, Victor B. Strelets, Jim Thurmond, Penelope Garmiri, Rizwan Ishtiaq, Milagros Rodríguez-López, Marcio Luis Acencio, Martin Kuiper, Astrid Lægreid, Colin Logie, Ruth C. Lovering, Barbara Kramarz, Shirin C. C. Saverimuttu, Sandra M. Pinheiro, Heather Gunn, Renzhi Su, Katherine E. Thurlow, Marcus C. Chibucos, Michelle G. Giglio, Suvarna Nadendla, James B. Munro, Rebecca C. Jackson, Margaret J. Duesbury, Noemi del-Toro, Birgit H. M. Meldal, Kalpana Paneerselvam, Livia Perfetto, Pablo Porras, Sandra E. Orchard, Anjali Shrivastava, Hsin-Yu Chang, Robert D. Finn, Alex L. Mitchell, Neil D. Rawlings, Lorna J. Richardson, Amaia Sangrador-Vegas, Judith A. Blake, Karen R. Christie, Mary E. Dolan, Harold J. Drabkin, David P. Hill, Li Ni, Dmitry M. Sitnikov, Midori A. Harris, Stephen G. Oliver, Kim Rutherford, Valerie Wood, Jaqueline Hayles, Jürg Bähler, Elizabeth R. Bolton, Jeffrey DePons, Melinda R. Dwinell, G. Thomas Hayman, Mary L. Kaldunski, Anne E. Kwitek, Stanley J. F. Laulederkind, Cody Plasterer, Marek Tutaj, Mahima Vedi, Shur-Jen Wang, Peter D'Eustachio, Lisa Matthews, James P. Balhoff, Suzi A. Aleksander, Michael J. Alexander, J. Michael Cherry, Stacia R. Engel, Felix Gondwe, Kalpana Karra, Stuart R. Miyasato, Robert S. Nash, Matt Simison, Marek S. Skrzypek, Shuai Weng, Edith D. Wong, Marc Feuermann, Pascale Gaudet, Anne Morgat, Erica Bakker, Tanya Z. Berardini, Leonore Reiser, Shabari Subramaniam, Eva Huala, Cecilia N. Arighi, Andrea H. Auchincloss, Kristian B. Axelsen, Ghislaine Argoud-Puy, Alex Bateman, Marie-Claude Blatter, Emmanuel Boutet, Emily Bowler, Lionel Breuza, Alan J. Bridge, Ramona Britto, Hema Bye-A-Jee, Cristina Casals-Casas, Elisabeth Coudert, Paul Denny, Anne Estreicher, Maria Livia Famiglietti, George E. Georghiou, Arnaud Gos, Nadine Gruaz-Gumowski, Emma Hatton-Ellis, Chantal Hulo, Alexandr Ignatchenko, Florence Jungo, Kati Laiho, Philippe Le Mercier, Damien Lieberherr, Antonia Lock, Yvonne Lussi, Alistair MacDougall, Michele Magrane, Maria Jesus Martin, Patrick Masson, Darren A. Natale, Nevila Hyka-Nouspikel, Ivo Pedruzzi, Lucille Pourcel, Sylvain Poux, Sangya Pundir, Catherine Rivoire, Elena Speretta, Shyamala Sundaram, Nidhi Tyagi, Kate Warner, Rossana Zaru, Cathy H. Wu, Alexander D. Diehl, Juancarlos Chan, Christian A. Grove, Raymond Y. N. Lee, Hans-Michael Müller, Daniela Raciti, Kimberly Van Auken, Paul W. Sternberg, Matthew Berriman, Michael Paulini, Kevin L. Howe, Sibyl Gao, Adam Wright, Lincoln Stein, Douglas G. Howe, Sabrina Toro, Monte Westerfield, Pankaj Jaiswal, Laurel Cooper, Justin Elser

Nucleic Acids Res., 2021

The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST).

Vasundra Touré, Steven Vercruysse, Marcio Luis Acencio, Ruth C. Lovering, Sandra E. Orchard, Glyn Bradley, Cristina Casals-Casas, Claudine Chaouiya, Noemi del-Toro, Åsmund Flobak, Pascale Gaudet, Henning Hermjakob, Charles Tapley Hoyt, Luana Licata, Astrid Lægreid, Christopher J. Mungall, Anne Niknejad, Simona Panni, Livia Perfetto, Pablo Porras, Dexter Pratt, Julio Saez-Rodriguez, Denis Thieffry, Paul D. Thomas, Dénes Türei, Martin Kuiper

Bioinform., 2021

2019

CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination.

Livia Perfetto, Marcio Luis Acencio, Glyn Bradley, Gianni Cesareni, Noemi del-Toro, Dávid Fazekas, Henning Hermjakob, Tamás Korcsmáros, Martin Kuiper, Astrid Lægreid, Prisca Lo Surdo, Ruth C. Lovering, Sandra E. Orchard, Pablo Porras, Paul D. Thomas, Vasundra Touré, John Zobolas, Luana Licata

Bioinform., 2019

An Example of Multimodal Biological Knowledge Representation.

José Antonio Vera-Ramos, Belén Juanes-Cortés, Jesualdo Tomás Fernández-Breis, Pascale Gaudet, Martin Kuiper, Astrid Lægreid, Colin Logie, María del Mar Roldán García, Stefan Schulz

Proceedings of the Joint Ontology Workshops 2019 Episode V: The Styrian Autumn of Ontology, 2019

2017

CImbinator: a web-based tool for drug synergy analysis in small- and large-scale datasets.

Åsmund Flobak, Miguel Vazquez, Astrid Lægreid, Alfonso Valencia

Bioinform., 2017

2016

Gene regulation knowledge commons: community action takes care of DNA binding transcription factors.

Sushil Tripathi, Steven Vercruysse, Konika Chawla, Karen R. Christie, Judith A. Blake, Rachael P. Huntley, Sandra E. Orchard, Henning Hermjakob, Liv Thommesen, Astrid Lægreid, Martin Kuiper

Database J. Biol. Databases Curation, 2016

2015

Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling.

Åsmund Flobak, Anaïs Baudot, Elisabeth Remy, Liv Thommesen, Denis Thieffry, Martin Kuiper, Astrid Lægreid

PLoS Comput. Biol., 2015

The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms.

Sushil Tripathi, Åsmund Flobak, Konika Chawla, Anaïs Baudot, Torunn Bruland, Liv Thommesen, Martin Kuiper, Astrid Lægreid

BMC Syst. Biol., 2015

2014

The MIntAct project - IntAct as a common curation platform for 11 molecular interaction databases.

Sandra E. Orchard, Mais G. Ammari, Bruno Aranda, Lionel Breuza, Leonardo Briganti, Fiona Broackes-Carter, Nancy H. Campbell, Gayatri Chavali, Carol Chen, Noemi del-Toro, Margaret J. Duesbury, Marine Dumousseau, Eugenia Galeota, Ursula Hinz, Marta Iannuccelli, Sruthi Jagannathan, Rafael C. Jiménez, Jyoti Khadake, Astrid Lægreid, Luana Licata, Ruth C. Lovering, Birgit Meldal, Anna N. Melidoni, Mila Milagros, Daniele Peluso, Livia Perfetto, Pablo Porras, Arathi Raghunath, Sylvie Ricard-Blum, Bernd Roechert, Andre Stutz, Michael Tognolli, Kim Van Roey, Gianni Cesareni, Henning Hermjakob

Nucleic Acids Res., 2014

Finding gene regulatory network candidates using the gene expression knowledge base.

Aravind Venkatesan, Sushil Tripathi, Alejandro Sanz de Galdeano, Ward Blondé, Astrid Lægreid, Vladimir Mironov, Martin Kuiper

BMC Bioinform., 2014

2013

TFcheckpoint: a curated compendium of specific DNA-binding RNA polymerase II transcription factors.

Konika Chawla, Sushil Tripathi, Liv Thommesen, Astrid Lægreid, Martin Kuiper

Bioinform., 2013

Gene Ontology annotation of sequence-specific DNA binding transcription factors: setting the stage for a large-scale curation effort.

Sushil Tripathi, Karen R. Christie, Rama Balakrishnan, Rachael P. Huntley, David P. Hill, Liv Thommesen, Judith A. Blake, Martin Kuiper, Astrid Lægreid

Database J. Biol. Databases Curation, 2013

2006

<i>GeneTools </i>- application for functional annotation and statistical hypothesis testing.

Vidar Beisvag, Frode K. R. Jünge, Hallgeir Bergum, Lars Jølsum, Stian Lydersen, Clara-Cecilie Günther, Heri Ramampiaro, Mette Langaas, Arne K. Sandvik, Astrid Lægreid

BMC Bioinform., 2006

Additional Gene Ontology structure for improved biological reasoning.

Simen Myhre, Henrik Tveit, Torulf Mollestad, Astrid Lægreid

Bioinform., 2006

2005

gProt: Annotating Protein Interactions Using Google and Gene Ontology.

Rune Sætre, Amund Tveit, Martin Thorsen Ranang, Tonje Strommen Steigedal, Liv Thommesen, Kamilla Stunes, Astrid Lægreid

Proceedings of the Knowledge-Based Intelligent Information and Engineering Systems, 2005

ProtChew: Automatic Extraction of Protein Names from Biomedical Literature.

Amund Tveit, Rune Sætre, Astrid Lægreid, Tonje Strommen Steigedal

Proceedings of the 21st International Conference on Data Engineering Workshops, 2005

Semantic Annotation of Biomedical Literature Using Google.

Rune Sætre, Amund Tveit, Tonje Strommen Steigedal, Astrid Lægreid

Proceedings of the Computational Science and Its Applications, 2005

Knowledge Intensive Case Based Support for Automated Explanation of Biological Phenomena.

Waclaw Kusnierczyk, Agnar Aamodt, Astrid Lægreid

Proceedings of the 6th International Conference on Case-Based Reasoning, 2005

2004

XHM: A system for detection of potential cross hybridizations in DNA microarrays.

Kristian Flikka, Fekadu Yadetie, Astrid Lægreid, Inge Jonassen

BMC Bioinform., 2004

The Alignment of the Medical Subject Headings to the Gene Ontology and Its Application in Gene Annotation.

Henrik Tveit, Torulf Mollestad, Astrid Lægreid

Proceedings of the Rough Sets and Current Trends in Computing, 2004

2003

Learning Rule-based Models of Biological Process from Gene Expression Time Profiles Using Gene Ontology.

Torgeir R. Hvidsten, Astrid Lægreid, Henryk Jan Komorowski

Bioinform., 2003

2002

Learning Rough Set Classifiers from Gene Expressions and Clinical Data.

Herman Midelfart, Henryk Jan Komorowski, Kristin Nørsett, Fekadu Yadetie, Arne K. Sandvik, Astrid Lægreid

Fundam. Informaticae, 2002

2001

Predicting Gene Function from Gene Expressions and Ontologies.

Torgeir R. Hvidsten, Henryk Jan Komorowski, Arne K. Sandvik, Astrid Lægreid

Proceedings of the 6th Pacific Symposium on Biocomputing, 2001

Classification of Gene Expression Data in an Ontology.

Herman Midelfart, Astrid Lægreid, Henryk Jan Komorowski

Proceedings of the Medical Data Analysis, Second International Symposium, 2001

2000

Towards Knowledge Discovery from cDNA Microarray Gene Expression Data.

Henryk Jan Komorowski, Torgeir R. Hvidsten, Tor-Kristian Jenssen, Dyre Tjeldvoll, Eivind Hovig, Arne K. Sandvik, Astrid Lægreid

Proceedings of the Principles of Data Mining and Knowledge Discovery, 2000