Clemens Kreutz

According to our database1, Clemens Kreutz authored at least 17 papers between 2003 and 2019.

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Bibliography

2019
Guidelines for benchmarking of optimization approaches for fitting mathematical models.
CoRR, 2019

Benchmark problems for dynamic modeling of intracellular processes.
Bioinformatics, 2019

2018
An easy and efficient approach for testing identifiability.
Bioinformatics, 2018

2016
Identification of Cell Type-Specific Differences in Erythropoietin Receptor Signaling in Primary Erythroid and Lung Cancer Cells.
PLoS Computational Biology, 2016

L1 regularization facilitates detection of cell type-specific parameters in dynamical systems.
Bioinformatics, 2016

Fast integration-based prediction bands for ordinary differential equation models.
Bioinformatics, 2016

2015
Summary of the DREAM8 Parameter Estimation Challenge: Toward Parameter Identification for Whole-Cell Models.
PLoS Computational Biology, 2015

Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems.
Bioinformatics, 2015

2014
Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach.
BMC Systems Biology, 2014

2012
Likelihood based observability analysis and confidence intervals for predictions of dynamic models.
BMC Systems Biology, 2012

Comprehensive estimation of input signals and dynamics in biochemical reaction networks.
Bioinformatics, 2012

TSSi - an R package for transcription start site identification from 5′ mRNA tag data.
Bioinformatics, 2012

2009
Estimation of Gene Induction Enables a Relevance-Based Ranking of Gene Sets.
Journal of Computational Biology, 2009

Structural and practical identifiability analysis of partially observed dynamical models by exploiting the profile likelihood.
Bioinformatics, 2009

2007
An error model for protein quantification.
Bioinformatics, 2007

Data-based identifiability analysis of non-linear dynamical models.
Bioinformatics, 2007

2003
Controlling the Continuos Positive Airway Pressure-Device Using Partial Observable Markov Decision Processes.
Proceedings of the Modeling, 2003


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