Soohyun Lee

According to our database, Soohyun Lee authored at least 20 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Extracting Human Attention through Crowdsourced Patch Labeling.

Minsuk Chang, Seokhyeon Park, Hyeon Jeon, Aeri Cho, Soohyun Lee, Jinwook Seo

CoRR, 2024

2023

ZADU: A Python Library for Evaluating the Reliability of Dimensionality Reduction Embeddings.

Hyeon Jeon, Aeri Cho, Jinhwa Jang, Soohyun Lee, Jake Hyun, Hyung-Kwon Ko, Jaemin Jo, Jinwook Seo

Proceedings of the 2023 IEEE Visualization and Visual Analytics (VIS), 2023

Two-Stage Segmentation and Ensemble Modeling: Kidney Tumor Analysis in CT Images.

Soohyun Lee, Hyeyeon Won, Yeeun Lee

Proceedings of the Kidney and Kidney Tumor Segmentation - MICCAI 2023 Challenge, 2023

2022

Case Study: Improving the Quality of Dairy Cow Reconstruction with a Deep Learning-Based Framework.

Changgwon Dang, Taejeong Choi, Seungsoo Lee, Soohyun Lee, Mahboob Alam, Sangmin Lee, Seungkyu Han, Duy-Tang Hoang, Jaegu Lee, Duc Toan Nguyen

Sensors, 2022

Distortion-Aware Brushing for Interactive Cluster Analysis in Multidimensional Projections.

Hyeon Jeon, Michaël J. Aupetit, Soohyun Lee, Hyung-Kwon Ko, Youngtaek Kim, Jinwook Seo

CoRR, 2022

Pairs and Pairix: a file format and a tool for efficient storage and retrieval for Hi-C read pairs.

Soohyun Lee, Clara R. Bakker, Carl Vitzthum, Burak Han Alver, Peter J. Park

Bioinform., 2022

Uniform Manifold Approximation with Two-phase Optimization.

Hyeon Jeon, Hyung-Kwon Ko, Soohyun Lee, Jaemin Jo, Jinwook Seo

Proceedings of the 2022 IEEE Visualization and Visual Analytics (VIS), 2022

VANT: A Visual Analytics System for Refining Parallel Corpora in Neural Machine Translation.

Sebeom Park, Soohyun Lee, Youngtaek Kim, Hyeon Jeon, Seokweon Jung, Jinwook Bok, Jinwook Seo

Proceedings of the 15th IEEE Pacific Visualization Symposium, 2022

2021

Sustainable data analysis with Snakemake.

Felix Mölder, Kim Philipp Jablonski, Brice Letcher, Michael B. Hall, Christopher Tomkins-Tinch, Vanessa V. Sochat, Jan Forster, Soohyun Lee, Sven Twardziok, Alexander Kanitz, Andreas Wilm, Manuel Holtgrewe, Sven Rahmann, Sven Nahnsen, Johannes Köster

F1000Research, 2021

BamSnap: a lightweight viewer for sequencing reads in BAM files.

Minseok Kwon, Soohyun Lee, Michele Berselli, Chong Chu, Peter J. Park

Bioinform., 2021

HiTea: a computational pipeline to identify non-reference transposable element insertions in Hi-C data.

Dhawal Jain, Chong Chu, Burak Han Alver, Soohyun Lee, Eunjung Alice Lee, Peter J. Park

Bioinform., 2021

2019

Tibanna: software for scalable execution of portable pipelines on the cloud.

Soohyun Lee, Jeremy Johnson, Carl Vitzthum, Koray Kirli, Burak Han Alver, Peter J. Park

Bioinform., 2019

2015

EMSAR: estimation of transcript abundance from RNA-seq data by mappability-based segmentation and reclustering.

Soohyun Lee, Chae Hwa Seo, Burak Han Alver, Sanghyuk Lee, Peter J. Park

BMC Bioinform., 2015

An optical reconstruction of hologram recorded by OSH using amplitude-only SLM and phase-only SLM.

Joongki Park, Soohyun Lee, Min Sung Yoon, Jaehan Kim, Hyon-Gon Choo, Jinwoong Kim, Taegeun Kim

Proceedings of the 2015 3DTV-Conference: The True Vision, 2015

2014

Comparative analysis of metazoan chromatin organization Open.

Joshua Wing Kei Ho, Youngsook L. Jung, Tao Liu, Burak Han Alver, Soohyun Lee, Kohta Ikegami, Kyung-Ah Sohn, Aki Minoda, Michael Y. Tolstorukov, Alex Appert, Stephen C. J. Parker, Tingting Gu, Anshul Kundaje, Nicole C. Riddle, Eric Bishop, Thea A. Egelhofer, Sheng'en Shawn Hu, Artyom A. Alekseyenko, Andreas Rechtsteiner, Dalal Asker, Jason A. Belsky, Sarah K. Bowman, Q. Brent Chen, Ron A.-J. Chen, Daniel S. Day, Yan Dong, Andrea C. Dose, Xikun Duan, Charles B. Epstein, Sevinc Ercan, Elise A. Feingold, Francesco Ferrari, Jacob M. Garrigues, Nils Gehlenborg, Peter J. Good, Psalm Haseley, Daniel He, Moritz Herrmann, Michael M. Hoffman, Tess E. Jeffers, Peter V. Kharchenko, Paulina Kolasinska-Zwierz, Chitra V. Kotwaliwale, Nischay Kumar, Sasha A. Langley, Erica Larschan, Isabel Latorre, Maxwell W. Libbrecht, Xueqiu Lin, Richard Park, Michael J. Pazin, Hoang N. Pham, Annette Plachetka, Bo Qin, Yuri B. Schwartz, Noam Shoresh, Przemyslaw Stempor, Anne Vielle, Chengyang Wang, Christina M. Whittle, Huiling Xue, Robert E. Kingston, Ju Han Kim, Bradley E. Bernstein, Abby F. Dernburg, Vincenzo Pirrotta, Mitzi I. Kuroda, William S. Noble, Thomas D. Tullius, Manolis Kellis, David M. MacAlpine, Susan Strome, Sarah C. R. Elgin, Xiaole Shirley Liu, Jason D. Lieb, Julie Ahringer, Gary H. Karpen, Peter J. Park

Nat., 2014

2012

A new hierarchical packet classification algorithm.

Hyesook Lim, Soohyun Lee, Earl E. Swartzlander Jr.

Comput. Networks, 2012

2011

Accurate quantification of transcriptome from RNA-Seq data by effective length normalization.

Soohyun Lee, Chae Hwa Seo, Byungho Lim, Jin Ok Yang, Jeongsu Oh, Minjin Kim, Sooncheol Lee, Byungwook Lee, Changwon Kang, Sanghyuk Lee

Nucleic Acids Res., 2011

Keyword Search in Workflow Repositories with Access Control.

Susan B. Davidson, Soohyun Lee, Julia Stoyanovich

Proceedings of the 5th Alberto Mendelzon International Workshop on Foundations of Data Management, 2011

2007

Towards pathogenomics: a web-based resource for pathogenicity islands.

Sung Ho Yoon, Young-Kyu Park, Soohyun Lee, Doil Choi, Tae Kwang Oh, Cheol-Goo Hur, Jihyun F. Kim

Nucleic Acids Res., 2007

2004

CHOISS for selection of single nucleotide polymorphism markers on interval regularity.

Soohyun Lee, Changwon Kang

Bioinform., 2004