Isabel Rojas

According to our database, Isabel Rojas authored at least 26 papers between 1995 and 2012.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2012

SABIO-RK - database for biochemical reaction kinetics.

Ulrike Wittig, Renate Kania, Martin Golebiewski, Maja Rey, Lei Shi, Lenneke Jong, Enkhjargal Algaa, Andreas Weidemann, Heidrun Sauer-Danzwith, Saqib Mir, Olga Krebs, Meik Bittkowski, Elina Wetsch, Isabel Rojas, Wolfgang Müller

Nucleic Acids Res., 2012

2011

A-R-E: The Author-Review-Execute Environment.

Wolfgang Müller, Isabel Rojas, Andreas Eberhart, Peter Haase, Michael Schmidt

Proceedings of the International Conference on Computational Science, 2011

2010

Herausforderungen bei der Extraktion von biochemischen Daten aus der Literatur.

Ulrike Wittig, Renate Kania, Isabel Rojas, Wolfgang Müller

Proceedings of the 40. Jahrestagung der Gesellschaft für Informatik, Service Science - Neue Perspektiven für die Informatik, INFORMATIK 2010, Leipzig, Germany, September 27, 2010

An Unsupervised Approach for Acquiring Ontologies and RDF Data from Online Life Science Databases.

Saqib Mir, Steffen Staab, Isabel Rojas

Proceedings of the Semantic Web: Research and Applications, 2010

2009

Flache und semantische Verarbeitung von Namen biochemischer Verbindungen.

Henriette Engelken, Martin Golebiewski, Meik Bittkowski, Fritz Hamm, Jasmin Saric, Ulrike Wittig, Wolfgang Müller, Uwe Reyle, Isabel Rojas

Proceedings of the 39. Jahrestagung der Gesellschaft für Informatik, Im Focus das Leben, INFORMATIK 2009, Lübeck, Germany, September 28, 2009

Site-Wide Wrapper Induction for Life Science Deep Web Databases.

Saqib Mir, Steffen Staab, Isabel Rojas

Proceedings of the Data Integration in the Life Sciences, 6th International Workshop, 2009

Web-Prospector - An Automatic, Site-Wide Wrapper Induction Approach for Scientific Deep-Web Databases.

Saqib Mir, Steffen Staab, Isabel Rojas

Proceedings of the Datenbanksysteme in Business, 2009

2008

Unsupervised Learning of Semantic Relations for Molecular Biology Ontologies.

Massimiliano Ciaramita, Aldo Gangemi, Esther Ratsch, Jasmin Saric, Isabel Rojas

Proceedings of the Ontology Learning and Population: Bridging the Gap between Text and Knowledge, 2008

SYCAMORE - a systems biology computational analysis and modeling research environment.

Andreas Weidemann, Stefan Richter, Matthias Stein, Sven Sahle, Ralph Gauges, Razif R. Gabdoulline, Irina Surovtsova, Nils Semmelrock, Bruno Besson, Isabel Rojas, Rebecca C. Wade, Ursula Kummer

Bioinform., 2008

2007

SABIO-RK: A data warehouse for biochemical reactions and their kinetics.

Olga Krebs, Martin Golebiewski, Renate Kania, Saqib Mir, Jasmin Saric, Andreas Weidemann, Ulrike Wittig, Isabel Rojas

J. Integr. Bioinform., 2007

Workshop on "Storage and Annotation of Reaction Kinetics Data", Villa Bosch in Heidelberg, May 21-23, 2007.

Isabel Rojas, Ulrike Wittig

Silico Biol., 2007

Storing and Annotating of Kinetic Data.

Isabel Rojas, Martin Golebiewski, Renate Kania, Olga Krebs, Saqib Mir, Andreas Weidemann, Ulrike Wittig

Silico Biol., 2007

SABIO-RK: a database for biochemical reactions and their kinetics.

Isabel Rojas, Martin Golebiewski, Renate Kania, Olga Krebs, Saqib Mir, Andreas Weidemann, Ulrike Wittig

BMC Syst. Biol., 2007

Integration of SABIO-RK in workbenches for kinetic model design.

Martin Golebiewski, Saqib Mir, Renate Kania, Olga Krebs, Andreas Weidemann, Ulrike Wittig, Isabel Rojas

BMC Syst. Biol., 2007

2006

Extraction of regulatory gene/protein networks from Medline.

Jasmin Saric, Lars Juhl Jensen, Rossitza Ouzounova, Isabel Rojas, Peer Bork

Bioinform., 2006

SABIO-RK: Integration and Curation of Reaction Kinetics Data.

Ulrike Wittig, Martin Golebiewski, Renate Kania, Olga Krebs, Saqib Mir, Andreas Weidemann, Stefanie Anstein, Jasmin Saric, Isabel Rojas

Proceedings of the Data Integration in the Life Sciences, Third International Workshop, 2006

2005

Unsupervised Learning of Semantic Relations between Concepts of a Molecular Biology Ontology.

Massimiliano Ciaramita, Aldo Gangemi, Esther Ratsch, Jasmin Saric, Isabel Rojas

Proceedings of the IJCAI-05, Proceedings of the Nineteenth International Joint Conference on Artificial Intelligence, Edinburgh, Scotland, UK, July 30, 2005

2004

Web-based visualisation of the transcriptional control network of Escherichia coli.

Nestor Sosa, Andreas Kremling, Esther Ratsch, Isabel Rojas

Silico Biol., 2004

Large-scale extraction of gene regulation for model organisms in an ontological context.

Jasmin Saric, Lars Juhl Jensen, Isabel Rojas

Silico Biol., 2004

Extracting Regulatory Gene Expression Networks From Pubmed.

Jasmin Saric, Lars Juhl Jensen, Peer Bork, Rossitza Ouzounova, Isabel Rojas

Proceedings of the 42nd Annual Meeting of the Association for Computational Linguistics, 2004

2003

Notes on the use of ontologies in the biochemical domain.

Isabel Rojas, Esther Ratsch, Jasmin Saric, Ulrike Wittig

Silico Biol., 2003

Web-based exchange of biochemical information.

Sinan Güler, Andreas Eberhart, Isabel Rojas

Bioinform., 2003

2002

A database system for the analysis of biochemical pathways.

Isabel Rojas, Luca Bernardi, Esther Ratsch, Renate Kania, Ulrike Wittig, Jasmin Saric

Silico Biol., 2002

2001

A graph layout algorithm for drawing metabolic pathways

Moritz Y. Becker, Isabel Rojas

Bioinform., 2001

Meeting the spirit of history.

Ursula Kretschmer, Volker Coors, Ulrike Spierling, Dieter Grasbon, Kerstin Schneider, Isabel Rojas, Rainer Malaka

Proceedings of the 2001 Conference on Virtual Reality, 2001

1995

Compositional Construction of SWN models.

Isabel Rojas

Comput. J., 1995