Martin Golebiewski

According to our database, Martin Golebiewski authored at least 35 papers between 2006 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022.

Matthias König, Padraig Gleeson, Martin Golebiewski, Thomas E. Gorochowski, Michael Hucka, Sarah M. Keating, Chris J. Myers, David P. Nickerson, Björn Sommer, Dagmar Waltemath, Falk Schreiber

J. Integr. Bioinform., March, 2023

A Semantic Representation of the NFDI4Health Metadata Schema Utilizing the CEDAR Workbench.

Matthias Löbe, Aliaksandra Shutsko, Carsten Oliver Schmidt, Johannes Darms, Sophie Anne Ines Klopfenstein, Carina Nina Vorisek, Xiaoming Hu, Martin Golebiewski, Juliane Fluck

Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023

Bringing Communities Together: Mapping the Investigation-Study-Assay-Model (ISA) to Fast Healthcare Interoperability Resources (FHIR).

Sophie Anne Ines Klopfenstein, Julian Sass, Carina Nina Vorisek, Felix Jorczik, Carsten Oliver Schmidt, Matthias Löbe, Martin Golebiewski, Haitham Abaza, Sylvia Thun

Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

Provenance Core Data Set A Minimal Information Model for Data Provenance in Biomedical Research.

Ulrich Sax, Christian Henke, Christian Draeger, Theresa Bender, Alessandra Kuntz, Martin Golebiewski, Hannes Ulrich, Matthias Löbe

Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023

NFDI4Health Local Data Hubs for Finding and Accessing Health Data Making Distributed Data Accessible Through a SEEK-Based Platform.

Frank A. Meineke, Martin Golebiewski, Xiaoming Hu, Toralf Kirsten, Matthias Löbe, Sebastian Klammt, Ulrich Sax, Wolfgang Müller

Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023

Data Publication for Personalised Health Data A New Publication Standard Introduced by NFDI4Health.

Juliane Fluck, Martin Golebiewski, Johannes Darms

Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023

2021

Specifications of standards in systems and synthetic biology: status and developments in 2021.

Falk Schreiber, Padraig Gleeson, Martin Golebiewski, Thomas E. Gorochowski, Michael Hucka, Sarah M. Keating, Matthias König, Chris J. Myers, David P. Nickerson, Björn Sommer, Dagmar Waltemath

J. Integr. Bioinform., 2021

Facilitating Study and Item Level Browsing for Clinical and Epidemiological COVID-19 Studies.

Carsten Oliver Schmidt, Johannes Darms, Aliaksandra Shutsko, Matthias Löbe, Rajini Nagrani, Bastian Seifert, Birte Lindstädt, Martin Golebiewski, Sofiya Koleva, Theresa Bender, Christian Robert Bauer, Ulrich Sax, Xiaoming Hu, Michael Lieser, Vivien Junker, Sophie Klopfenstein, Atinkut Zeleke, Dagmar Waltemath, Iris Pigeot, Juliane Fluck

Proceedings of the Public Health and Informatics, 2021

Improving the FAIRness of Health Studies in Germany: The German Central Health Study Hub COVID-19.

Johannes Darms, Jörg Henke, Xiaoming Hu, Carsten Oliver Schmidt, Martin Golebiewski, Juliane Fluck

Proceedings of the Applying the FAIR Principles to Accelerate Health Research in Europe in the Post COVID-19 Era, 2021

2020

The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE).

Dagmar Waltemath, Martin Golebiewski, Michael L. Blinov, Padraig Gleeson, Henning Hermjakob, Michael Hucka, Esther Thea Inau, Sarah M. Keating, Matthias König, Olga Krebs, Rahuman S. Malik-Sheriff, David P. Nickerson, Ernst Oberortner, Herbert M. Sauro, Falk Schreiber, Lucian P. Smith, Melanie I. Stefan, Ulrike Wittig, Chris J. Myers

J. Integr. Bioinform., 2020

Specifications of standards in systems and synthetic biology: status and developments in 2020.

Falk Schreiber, Björn Sommer, Tobias Czauderna, Martin Golebiewski, Thomas E. Gorochowski, Michael Hucka, Sarah M. Keating, Matthias König, Chris J. Myers, David P. Nickerson, Dagmar Waltemath

J. Integr. Bioinform., 2020

Towards standardization guidelines for in silico approaches in personalized medicine.

Søren Brunak, Catherine Bjerre Collin, Katharina Eva Ó Cathaoir, Martin Golebiewski, Marc Kirschner, Ingrid Kockum, Heike Moser, Dagmar Waltemath

J. Integr. Bioinform., 2020

2019

Data Formats for Systems Biology and Quantitative Modeling.

Martin Golebiewski

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019.

Falk Schreiber, Björn Sommer, Gary D. Bader, Padraig Gleeson, Martin Golebiewski, Michael Hucka, Sarah M. Keating, Matthias König, Chris J. Myers, David P. Nickerson, Dagmar Waltemath

J. Integr. Bioinform., 2019

Harmonizing semantic annotations for computational models in biology.

Maxwell Lewis Neal, Matthias König, David P. Nickerson, Goksel Misirli, Reza Kalbasi, Andreas Dräger, Koray Atalag, Vijayalakshmi Chelliah, Michael T. Cooling, Daniel L. Cook, Sharon M. Crook, Miguel de Alba, Samuel H. Friedman, Alan Garny, John H. Gennari, Padraig Gleeson, Martin Golebiewski, Michael Hucka, Nick S. Juty, Chris J. Myers, Brett G. Olivier, Herbert M. Sauro, Martin Scharm, Jacky L. Snoep, Vasundra Touré, Anil Wipat, Olaf Wolkenhauer, Dagmar Waltemath

Briefings Bioinform., 2019

2018

Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2017.

Falk Schreiber, Gary D. Bader, Padraig Gleeson, Martin Golebiewski, Michael Hucka, Sarah M. Keating, Nicolas Le Novère, Chris J. Myers, David P. Nickerson, Björn Sommer, Dagmar Waltemath

J. Integr. Bioinform., 2018

2017

FAIRDOMHub: a repository and collaboration environment for sharing systems biology research.

Katherine Wolstencroft, Olga Krebs, Jacky L. Snoep, Natalie J. Stanford, Finn Bacall, Martin Golebiewski, Rostyk Kuzyakiv, Quyen Nguyen, Stuart Owen, Stian Soiland-Reyes, Jakub Straszewski, David D. van Niekerk, Alan R. Williams, Lars Malmström, Bernd Rinn, Wolfgang Müller, Carole A. Goble

Nucleic Acids Res., 2017

SABIO-RK, von Daten in der Publikation zur Suchlösung für Spezialisten.

Wolfgang Müller, Meik Bittkowski, Martin Golebiewski, Renate Kania, Maja Rey, Andreas Weidemann, Ulrike Wittig

Datenbank-Spektrum, 2017

A brief history of COMBINE.

Chris J. Myers, Gary D. Bader, Padraig Gleeson, Martin Golebiewski, Michael Hucka, Nicolas Le Novère, David P. Nickerson, Falk Schreiber, Dagmar Waltemath

Proceedings of the 2017 Winter Simulation Conference, 2017

2016

Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016.

Falk Schreiber, Gary D. Bader, Padraig Gleeson, Martin Golebiewski, Michael Hucka, Nicolas Le Novère, Chris J. Myers, David P. Nickerson, Björn Sommer, Dagmar Waltemath

J. Integr. Bioinform., 2016

FAIRDOM approach for semantic interoperability of systems biology data and models.

Olga Krebs, Katy Wolstencroft, Natalie J. Stanford, Norman Morrison, Martin Golebiewski, Rostyk Kuzyakiv, Stuart Owen, Quyen Nguyen, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble

Proceedings of the 7th Workshop on Ontologies and Data in Life Sciences, 2016

2015

Specifications of Standards in Systems and Synthetic Biology.

Falk Schreiber, Gary D. Bader, Martin Golebiewski, Michael Hucka, Benjamin Kormeier, Nicolas Le Novère, Chris J. Myers, David P. Nickerson, Björn Sommer, Dagmar Waltemath, Stephan Weise

J. Integr. Bioinform., 2015

SEEK: a systems biology data and model management platform.

Katherine Wolstencroft, Stuart Owen, Olga Krebs, Quyen Nguyen, Natalie J. Stanford, Martin Golebiewski, Andreas Weidemann, Meik Bittkowski, Lihua An, David Shockley, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble

BMC Syst. Biol., 2015

FAIRDOM approach for semantic interoperability of systems biology data and models.

Olga Krebs, Katy Wolstencroft, Natalie J. Stanford, Norman Morrison, Martin Golebiewski, Stuart Owen, Quyen Nguyen, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble

Proceedings of the International Conference on Biomedical Ontology, 2015

2014

COMBINE archive: One File To Share Them All.

Frank T. Bergmann, Richard Adams, Stuart L. Moodie, Jonathan Cooper, Mihai Glont, Martin Golebiewski, Michael Hucka, Camille Laibe, Andrew K. Miller, David P. Nickerson, Brett G. Olivier, Nicolas Rodriguez, Herbert M. Sauro, Martin Scharm, Stian Soiland-Reyes, Dagmar Waltemath, Florent Yvon, Nicolas Le Novère

CoRR, 2014

COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project.

Frank T. Bergmann, Richard R. Adams, Stuart L. Moodie, Jonathan Cooper, Mihai Glont, Martin Golebiewski, Michael Hucka, Camille Laibe, Andrew K. Miller, David P. Nickerson, Brett G. Olivier, Nicolas Rodriguez, Herbert M. Sauro, Martin Scharm, Stian Soiland-Reyes, Dagmar Waltemath, Florent Yvon, Nicolas Le Novère

BMC Bioinform., 2014

2013

Path2Models: large-scale generation of computational models from biochemical pathway maps.

Finja Büchel, Nicolas Rodriguez, Neil Swainston, Clemens Wrzodek, Tobias Czauderna, Roland Keller, Florian Mittag, Michael Schubert, Mihai Glont, Martin Golebiewski, Martijn P. van Iersel, Sarah M. Keating, Matthias Rall, Michael Wybrow, Henning Hermjakob, Michael Hucka, Douglas B. Kell, Wolfgang Müller, Pedro Mendes, Andreas Zell, Claudine Chaouiya, Julio Saez-Rodriguez, Falk Schreiber, Camille Laibe, Andreas Dräger, Nicolas Le Novère

BMC Syst. Biol., 2013

2012

SABIO-RK - database for biochemical reaction kinetics.

Ulrike Wittig, Renate Kania, Martin Golebiewski, Maja Rey, Lei Shi, Lenneke Jong, Enkhjargal Algaa, Andreas Weidemann, Heidrun Sauer-Danzwith, Saqib Mir, Olga Krebs, Meik Bittkowski, Elina Wetsch, Isabel Rojas, Wolfgang Müller

Nucleic Acids Res., 2012

2009

SBML2L^AT_EX: Conversion of SBML files into human-readable reports.

Andreas Dräger, Hannes Planatscher, Dieudonné Motsou Wouamba, Adrian Schröder, Michael Hucka, Lukas Endler, Martin Golebiewski, Wolfgang Müller, Andreas Zell

Bioinform., 2009

Flache und semantische Verarbeitung von Namen biochemischer Verbindungen.

Henriette Engelken, Martin Golebiewski, Meik Bittkowski, Fritz Hamm, Jasmin Saric, Ulrike Wittig, Wolfgang Müller, Uwe Reyle, Isabel Rojas

Proceedings of the 39. Jahrestagung der Gesellschaft für Informatik, Im Focus das Leben, INFORMATIK 2009, Lübeck, Germany, September 28, 2009

2007

SABIO-RK: A data warehouse for biochemical reactions and their kinetics.

Olga Krebs, Martin Golebiewski, Renate Kania, Saqib Mir, Jasmin Saric, Andreas Weidemann, Ulrike Wittig, Isabel Rojas

J. Integr. Bioinform., 2007

Storing and Annotating of Kinetic Data.

Isabel Rojas, Martin Golebiewski, Renate Kania, Olga Krebs, Saqib Mir, Andreas Weidemann, Ulrike Wittig

Silico Biol., 2007

SABIO-RK: a database for biochemical reactions and their kinetics.

Isabel Rojas, Martin Golebiewski, Renate Kania, Olga Krebs, Saqib Mir, Andreas Weidemann, Ulrike Wittig

BMC Syst. Biol., 2007

Integration of SABIO-RK in workbenches for kinetic model design.

Martin Golebiewski, Saqib Mir, Renate Kania, Olga Krebs, Andreas Weidemann, Ulrike Wittig, Isabel Rojas

BMC Syst. Biol., 2007

2006

SABIO-RK: Integration and Curation of Reaction Kinetics Data.

Ulrike Wittig, Martin Golebiewski, Renate Kania, Olga Krebs, Saqib Mir, Andreas Weidemann, Stefanie Anstein, Jasmin Saric, Isabel Rojas

Proceedings of the Data Integration in the Life Sciences, Third International Workshop, 2006