Ursula Kummer

Orcid: 0000-0002-6413-2382

According to our database1, Ursula Kummer authored at least 18 papers between 2003 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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PhD thesis 
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Links

On csauthors.net:

Bibliography

2023
Embedding the de.NBI Cloud in the National Research Data Infrastructure Activities.
Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023

2022
Stochastic dynamics of Type-I interferon responses.
PLoS Comput. Biol., October, 2022

2021
Impact of explicit area scaling on kinetic models involving multiple compartments.
BMC Bioinform., 2021

2017
A new efficient approach to fit stochastic models on the basis of high-throughput experimental data using a model of IRF7 gene expression as case study.
BMC Syst. Biol., 2017

2013
Organism-Adapted Specificity of the Allosteric Regulation of Pyruvate Kinase in Lactic Acid Bacteria.
PLoS Comput. Biol., 2013

2012
Simplification of biochemical models: a general approach based on the analysis of the impact of individual species and reactions on the systems dynamics.
BMC Syst. Biol., 2012

2009
The metabolic pH response in Lactococcus lactis: An integrative experimental and modelling approach.
Comput. Biol. Chem., 2009

Accessible methods for the dynamic time-scale decomposition of biochemical systems.
Bioinform., 2009

2008
Information transfer in signaling pathways: A study using coupled simulated and experimental data.
BMC Bioinform., 2008

SYCAMORE - a systems biology computational analysis and modeling research environment.
Bioinform., 2008

2007
Usage of Reaction Kinetics Data Stored in Databases - A Modeler's Point of View.
Silico Biol., 2007

2006
COPASI - a COmplex PAthway SImulator.
Bioinform., 2006

Approaches to complexity reduction in a systems biology research environment (SYCAMORE).
Proceedings of the Winter Simulation Conference WSC 2006, 2006

Simulation of biochemical networks using COPASI: a complex pathway simulator.
Proceedings of the Winter Simulation Conference WSC 2006, 2006

2005
A New Time-Dependent Complexity Reduction Method for Biochemical Systems.
Trans. Comp. Sys. Biology, 2005

A new dynamical layout algorithm for complex biochemical reaction networks.
BMC Bioinform., 2005

2004
combAlign: A protein sequence comparison algorithm considering recombinations.
Silico Biol., 2004

2003
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models.
Bioinform., 2003


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