Jean-François Gibrat

Orcid: 0000-0002-2623-5698

According to our database1, Jean-François Gibrat authored at least 24 papers between 1994 and 2018.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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PhD thesis 
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Links

On csauthors.net:

Bibliography

2018
A short note on dynamic programming in a band.
BMC Bioinform., 2018

2017
An Error Correction Algorithm for NGS Data.
Proceedings of the 28th International Workshop on Database and Expert Systems Applications, 2017

2016
Synchronized navigation and comparative analyses across Ensembl complete bacterial genomes with INSYGHT.
Bioinform., 2016

CYCLONE: A Platform for Data Intensive Scientific Applications in Heterogeneous Multi-cloud/Multi-provider Environment.
Proceedings of the 2016 IEEE International Conference on Cloud Engineering Workshop, 2016

An Economical Security Architecture for Multi-cloud Application Deployments in Federated Environments.
Proceedings of the Economics of Grids, Clouds, Systems, and Services, 2016

Représentation systémique multi-échelle des processus biologiques de la bactérie.
Proceedings of the IC 2016 : 27es Journées francophones d'Ingénierie des Connaissances (Proceedings of the 27th French Knowledge Engineering Conference), 2016

CYCLONE: A Multi-cloud Federation Platform for Complex Bioinformatics and Energy Applications (Short Paper).
Proceedings of the 5th IEEE International Conference on Cloud Networking, 2016

2015

2012
Mapping Reads on a Genomic Sequence: An Algorithmic Overview and a Practical Comparative Analysis.
J. Comput. Biol., 2012

Statistical Significance of Threading Scores.
J. Comput. Biol., 2012

DOMIRE: a web server for identifying structural domains and their neighbors in proteins.
Bioinform., 2012

2011
Local protein threading by Mixed Integer Programming.
Discret. Appl. Math., 2011

2010
Amino acid "little Big Bang": Representing amino acid substitution matrices as dot products of Euclidian vectors.
BMC Bioinform., 2010

2009
An Adaptive Combination of Matchers: Application to the Mapping of Biological Ontologies for Genome Annotation.
Proceedings of the Data Integration in the Life Sciences, 6th International Workshop, 2009

Protein Threading.
Proceedings of the 8th Cologne-Twente Workshop on Graphs and Combinatorial Optimization, 2009

2008
Can molecular dynamics simulations help in discriminating correct from erroneous protein 3D models?
BMC Bioinform., 2008

Towards an automatic classification of protein structural domains based on structural similarity.
BMC Bioinform., 2008

Mesures Hiérarchiques pondérées pour l'évaluation d'un système semi-automatique d'annotation de génomes utilisant des arbres de décision.
Proceedings of the Extraction et gestion des connaissances (EGC'2008), 2008

2007
Recent Advances in Solving the Protein Threading Problem
CoRR, 2007

Recent Advances in Solving the Protein Threading Problem.
Proceedings of the Grid Computing for Bioinformatics and Computational Biology, 2007

2006
ROC and confusion analysis of structure comparison methods identify the main causes of divergence from manual protein classification.
BMC Bioinform., 2006

2005
Choosing the Optimal Hidden Markov Model for Secondary-Structure Prediction.
IEEE Intell. Syst., 2005

FROST: Revisited and Distributed.
Proceedings of the 19th International Parallel and Distributed Processing Symposium (IPDPS 2005), 2005

1994
Normal Mode Analysis of Oligomeric Proteins: Reduction of the Memory Requirement by Consideration of Rigid Geomertry and Molecular Symmetry.
J. Comput. Chem., 1994


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