Katerina C. Nastou

According to our database, Katerina C. Nastou authored at least 9 papers between 2021 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

LSD600: the first corpus of biomedical abstracts annotated with lifestyle-disease relations.

Esmaeil Nourani, Evangelia-Mantelena Makri, Xiqing Mao, Sampo Pyysalo, Søren Brunak, Katerina C. Nastou, Lars Juhl Jensen

Database J. Biol. Databases Curation, 2025

2024

FAVA: high-quality functional association networks inferred from scRNA-seq and proteomics data.

Mikaela Koutrouli, Katerina C. Nastou, Pau Piera Líndez, Robbin Bouwmeester, Simon Rasmussen, Lennart Martens, Lars Juhl Jensen

Bioinform., February, 2024

RegulaTome: a corpus of typed, directed, and signed relations between biomedical entities in the scientific literature.

Katerina C. Nastou, Farrokh Mehryary, Tomoko Ohta, Jouni Luoma, Sampo Pyysalo, Lars Juhl Jensen

Database J. Biol. Databases Curation, January, 2024

Lifestyle factors in the biomedical literature: an ontology and comprehensive resources for named entity recognition.

Esmaeil Nourani, Mikaela Koutrouli, Yijia Xie, Danai Vagiaki, Sampo Pyysalo, Katerina C. Nastou, Søren Brunak, Lars Juhl Jensen

Bioinform., 2024

Improving dictionary-based named entity recognition with deep learning.

Katerina C. Nastou, Mikaela Koutrouli, Sampo Pyysalo, Lars Juhl Jensen

Bioinform., 2024

STRING-ing together protein complexes: corpus and methods for extracting physical protein interactions from the biomedical literature.

Farrokh Mehryary, Katerina C. Nastou, Tomoko Ohta, Lars Juhl Jensen, Sampo Pyysalo

Bioinform., 2024

2023

The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interest.

Damian Szklarczyk, Rebecca Kirsch, Mikaela Koutrouli, Katerina C. Nastou, Farrokh Mehryary, Radja Hachilif, Annika L. Gable, Tao Fang, Nadezhda T. Doncheva, Sampo Pyysalo, Peer Bork, Lars Juhl Jensen, Christian von Mering

Nucleic Acids Res., January, 2023

S1000: a better taxonomic name corpus for biomedical information extraction.

Jouni Luoma, Katerina C. Nastou, Tomoko Ohta, Harttu Toivonen, Evangelos Pafilis, Lars Juhl Jensen, Sampo Pyysalo

Bioinform., 2023

2021

The STRING database in 2021: customizable protein-protein networks, and functional characterization of user-uploaded gene/measurement sets.

Damian Szklarczyk, Annika L. Gable, Katerina C. Nastou, David Lyon, Rebecca Kirsch, Sampo Pyysalo, Nadezhda T. Doncheva, Marc Legeay, Tao Fang, Peer Bork, Lars Juhl Jensen, Christian von Mering

Nucleic Acids Res., 2021