Narayanaswamy Srinivasan

According to our database1, Narayanaswamy Srinivasan authored at least 34 papers between 2001 and 2022.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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PhD thesis 
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Links

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Bibliography

2022
Shaking the β-Bulges.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

DSDBASE 2.0: updated version of DiSulphide dataBASE, a database on disulphide bonds in proteins.
Database J. Biol. Databases Curation, 2022

2019
iPBAvizu: a PyMOL plugin for an efficient 3D protein structure superimposition approach.
Source Code Biol. Medicine, 2019

2018
Same but not alike: Structure, flexibility and energetics of domains in multi-domain proteins are influenced by the presence of other domains.
PLoS Comput. Biol., 2018

Recognition of sites of functional specialisation in all known eukaryotic protein kinase families.
PLoS Comput. Biol., 2018

2015
NrichD database: sequence databases enriched with computationally designed protein-like sequences aid in remote homology detection.
Nucleic Acids Res., 2015

SInCRe - structural interactome computational resource for <i>Mycobacterium tuberculosis</i>.
Database J. Biol. Databases Curation, 2015

Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat.
Database J. Biol. Databases Curation, 2015

2014
Repertoire of protein kinases Encoded in the genome of zebrafish shows remarkably Large Population of PIM kinases.
J. Bioinform. Comput. Biol., 2014

CLAP: A web-server for automatic classification of proteins with special reference to multi-domain proteins.
BMC Bioinform., 2014

2013
DoSA: Database of Structural Alignments.
Database J. Biol. Databases Curation, 2013

2011
iPBA: a tool for protein structure comparison using sequence alignment strategies.
Nucleic Acids Res., 2011

Influence of Genomic and Other Biological Data Sets in the Understanding of Protein Structures, Functions and Interactions.
Int. J. Knowl. Discov. Bioinform., 2011

AlignHUSH : Alignment of HMMs Using Structure and Hydrophobicity information.
BMC Bioinform., 2011

2010
Prediction of Protein-Protein Interactions Between Human Host and Two Mycobacterial Organisms.
Int. J. Knowl. Discov. Bioinform., 2010

2009
Molecular and Structural Basis of Drift in the Functions of Closely-Related Homologous Enzyme Domains: Implications for Function Annotation Based on Homology Searches and Structural Genomics.
Silico Biol., 2009

How effective is the data on co-occurrence of domains in multi-domain proteins in prediction of protein-protein interactions?
Proceedings of the 2009 IEEE International Workshop on Genomic Signal Processing and Statistics, 2009

2008
A Data Integration Approach to Predict Host-Pathogen Protein-Protein Interactions: Application to Recognize Protein Interactions between Human and a Malarial Parasite.
Silico Biol., 2008

2007
PIC: Protein Interactions Calculator.
Nucleic Acids Res., 2007

2006
Protein Block Expert (PBE): a web-based protein structure analysis server using a structural alphabet.
Nucleic Acids Res., 2006

HARMONY: a server for the assessment of protein structures.
Nucleic Acids Res., 2006

MulPSSM: a database of multiple position-specific scoring matrices of protein domain families.
Nucleic Acids Res., 2006

Cascade PSI-BLAST web server: a remote homology search tool for relating protein domains.
Nucleic Acids Res., 2006

2005
PRODOC: a resource for the comparison of tethered protein domain architectures with in-built information on remotely related domain families.
Nucleic Acids Res., 2005

A New Domain Family in the Superfamily of Alkaline Phosphatases.
Silico Biol., 2005

Use of multiple profiles corresponding to a sequence alignment enables effective detection of remote homologues.
Bioinform., 2005

2004
KinG: a database of protein kinases in genomes.
Nucleic Acids Res., 2004

Identification and analysis of a new family of bacterial serine proteinases.
Silico Biol., 2004

Recognition of remotely related structural homologues using sequence profiles of aligned homologous protein structures.
Silico Biol., 2004

SUPFAM: A database of sequence superfamilies of protein domains.
BMC Bioinform., 2004

2003
Integration of related sequences with protein three-dimensional structural families in an updated version of PALI database.
Nucleic Acids Res., 2003

2002
SUPFAM - a database of potential protein superfamily relationships derived by comparing sequence-based and structure-based families: implications for structural genomics and function annotation in genomes.
Nucleic Acids Res., 2002

2001
PALI - a database of Phylogeny and ALIgnment of homologous protein structures.
Nucleic Acids Res., 2001

PALI: a database of alignments and phylogeny of homologous protein structures.
Bioinform., 2001


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