Orcun Goksel
Orcid: 0000-0002-8639-7373Affiliations:
- ETH Zurich, Computer Vision Lab, Switzerland
According to our database1,
Orcun Goksel
authored at least 111 papers
between 2005 and 2023.
Collaborative distances:
Collaborative distances:
Timeline
Legend:
Book In proceedings Article PhD thesis Dataset OtherLinks
Online presence:
On csauthors.net:
Bibliography
2023
Weakly supervised joint whole-slide segmentation and classification in prostate cancer.
Medical Image Anal., October, 2023
Medical Image Anal., October, 2023
Unpaired Translation from Semantic Label Maps to Images by Leveraging Domain-Specific Simulations.
CoRR, 2023
CoRR, 2023
2022
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022
Proceedings of the Computer Vision - ECCV 2022, 2022
2021
Hemodynamic response to sensory stimulation in mice: Comparison between functional ultrasound and optoacoustic imaging.
NeuroImage, 2021
Modality attention and sampling enables deep learning with heterogeneous marker combinations in fluorescence microscopy.
Nat. Mach. Intell., 2021
Medical Image Anal., 2021
Reducing annotation effort in digital pathology: A Co-Representation learning framework for classification tasks.
Medical Image Anal., 2021
Knowl. Based Syst., 2021
CoRR, 2021
Probabilistic Spatial Analysis in Quantitative Microscopy with Uncertainty-Aware Cell Detection using Deep Bayesian Regression of Density Maps.
CoRR, 2021
Hierarchical Cell-to-Tissue Graph Representations for Breast Cancer Subtyping in Digital Pathology.
CoRR, 2021
Learning ultrasound rendering from cross-sectional model slices for simulated training.
Int. J. Comput. Assist. Radiol. Surg., 2021
Int. J. Comput. Assist. Radiol. Surg., 2021
IJCARS - IPCAI 2021 Special Issue: Information Processing for Computer-Assisted Interventions, 12th International Conference 2021 - Part 1.
Int. J. Comput. Assist. Radiol. Surg., 2021
Content-Preserving Unpaired Translation from Simulated to Realistic Ultrasound Images.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021
Learning Whole-Slide Segmentation from Inexact and Incomplete Labels Using Tissue Graphs.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021
Utilizing Uncertainty Estimation in Deep Learning Segmentation of Fluorescence Microscopy Images with Missing Markers.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2021
2020
Computational Analysis of Subscapularis Tears and Pectoralis Major Transfers on Muscular Activity.
CoRR, 2020
Training Variational Networks with Multi-Domain Simulations: Speed-of-Sound Image Reconstruction.
CoRR, 2020
CoRR, 2020
Delineating Bone Surfaces in B-Mode Images Constrained by Physics of Ultrasound Propagation.
CoRR, 2020
Proceedings of the Advances in Neural Information Processing Systems 33: Annual Conference on Neural Information Processing Systems 2020, 2020
Proceedings of the Medical Ultrasound, and Preterm, Perinatal and Paediatric Image Analysis, 2020
HACT-Net: A Hierarchical Cell-to-Tissue Graph Neural Network for Histopathological Image Classification.
Proceedings of the Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, and Graphs in Biomedical Image Analysis, 2020
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020
Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020
2019
IEEE Trans. Biomed. Eng., 2019
High-Quality Immunohistochemical Stains Through Computational Assay Parameter Optimization.
IEEE Trans. Biomed. Eng., 2019
Acoustic Field Characterization of Medical Array Transducers Based on Unfocused Transmits and Single-Plane Hydrophone Measurements.
Sensors, 2019
Ultrasound simulation with animated anatomical models and on-the-fly fusion with real images via path-tracing.
Comput. Graph., 2019
Int. J. Comput. Assist. Radiol. Surg., 2019
Int. J. Comput. Assist. Radiol. Surg., 2019
A deep learning framework for context-aware mitotic activity estimation in whole slide images.
Proceedings of the Medical Imaging 2019: Digital Pathology, 2019
Deep Variational Networks with Exponential Weighting for Learning Computed Tomography.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019
Implicit Modeling With Uncertainty Estimation For Intravoxel Incoherent Motion Imaging.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019
Siamese Networks With Location Prior for Landmark Tracking in Liver Ultrasound Sequences.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019
Scatgan for Reconstruction of Ultrasound Scatterers Using Generative Adversarial Networks.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019
2018
IEEE Trans. Medical Imaging, 2018
Robust Reconstruction of Elasticity Using Ultrasound Imaging and Multi-Frequency Excitations.
IEEE Trans. Medical Imaging, 2018
Image-Based Reconstruction of Tissue Scatterers Using Beam Steering for Ultrasound Simulation.
IEEE Trans. Medical Imaging, 2018
Realistic Ultrasound Simulation of Complex Surface Models Using Interactive Monte-Carlo Path Tracing.
Comput. Graph. Forum, 2018
Int. J. Comput. Assist. Radiol. Surg., 2018
Registration of 3D freehand ultrasound to a bone model for orthopedic procedures of the forearm.
Int. J. Comput. Assist. Radiol. Surg., 2018
Image Reconstruction via Variational Network for Real-Time Hand-Held Sound-Speed Imaging.
Proceedings of the Machine Learning for Medical Image Reconstruction, 2018
Proceedings of the OR 2.0 Context-Aware Operating Theaters, Computer Assisted Robotic Endoscopy, Clinical Image-Based Procedures, - and - Skin Image Analysis, 2018
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018
Active Learning for Segmentation by Optimizing Content Information for Maximal Entropy.
Proceedings of the Deep Learning in Medical Image Analysis - and - Multimodal Learning for Clinical Decision Support, 2018
Learn the New, Keep the Old: Extending Pretrained Models with New Anatomy and Images.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018
2017
Isotropic Total Variation Regularization of Displacements in Parametric Image Registration.
IEEE Trans. Medical Imaging, 2017
Consistent reconstruction of 4D fetal heart ultrasound images to cope with fetal motion.
Int. J. Comput. Assist. Radiol. Surg., 2017
Int. J. Comput. Assist. Radiol. Surg., 2017
Int. J. Comput. Assist. Radiol. Surg., 2017
Comparison of texture synthesis methods for content generation in ultrasound simulation for training.
Proceedings of the Medical Imaging 2017: Image-Guided Procedures, 2017
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017
Proceedings of the 12th International Workshop on Graphics Recognitio, 2017
VISCERAL Anatomy Benchmarks for Organ Segmentation and Landmark Localization: Tasks and Results.
Proceedings of the Cloud-Based Benchmarking of Medical Image Analysis, 2017
2016
Cloud-Based Evaluation of Anatomical Structure Segmentation and Landmark Detection Algorithms: VISCERAL Anatomy Benchmarks.
IEEE Trans. Medical Imaging, 2016
IEEE Trans. Biomed. Eng., 2016
Proceedings of the 6th Eurographics Workshop on Visual Computing for Biology and Medicine, 2016
Proceedings of the Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging, 2016
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016
Graphical Modeling of Ultrasound Propagation in Tissue for Automatic Bone Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016
Proceedings of the Simulation and Synthesis in Medical Imaging, 2016
Proceedings of the Simulation and Synthesis in Medical Imaging, 2016
Temporal Prediction of Respiratory Motion Using a Trained Ensemble of Forecasting Methods.
Proceedings of the Medical Imaging and Augmented Reality - 7th International Conference, 2016
Analysis of excitation frequency in elasticity reconstruction using the FEM inverse-problem.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016
Model-based compensation of tissue deformation during data acquisition for interpolative ultrasound simulation.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016
Proceedings of the 14th ACM/IEEE Symposium on Embedded Systems for Real-Time Multimedia, 2016
2015
Biomechanically Constrained Surface Registration: Application to MR-TRUS Fusion for Prostate Interventions.
IEEE Trans. Medical Imaging, 2015
Thermal expansion imaging for monitoring lesion depth using M-mode ultrasound during cardiac RF ablation: in vitro study.
Int. J. Comput. Assist. Radiol. Surg., 2015
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015
Proceedings of the VISCERAL Anatomy3 Organ Segmentation Challenge co-located with IEEE International Symposium on Biomedical Imaging (ISBI 2015), 2015
Compliance boundary conditions for simulating deformations in a limited target region.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015
Scatterer reconstruction and parametrization of homogeneous tissue for ultrasound image simulation.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015
2014
IEEE Trans. Image Process., 2014
Proceedings of the Biomedical Image Registration - 6th International Workshop, 2014
Proceedings of the Medical Imaging 2014: Image Processing, 2014
Proceedings of the Medical Imaging 2014: Image Processing, 2014
Proceedings of the Abdominal Imaging. Computational and Clinical Applications, 2014
Multi-atlas Segmentation and Landmark Localization in Images with Large Field of View.
Proceedings of the Medical Computer Vision: Algorithms for Big Data, 2014
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014
2013
Mesh Adaptation for Improving Elasticity Reconstruction Using the FEM Inverse Problem.
IEEE Trans. Medical Imaging, 2013
IEEE Trans. Biomed. Eng., 2013
Estimation of atlas-based segmentation outcome: Leveraging information from unsegmented images.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013
Proceedings of the 2013 World Haptics Conference, 2013
Accuracy improvement in Cranio-Maxillofacial soft tissue simulation using a muscle embedded meshing approach.
Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013
2012
Deformable prostate registration from MR and TRUS images using surface error driven FEM models.
Proceedings of the Medical Imaging 2012: Image-Guided Procedures, 2012
Semi-supervised Segmentation Using Multiple Segmentation Hypotheses from a Single Atlas.
Proceedings of the Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging, 2012
2011
Haptic Simulator for Prostate Brachytherapy with Simulated Needle and Probe Interaction.
IEEE Trans. Haptics, 2011
Haptic simulation of needle and probe interaction with tissue for prostate brachytherapy training.
Proceedings of the IEEE World Haptics Conference, 2011
2010
Proceedings of the Biomedical Simulation, 5th International Symposium, 2010
2009
IEEE Trans. Medical Imaging, 2009
3D Prostate Segmentation in Ultrasound Images Based on Tapered and Deformed Ellipsoids.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009
2007
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007
2006
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006
2005
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005