Patrick Aloy

According to our database1, Patrick Aloy authored at least 20 papers between 1997 and 2020.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

Online presence:

On csauthors.net:

Bibliography

2020
A reference map of the human binary protein interactome.
Nat., 2020

Bioactivity Profile Similarities to Expand the Repertoire of COVID-19 Drugs.
J. Chem. Inf. Model., 2020

2017
Detecting similar binding pockets to enable systems polypharmacology.
PLoS Comput. Biol., 2017

A PanorOmic view of personal cancer genomes.
Nucleic Acids Res., 2017

2015
Using neighborhood cohesiveness to infer interactions between protein domains.
Bioinform., 2015

IntSide: a web server for the chemical and biological examination of drug side effects.
Bioinform., 2015

2014
3did: a catalog of domain-based interactions of known three-dimensional structure.
Nucleic Acids Res., 2014

2012
NetAligner - a network alignment server to compare complexes, pathways and whole interactomes.
Nucleic Acids Res., 2012

2011
3did: identification and classification of domain-based interactions of known three-dimensional structure.
Nucleic Acids Res., 2011

2010
Novel Peptide-Mediated Interactions Derived from High-Resolution 3-Dimensional Structures.
PLoS Comput. Biol., 2010

2009
Pushing Structural Information into the Yeast Interactome by High-Throughput Protein Docking Experiments.
PLoS Comput. Biol., 2009

3did Update: domain-domain and peptide-mediated interactions of known 3D structure.
Nucleic Acids Res., 2009

Exploiting gene deletion fitness effects in yeast to understand the modular architecture of protein complexes under different growth conditions.
BMC Syst. Biol., 2009

2008
Approved Drug Mimics of Short Peptide Ligands from Protein Interaction Motifs.
J. Chem. Inf. Model., 2008

2005
3did: interacting protein domains of known three-dimensional structure.
Nucleic Acids Res., 2005

2003
InterPreTS: protein Interaction Prediction through Tertiary Structure.
Bioinform., 2003

2001
Classification of protein disulphide-bridge topologies.
J. Comput. Aided Mol. Des., 2001

2000
Refinement of modelled structures by knowledge-based energy profiles and secondary structure prediction: Application to the human procarboxypeptidase A2.
J. Comput. Aided Mol. Des., 2000

1998
A Computational System for Modeling Flexible Protein-Protein and protein-DNA Docking.
Proceedings of the 6th International Conference on Intelligent Systems for Molecular Biology (ISMB-98), Montréal, Québec, Canada, June 28, 1998

1997
'TransMem': a neural network implemented in Excel spreadsheets for predicting transmembrane domains of proteins.
Comput. Appl. Biosci., 1997


  Loading...