Jochen Weile

According to our database, Jochen Weile authored at least 13 papers between 2007 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Pacybara: accurate long-read sequencing for barcoded mutagenized allelic libraries.

Jochen Weile, Gabrielle Ferra, Gabriel Boyle, Sriram Pendyala, Clara J. Amorosi, Chiann-Ling C. Yeh, Atina G. Coté, Nishka Kishore, Daniel Tabet, Warren van Loggerenberg, Ashyad Rayhan, Douglas M. Fowler, Maitreya J. Dunham, Frederick P. Roth

Bioinform., 2024

2021

MaveRegistry: a collaboration platform for multiplexed assays of variant effect.

Da Kuang, Jochen Weile, Nishka Kishore, Maria Nguyen, Alan F. Rubin, Stanley Fields, Douglas M. Fowler, Frederick P. Roth

Bioinform., 2021

Prioritizing genes for systematic variant effect mapping.

Da Kuang, Rebecca Truty, Jochen Weile, Britt Johnson, Keith Nykamp, Carlos Araya, Robert L. Nussbaum, Frederick P. Roth

Bioinform., 2021

2020

A reference map of the human binary protein interactome.

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoît Charloteaux, Dong-Sic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon-gang Choi, Claudia Colabella, Georges Coppin, Cassandra D'Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Tasan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nat., 2020

MaveQuest: a web resource for planning experimental tests of human variant effects.

Da Kuang, Jochen Weile, Roujia Li, Tom W. Ouellette, Jarry A. Barber, Frederick P. Roth

Bioinform., 2020

2019

A web application and service for imputing and visualizing missense variant effect maps.

Yingzhou Wu, Jochen Weile, Atina G. Coté, Song Sun, Jennifer J. Knapp, Marta Verby, Frederick P. Roth

Bioinform., 2019

2012

Bayesian integration of networks without gold standards.

Jochen Weile, Katherine James, Jennifer Hallinan, Simon J. Cockell, Phillip W. Lord, Anil Wipat, Darren J. Wilkinson

Bioinform., 2012

2011

KeyPathwayMiner: Detecting Case-Specific Biological Pathways Using Expression Data.

Nicolas Alcaraz, Hande Kücük, Jochen Weile, Anil Wipat, Jan Baumbach

Internet Math., 2011

Customizable views on semantically integrated networks for systems biology.

Jochen Weile, Matthew R. Pocock, Simon J. Cockell, Phillip W. Lord, James M. Dewar, Eva-Maria Holstein, Darren J. Wilkinson, David A. Lydall, Jennifer Hallinan, Anil Wipat

Bioinform., 2011

2010

An integrated dataset for in silico drug discovery.

Simon J. Cockell, Jochen Weile, Phillip W. Lord, Claire Wipat, Dmytro Andriychenko, Matthew R. Pocock, Darren J. Wilkinson, Malcolm Young, Anil Wipat

J. Integr. Bioinform., 2010

2009

Linking Life Sciences Data Using Graph-Based Mapping.

Jan Taubert, Matthew Hindle, Artem Lysenko, Jochen Weile, Jacob Köhler, Christopher J. Rawlings

Proceedings of the Data Integration in the Life Sciences, 6th International Workshop, 2009

2008

MoRAine - A web server for fast computational transcription factor binding motif re-annotation.

Jan Baumbach, Tobias Wittkop, Jochen Weile, Thomas Kohl, Sven Rahmann

J. Integr. Bioinform., 2008

2007

CoryneCenter - An online resource for the integrated analysis of corynebacterial genome and transcriptome data.

Heiko Neuweger, Jan Baumbach, Stefan P. Albaum, Thomas Bekel, Michael Dondrup, Andrea T. Hüser, Jörn Kalinowski, Sebastian Oehm, Alfred Pühler, Sven Rahmann, Jochen Weile, Alexander Goesmann

BMC Syst. Biol., 2007