Paul Thompson

According to our database1, Paul Thompson authored at least 99 papers between 1986 and 2018.

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Bibliography

2018
Identification of research hypotheses and new knowledge from scientific literature.
BMC Med. Inf. & Decision Making, 2018

Annotation and detection of drug effects in text for pharmacovigilance.
J. Cheminformatics, 2018

Naturalistic artistic decision-making and metacognition in the music studio.
Cognition, Technology & Work, 2018

A Latent Growth Model of Twitter Follower Growth Trajectories Over Time.
Proceedings of the 9th International Conference on Social Media and Society, 2018

Annotating Social Determinants of Health and Functional Status Information Using Publicly Accessible Corpora.
Proceedings of the AMIA 2018, 2018

2017
Enriching news events with meta-knowledge information.
Language Resources and Evaluation, 2017

Fast Predictive Simple Geodesic Regression.
Proceedings of the Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support, 2017

Multi-Modality Disease Modeling via Collective Deep Matrix Factorization.
Proceedings of the 23rd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Halifax, NS, Canada, August 13, 2017

Extracting Gene-Disease Relations from Text to Support Biomarker Discovery.
Proceedings of the 2017 International Conference on Digital Health, 2017

2016
A two-stage inference algorithm for gene regulation network models.
I. J. Computational Biology and Drug Design, 2016

MultiGrain/MAPPER: A distributed multiscale computing approach to modeling and simulating gene regulation networks.
Future Generation Comp. Syst., 2016

Supporting Biological Pathway Curation Through Text Mining.
Proceedings of the Data Analytics and Management in Data Intensive Domains, 2016

Identifying Content Types of Messages Related to Open Source Software Projects.
Proceedings of the Tenth International Conference on Language Resources and Evaluation LREC 2016, 2016

2015
Using text mining techniques to extract phenotypic information from the PhenoCHF corpus.
BMC Med. Inf. & Decision Making, 2015

Prediction of relevant biomedical documents: a human microbiome case study.
BioData Mining, 2015

Semantically enhanced search system for historical medical archives.
Proceedings of the 2015 Digital Heritage, Granada, Spain, September 28 - October 2, 2015, 2015

Mining the Biomedical Literature.
Proceedings of the Healthcare Data Analytics., 2015

2014
Corpus Linguistics: Method, Theory and Practice. Tony McEnery and Andrew Hardie.
LLC, 2014

A Hybrid Approach to Compiling Bilingual Dictionaries of Medical Terms from Parallel Corpora.
Proceedings of the Statistical Language and Speech Processing, 2014


The Influence of Network Topology on Reverse-engineering of Gene-regulatory Networks.
Proceedings of the International Conference on Computational Science, 2014

Comparable Study of Event Extraction in Newswire and Biomedical Domains.
Proceedings of the COLING 2014, 2014

A multi-model reverse-engineering algorithm for large gene regulation networks.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

Building a semantically annotated corpus for congestive heart and renal failure from clinical records and the literature.
Proceedings of the 5th International Workshop on Health Text Mining and Information Analysis, 2014

2013
"Mining events from the literature for bioinformatics applications" by S. Ananiadou, P. Thompson, and R. Nawaz; with Martin Vesely as coordinator.
SIGWEB Newsletter, 2013

Negated bio-events: analysis and identification.
BMC Bioinformatics, 2013

Deploying and sharing U-Compare workflows as web services.
J. Biomedical Semantics, 2013

News search using discourse analytics.
Proceedings of the 2013 Digital Heritage International Congress, Marseille, France, October 28, 2013

Facilitating the Analysis of Discourse Phenomena in an Interoperable NLP Platform.
Proceedings of the Computational Linguistics and Intelligent Text Processing, 2013

Enhancing Search: Events and Their Discourse Context.
Proceedings of the Computational Linguistics and Intelligent Text Processing, 2013

Reverse engineering of gene regulation models from multi-condition experiments.
Proceedings of the 2013 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), 2013

Towards a Better Understanding of Discourse: Integrating Multiple Discourse Annotation Perspectives Using UIMA.
Proceedings of the 7th Linguistic Annotation Workshop and Interoperability with Discourse, 2013

Extending an interoperable platform to facilitate the creation of multilingual and multimodal NLP applications.
Proceedings of the 51st Annual Meeting of the Association for Computational Linguistics, 2013

2012
Bisociative Exploration of Biological and Financial Literature Using Clustering.
Proceedings of the Bisociative Knowledge Discovery, 2012

Extracting semantically enriched events from biomedical literature.
BMC Bioinformatics, 2012

Boosting automatic event extraction from the literature using domain adaptation and coreference resolution.
Bioinformatics, 2012

A history of AI and Law in 50 papers: 25 years of the international conference on AI and Law.
Artif. Intell. Law, 2012

Biomedical Chinese-English CLIR Using an Extended CMeSH Resource to Expand Queries.
Proceedings of the Eighth International Conference on Language Resources and Evaluation, 2012

Identification of Manner in Bio-Events.
Proceedings of the Eighth International Conference on Language Resources and Evaluation, 2012

Vertebrae Tracking in Lumbar Spinal Video-Fluoroscopy Using Particle Filters with Semi-automatic Initialisation.
Proceedings of the Advances in Visual Computing - 8th International Symposium, 2012

Electrical stimulation for the management of aspiration during Swallowing.
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012

Collaborative Biomedical Information Retrieval.
Proceedings of the Information Retrieval and Knowledge Discovery in Biomedical Text, 2012

2011
Decentralised Solutions to the Cooperative Multi-Platform Navigation Problem.
IEEE Trans. Aerospace and Electronic Systems, 2011

Domain-specific entity extraction from noisy, unstructured data using ontology-guided search.
IJDAR, 2011

Enriching a biomedical event corpus with meta-knowledge annotation.
BMC Bioinformatics, 2011

The BioLexicon: a large-scale terminological resource for biomedical text mining.
BMC Bioinformatics, 2011

Extending a Tool Resource Framework with U-Compare.
Proceedings of the Human Language Technology Challenges for Computer Science and Linguistics, 2011

Distributed large scale terrain mapping for mining and autonomous systems.
Proceedings of the 2011 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2011

Promoting Interoperability of Resources in META-SHARE.
Proceedings of the Workshop on Language Resources, 2011

2010
System Development and Demonstration of a Cooperative UAV Team for Mapping and Tracking.
I. J. Robotics Res., 2010

Bayesian nonparametric quantile regression using splines.
Computational Statistics & Data Analysis, 2010

End-to-End QoS Measurement over a DVB-RCS Satellite Network.
Proceedings of the Personal Satellite Services - Second International ICST Confernce, 2010

Meta-Knowledge Annotation of Bio-Events.
Proceedings of the International Conference on Language Resources and Evaluation, 2010

Discretizing stochastic tractography: a fast implementation.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

Decentralised data fusion in 2-tree sensor networks.
Proceedings of the 13th Conference on Information Fusion, 2010

Evaluating a meta-knowledge annotation scheme for bio-events.
Proceedings of the Workshop on Negation and Speculation in Natural Language Processing, 2010

2009
Mapping and Tracking.
IEEE Robot. Automat. Mag., 2009

Dialogic Education and Technology: Expanding the Space of Learning.
J. Comp. Assisted Learning, 2009

Construction of an annotated corpus to support biomedical information extraction.
BMC Bioinformatics, 2009

TREC 2009 at the University of Buffalo: Interactive Legal E-Discovery With Enron Emails.
Proceedings of The Eighteenth Text REtrieval Conference, 2009

Three BioNLP Tools Powered by a Biological Lexicon.
Proceedings of the EACL 2009, 12th Conference of the European Chapter of the Association for Computational Linguistics, Proceedings of the Conference, Athens, Greece, March 30, 2009

Bootstrapping a Verb Lexicon for Biomedical Information Extraction.
Proceedings of the Computational Linguistics and Intelligent Text Processing, 2009

A standard-compliant global map of the bile acid/xenobiotic signaling network: Construction and automated query processing.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2009

Using domain knowledge for ontology-guided entity extraction from noisy, unstructured text data.
Proceedings of the Third Workshop on Analytics for Noisy Unstructured Text Data, 2009

2008
Looking back: On relevance, probabilistic indexing and information retrieval.
Inf. Process. Manage., 2008

Building a Bio-Event Annotated Corpus for the Acquisition of Semantic Frames from Biomedical Corpora.
Proceedings of the International Conference on Language Resources and Evaluation, 2008

Demonstrating the Benefits of Cooperation for a UAV Team Performing Vision Based Feature Localisation.
Proceedings of the Experimental Robotics, The Eleventh International Symposium, 2008

Event Frame Extraction Based on a Gene Regulation Corpus.
Proceedings of the COLING 2008, 2008

2007
Advances in Open Domain Question Answering Tomek Strzalkowski and Sanda Harabagiu (editors) (SUNY Albany and University of Texas at Dallas) Springer (Text, speech and language technology series, edited by Nancy Ide and Jean Véronis, volume 32), 2006, xxvi+566 pp; hardbound, ISBN 978-1-4020-4744-2.
Computational Linguistics, 2007

Overview of the TREC 2007 Legal Track.
Proceedings of The Sixteenth Text REtrieval Conference, 2007

Dartmouth College at TREC 2007 Legal Track.
Proceedings of The Sixteenth Text REtrieval Conference, 2007

The search problem posed by large heterogeneous data sets in litigation: possible future approaches to research.
Proceedings of the Eleventh International Conference on Artificial Intelligence and Law, 2007

2006
Analyzing Social Networks in E-Mail with Rich Syntactic Features.
Proceedings of the Intelligence and Security Informatics, 2006

Tracking Multiple Features including Cross-Feature Correlations, with Observation Parameter Uncertainties.
Proceedings of the 9th International Conference on Information Fusion, 2006

2005
Text Mining, Names and Security.
J. Database Manag., 2005

Development of an Angular Characterisation System for Cooperative UAV / UGV Applications.
Proceedings of the Field and Service Robotics, Results of the 5th International Conference, 2005

2004
Cognitive Hacking.
Proceedings of the Economics of Information Security, 2004

Language Modeling for Information Retrieval edited by W. Bruce CroftJohn Lafferty.
Computational Linguistics, 2004

Cognitive Hacking.
Advances in Computers, 2004

Semantic Information Infrastructure Protection (Invited Abstract).
Proceedings of the Security Management, Integrity, and Internal Control in Information Systems, 2004

2003
Dynamic Integration of Distributed Semantic Services: Infrastructure for Process Queries and Question Answering.
Proceedings of the Human Language Technology Conference of the North American Chapter of the Association for Computational Linguistics, 2003

A simple method for automated lung segmentation in x-ray CT images.
Proceedings of the Medical Imaging 2003: Image Processing, 2003

Semantic Hacking and Intelligence and Security Informatics (Extended Abstract).
Proceedings of the Intelligence and Security Informatics, First NSF/NIJ Symposium, 2003

Names: A New Frontier in Text Mining.
Proceedings of the Intelligence and Security Informatics, First NSF/NIJ Symposium, 2003

Behaviour Selection Using Neural Networks.
Proceedings of the 4th International Conference on Intelligent Games and Simulation (GAME-ON 2003), 2003

2002
Finding Out About: A Cognitive Perspective on Search Engine Technology and the WWW.
Inf. Retr., 2002

Cognitive Hacking: A Battle for the Mind.
IEEE Computer, 2002

2001
Workshop 3: classification crosswalks.
Proceedings of the ACM/IEEE Joint Conference on Digital Libraries, 2001

Automatic categorization of case law.
Proceedings of the Eigths International Conference on Artificial Intelligence and Law, 2001

1997
Name Searching and Information Retrieval.
Proceedings of the Second Conference on Empirical Methods in Natural Language Processing, 1997

1994
TREC-3 Ad Hoc Retrieval and Routing Experiments using the WIN System.
Proceedings of The Third Text REtrieval Conference, 1994

1993
Description of the PRC CEO Algorithm for TREC-2.
Proceedings of The Second Text REtrieval Conference, 1993

1992
Description of the PRC CEO Algorithm for TREC.
Proceedings of The First Text REtrieval Conference, 1992

1991
Machine Learning in the Combination of Expert Opinion Approach to IR.
Proceedings of the Eighth International Workshop (ML91), 1991

1990
A sensitivity analysis of a probabilistic information retrieval system.
JASIS, 1990

A combination of expert opinion approach to probabilistic information retrieval, part 2: Mathematical treatment of CEO model 3.
Inf. Process. Manage., 1990

A combination of expert opinion approach to probabilistic information retrieval, part 1: The conceptual model.
Inf. Process. Manage., 1990

1988
Subjective Probability and Information Retrieval: a Review of the Psychological literature.
Journal of Documentation, 1988

1986
An Inductive Search System: Theory, Design, and Implementation.
IEEE Trans. Systems, Man, and Cybernetics, 1986


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