Wendy W. Chapman

According to our database1, Wendy W. Chapman authored at least 130 papers between 1998 and 2019.

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Bibliography

2019
Health Informatics - Ambitions and Purpose.
Frontiers Digit. Health, 2019

Moonstone: a novel natural language processing system for inferring social risk from clinical narratives.
J. Biomed. Semant., 2019

Using Natural Language Processing to improve EHR Structured Data-based Surgical Site Infection Surveillance.
Proceedings of the AMIA 2019, 2019

Extracting Disease Onset from Family History Comments in the Electronic Health Record using Fast Healthcare Interoperability Resources.
Proceedings of the AMIA 2019, 2019

Researchers' Perspectives on Symptoms related to Cancer Pain: A Network Analysis of Literatures.
Proceedings of the AMIA 2019, 2019

Determination of Marital Status of Patients from Structured and Unstructured Electronic Healthcare Data.
Proceedings of the AMIA 2019, 2019

2018
Using clinical Natural Language Processing for health outcomes research: Overview and actionable suggestions for future advances.
J. Biomed. Informatics, 2018

NLPReViz: an interactive tool for natural language processing on clinical text.
J. Am. Medical Informatics Assoc., 2018

An Interactive NLP Tool for Signout Note Preparation.
Proceedings of the IEEE International Conference on Healthcare Informatics, 2018

Annotating Social Determinants of Health and Functional Status Information Using Publicly Accessible Corpora.
Proceedings of the AMIA 2018, 2018

Detecting Current Episodes of Cholecystitis-related Pain from Veterans Affairs Clinical Notes using Natural Language Processing.
Proceedings of the AMIA 2018, 2018

Detection of Healthcare-Associated Infections Using Electronic Health Record Data.
Proceedings of the AMIA 2018, 2018

Natural Language Processing at Scale - Perspectives from Five Healthcare Organizations.
Proceedings of the AMIA 2018, 2018

2017
An Interactive Tool for Natural Language Processing on Clinical Text.
CoRR, 2017

Extracting Intrauterine Device Usage from Clinical Texts Using Natural Language Processing.
Proceedings of the 2017 IEEE International Conference on Healthcare Informatics, 2017

Automatic Extraction of Social Determinants of Health from Veterans Affairs Clinical Documents using Natural Language Processing.
Proceedings of the Summit on Clinical Research Informatics, 2017

Developing and Assessing the Complexity of a Knowledge Base for Extracting Indications from Carotid Ultrasounds for the Veterans Health Administration.
Proceedings of the Summit on Clinical Research Informatics, 2017

Classifying Sentiment of Free-Text Comments in Patient Satisfaction Surveys.
Proceedings of the Summit on Clinical Research Informatics, 2017

Towards Automatic Detection of Surgical Site Infections.
Proceedings of the Summit on Clinical Research Informatics, 2017

A Comparison of Stroke Classifiers Leveraging Hospital Billing Codes versus Natural Language Processing.
Proceedings of the AMIA 2017, 2017

Detecting Evidence of Intra-abdominal Surgical Site Infections from Radiology Reports Using Natural Language Processing.
Proceedings of the AMIA 2017, 2017

"My work will surely speak for itself: " Visibility, Networking, and Self Promotion in Informatics.
Proceedings of the AMIA 2017, 2017

2016
Knowledge Author: facilitating user-driven, domain content development to support clinical information extraction.
J. Biomed. Semant., 2016

Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth Challenge 2013, Task 2.
J. Biomed. Semant., 2016

Extracting a stroke phenotype risk factor from Veteran Health Administration clinical reports: an information content analysis.
J. Biomed. Semant., 2016

Developing a web-based SKOS editor.
J. Biomed. Semant., 2016

Assessing the Feasibility of an Automated Suggestion System for Communicating Critical Findings from Chest Radiology Reports to Referring Physicians.
Proceedings of the 15th Workshop on Biomedical Natural Language Processing, 2016

Event Coreference in Support of Temporal Reasoning in Mental Health Notes.
Proceedings of the AMIA 2016, 2016

A Characterization of Emotional Valence to Support Review of Free-Text Press-Ganey Patient Satisfaction Survey Responses.
Proceedings of the AMIA 2016, 2016

Women in Informatics Leadership Forum.
Proceedings of the AMIA 2016, 2016

VIP: A Framework for Mining Clinical Concepts Using Knowledge Author Ontologies and Apache UIMA.
Proceedings of the AMIA 2016, 2016

Understanding patient satisfaction with received healthcare services: A natural language processing approach.
Proceedings of the AMIA 2016, 2016

2015
Evaluating the state of the art in disorder recognition and normalization of the clinical narrative.
J. Am. Medical Informatics Assoc., 2015

BluLab: Temporal Information Extraction for the 2015 Clinical TempEval Challenge.
Proceedings of the 9th International Workshop on Semantic Evaluation, 2015

SemEval-2015 Task 14: Analysis of Clinical Text.
Proceedings of the 9th International Workshop on Semantic Evaluation, 2015

Towards a Generalizable Time Expression Model for Temporal Reasoning in Clinical Notes.
Proceedings of the AMIA 2015, 2015

Annotating ADLs and IADLs in Veterans Affairs Clinical Documents.
Proceedings of the AMIA 2015, 2015

Developing Natural Language Processing Systems for Healthcare.
Proceedings of the AMIA 2015, 2015

RapTAT: A Tool for Assisted Annotation and Reviewer Training via Online Machine Learning.
Proceedings of the AMIA 2015, 2015

2014
Evaluating the effects of machine pre-annotation and an interactive annotation interface on manual de-identification of clinical text.
J. Biomed. Informatics, 2014

Cue-based assertion classification for Swedish clinical text - Developing a lexicon for pyConTextSwe.
Artif. Intell. Medicine, 2014

SemEval-2014 Task 7: Analysis of Clinical Text.
Proceedings of the 8th International Workshop on Semantic Evaluation, 2014

Task 2: ShARe/CLEF eHealth Evaluation Lab 2014.
Proceedings of the Working Notes for CLEF 2014 Conference, 2014

Overview of the ShARe/CLEF eHealth Evaluation Lab 2014.
Proceedings of the Information Access Evaluation. Multilinguality, Multimodality, and Interaction, 2014

Generating Patient Problem Lists from the ShARe Corpus using SNOMED CT/SNOMED CT CORE Problem List.
Proceedings of BioNLP, Baltimore, Maryland, USA, 2014

Disease/Disorder Semantic Template Filling - Information Extraction Challenge in the ShARe/CLEF eHealth Evaluation Lab 2014.
Proceedings of the AMIA 2014, 2014

A System Usability Study Assessing a Machine-Assisted Interactive Interface to Support Annotation of Protected Health Information in Clinical Texts.
Proceedings of the AMIA 2014, 2014

Developing a Knowledge Base for Detecting Carotid Stenosis with pyConText.
Proceedings of the AMIA 2014, 2014

2013
Using chief complaints for syndromic surveillance: A review of chief complaint based classifiers in North America.
J. Biomed. Informatics, 2013

Improving performance of natural language processing part-of-speech tagging on clinical narratives through domain adaptation.
J. Am. Medical Informatics Assoc., 2013

A common type system for clinical natural language processing.
J. Biomed. Semant., 2013

Extending the NegEx Lexicon for Multiple Languages.
Proceedings of the MEDINFO 2013, 2013

Overview of the ShARe/CLEF eHealth Evaluation Lab 2013.
Proceedings of the Information Access Evaluation. Multilinguality, Multimodality, and Visualization, 2013

Task 1: ShARe/CLEF eHealth Evaluation Lab 2013.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013

Task 2: ShARe/CLEF eHealth Evaluation Lab 2013.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013

Knowledge Representation for Topic Model Based Discharge Summary Clustering.
Proceedings of the AMIA 2013, 2013

Panel: Shared Resources, Shared Code, and Shared Activities in Clinical Natural Language Processing.
Proceedings of the AMIA 2013, 2013

Creating a Reference Standard of Acronym and Abbreviation Annotations for the ShARe/CLEF eHealth Challenge 2013.
Proceedings of the AMIA 2013, 2013

Semantic Annotation of Clinical Events for Generating a Problem List.
Proceedings of the AMIA 2013, 2013

Schema Builder: A Web-based User Interface for Authoring and Sharing Natural-Language Processing Schemas.
Proceedings of the AMIA 2013, 2013

An Information Extraction Based Search System for Clinical Records.
Proceedings of the AMIA 2013, 2013

Identifying Synonymy between SNOMED Clinical Terms of Varying Length Using Distributional Analysis of Electronic Health Records.
Proceedings of the AMIA 2013, 2013

2012
Building an automated SOAP classifier for emergency department reports.
J. Biomed. Informatics, 2012

An approach to improve LOINC mapping through augmentation of local test names.
J. Biomed. Informatics, 2012

Anaphoric reference in clinical reports: Characteristics of an annotated corpus.
J. Biomed. Informatics, 2012

A system for coreference resolution for the clinical narrative.
J. Am. Medical Informatics Assoc., 2012

iDASH: integrating data for analysis, anonymization, and sharing.
J. Am. Medical Informatics Assoc., 2012

Does Domain Knowledge Matter for Assertion Annotation in Clinical Texts?
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

The Frequency of ConText Lexical Items in Diverse Medical Texts.
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

Developing Resources to Assist in Development and Application of NLP to Clinical Texts.
Proceedings of the CLEF 2012 Evaluation Labs and Workshop, 2012

A Prototype Tool Set to Support Machine-Assisted Annotation.
Proceedings of the 2012 Workshop on Biomedical Natural Language Processing, 2012

Medical diagnosis lost in translation - Analysis of uncertainty and negation expressions in English and Swedish clinical texts.
Proceedings of the 2012 Workshop on Biomedical Natural Language Processing, 2012

On the Road Towards Developing a Publicly Available Corpus of De-identified Clinical Texts.
Proceedings of the AMIA 2012, 2012

TxtVect: A Tool for Extracting Features from Clinical Documents.
Proceedings of the AMIA 2012, 2012

Discovering Lexical Instantiations of Clinical Concepts using Web Services, WordNet and Corpus Resources.
Proceedings of the AMIA 2012, 2012

A Preliminary Approach for Creating a Semi-synthetic Multimodal Clinical Data Set from a Publicly Available Image Repository.
Proceedings of the AMIA 2012, 2012

2011
Coreference resolution: A review of general methodologies and applications in the clinical domain.
J. Biomed. Informatics, 2011

Document-level classification of CT pulmonary angiography reports based on an extension of the ConText algorithm.
J. Biomed. Informatics, 2011

Anaphoric relations in the clinical narrative: corpus creation.
J. Am. Medical Informatics Assoc., 2011

Natural language processing: an introduction.
J. Am. Medical Informatics Assoc., 2011

Developing a natural language processing application for measuring the quality of colonoscopy procedures.
J. Am. Medical Informatics Assoc., 2011

Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions.
J. Am. Medical Informatics Assoc., 2011

2010
Public sharing of research datasets: A pilot study of associations.
J. Informetrics, 2010

Developing syndrome definitions based on consensus and current use.
J. Am. Medical Informatics Assoc., 2010

2009
ConText: An algorithm for determining negation, experiencer, and temporal status from clinical reports.
J. Biomed. Informatics, 2009

What can natural language processing do for clinical decision support?
J. Biomed. Informatics, 2009

Current issues in biomedical text mining and natural language processing.
J. Biomed. Informatics, 2009

Developing a manually annotated clinical document corpus to identify phenotypic information for inflammatory bowel disease.
BMC Bioinform., 2009

Distinguishing Historical from Current Problems in Clinical Reports - Which Textual Features Help?
Proceedings of the BioNLP Workshop, BioNLP@HLT-NAACL 2009, 2009

ONYX: A System for the Semantic Analysis of Clinical Text.
Proceedings of the BioNLP Workshop, BioNLP@HLT-NAACL 2009, 2009

Methodology to Develop and Evaluate a Semantic Representation for NLP.
Proceedings of the AMIA 2009, 2009

2008
Evaluation of preprocessing techniques for chief complaint classification.
J. Biomed. Informatics, 2008

Evaluation of training with an annotation schema for manual annotation of clinical conditions from emergency department reports.
Int. J. Medical Informatics, 2008

A review of journal policies for sharing research data.
Proceedings of the Open Scholarship: Authority, Community, and Sustainability in the Age of Web 2.0, 2008

Temporal Annotation of Clinical Text.
Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing, 2008

Analysis of a Failed Clinical Decision Support System for Management of Congestive Heart Failure.
Proceedings of the AMIA 2008, 2008

Optimizing A Syndromic Surveillance Text Classifier for Influenza-like Illness: Does Document Source Matter?
Proceedings of the AMIA 2008, 2008

Identifying Data Sharing in Biomedical Literature.
Proceedings of the AMIA 2008, 2008

2007
Methods Paper: Heuristic Sample Selection to Minimize Reference Standard Training Set for a Part-Of-Speech Tagger.
J. Am. Medical Informatics Assoc., 2007

ConText: An Algorithm for Identifying Contextual Features from Clinical Text.
Proceedings of the Biological, translational, and clinical language processing, 2007

2006
Inductive creation of an annotation schema for manually indexing clinical conditions from emergency department reports.
J. Biomed. Informatics, 2006

Evaluating the Effectiveness of Four Contextual Features in Classifying Annotated Clinical Conditions in Emergency Department Reports.
Proceedings of the AMIA 2006, 2006

2005
Research Paper: Generating a Reliable Reference Standard Set for Syndromic Case Classification.
J. Am. Medical Informatics Assoc., 2005

Classifying free-text triage chief complaints into syndromic categories with natural language processing.
Artif. Intell. Medicine, 2005

A Software Tool to Assist Researchers in Coding Free Text Clinical Reports.
Proceedings of the AMIA 2005, 2005

Automating Tissue Bank Annotation from Pathology Reports - Comparison to a Gold Standard Expert Annotation Set.
Proceedings of the AMIA 2005, 2005

2004
Fever detection from free-text clinical records for biosurveillance.
J. Biomed. Informatics, 2004

Implementation and Evaluation of a Negation Tagger in a Pipeline-based System for Information Extraction from Pathology Reports.
Proceedings of the MEDINFO 2004, 2004

Analysis of Web Access Logs for Surveillance of Influenza.
Proceedings of the MEDINFO 2004, 2004

The RODS Open Source Project: Removing a Barrier to Syndromic Surveillance.
Proceedings of the MEDINFO 2004, 2004

Identifying Respiratory Findings in Emergency Department Reports for Biosurveillance using MetaMap.
Proceedings of the MEDINFO 2004, 2004

2003
Application of Information Technology: Automated Syndromic Surveillance for the 2002 Winter Olympics.
J. Am. Medical Informatics Assoc., 2003

Research Paper: Creating a Text Classifier to Detect Radiology Reports Describing Mediastinal Findings Associated with Inhalational Anthrax and Other Disorders.
J. Am. Medical Informatics Assoc., 2003

2002
Data, network, and application: technical description of the Utah RODS Winter Olympic Biosurveillance System.
Proceedings of the AMIA 2002, 2002

Accuracy of three classifiers of acute gastrointestinal syndrome for syndromic surveillance.
Proceedings of the AMIA 2002, 2002

Rapid deployment of an electronic disease surveillance system in the state of Utah for the 2002 Olympic Winter Games.
Proceedings of the AMIA 2002, 2002

Creating a Software Tool for the Clinical Researcher - the IPS System.
Proceedings of the AMIA 2002, 2002

In their own words? A terminological analysis of e-mail to a cancer information service.
Proceedings of the AMIA 2002, 2002

2001
A Comparison of Classification Algorithms to Automatically Identify Chest X-Ray Reports That Support Pneumonia.
J. Biomed. Informatics, 2001

A Simple Algorithm for Identifying Negated Findings and Diseases in Discharge Summaries.
J. Biomed. Informatics, 2001

IPS: A System That Uses Machine Learning to Help Locate Patient Records for Clinical Research.
Proceedings of the AMIA 2001, 2001

Evaluation of negation phrases in narrative clinical reports.
Proceedings of the AMIA 2001, 2001

Combining decision support methodologies to diagnose pneumonia.
Proceedings of the AMIA 2001, 2001

2000
Research Paper: Automatic Detection of Acute Bacterial Pneumonia from Chest X-ray Reports.
J. Am. Medical Informatics Assoc., 2000

Using Decision Tree Classifiers to Confirm Pneumonia Diagnosis.
Proceedings of the AMIA 2000, 2000

Contribution of a speech recognition system to a computerized pneumonia guideline in the emergency department.
Proceedings of the AMIA 2000, 2000

1999
Automatic identification of pneumonia related concepts on chest x-ray reports.
Proceedings of the AMIA 1999, 1999

Comparing expert systems for identifying chest x-ray reports that support pneumonia.
Proceedings of the AMIA 1999, 1999

Correct vs. Parsed Data for Inferring Pneumonia in Chest X-ray Reports.
Proceedings of the AMIA 1999, 1999

1998
Bayesian modeling for linking causally related observations in chest X-ray reports.
Proceedings of the AMIA 1998, 1998


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