Peilin Jia

Orcid: 0000-0003-4523-4153

According to our database1, Peilin Jia authored at least 49 papers between 2006 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2023
An Optimal DoS Attack Strategy With Pause and Restart Rules Under Energy Constraints.
IEEE Trans. Control. Netw. Syst., September, 2023

Benchmark of embedding-based methods for accurate and transferable prediction of drug response.
Briefings Bioinform., May, 2023

<i>deCS</i>: A Tool for Systematic Cell Type Annotations of Single-cell RNA Sequencing Data among Human Tissues.
Genom. Proteom. Bioinform., April, 2023

Multiobjective Optimization of Networked Switched Systems Subject to DoS Attack Using Artificial Bee Colony Algorithm.
IEEE Trans. Control. Netw. Syst., March, 2023

Brain Catalog: a comprehensive resource for the genetic landscape of brain-related traits.
Nucleic Acids Res., January, 2023

A Stackelberg Game Approach to the Stability of Networked Switched Systems Under DoS Attacks.
IEEE Trans. Netw. Sci. Eng., 2023

2022
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022.
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Nucleic Acids Res., 2022

CeDR Atlas: a knowledgebase of cellular drug response.
Nucleic Acids Res., 2022

WebCSEA: web-based cell-type-specific enrichment analysis of genes.
Nucleic Acids Res., 2022

2021
DeepFun: a deep learning sequence-based model to decipher non-coding variant effect in a tissue- and cell type-specific manner.
Nucleic Acids Res., 2021

CSEA-DB: an omnibus for human complex trait and cell type associations.
Nucleic Acids Res., 2021

KinaseMD: kinase mutations and drug response database.
Nucleic Acids Res., 2021

Deep4mC: systematic assessment and computational prediction for DNA N4-methylcytosine sites by deep learning.
Briefings Bioinform., 2021

Distinct effect of prenatal and postnatal brain expression across 20 brain disorders and anthropometric social traits: a systematic study of spatiotemporal modularity.
Briefings Bioinform., 2021

2020
VISDB: a manually curated database of viral integration sites in the human genome.
Nucleic Acids Res., 2020

TSEA-DB: a trait?tissue association map for human complex traits and diseases.
Nucleic Acids Res., 2020

6mA-Finder: a novel online tool for predicting DNA N6-methyladenine sites in genomes.
Bioinform., 2020

Critical microRNAs and regulatory motifs in cleft palate identified by a conserved miRNA-TF-gene network approach in humans and mice.
Briefings Bioinform., 2020

2019
deTS: tissue-specific enrichment analysis to decode tissue specificity.
Bioinform., 2019

CNet: a multi-omics approach to detecting clinically associated, combinatory genomic signatures.
Bioinform., 2019

Translational bioinformatics in mental health: open access data sources and computational biomarker discovery.
Briefings Bioinform., 2019

Distinct telomere length and molecular signatures in seminoma and non-seminoma of testicular germ cell tumor.
Briefings Bioinform., 2019

2018
TissGDB: tissue-specific gene database in cancer.
Nucleic Acids Res., 2018

ANCO-GeneDB: annotations and comprehensive analysis of candidate genes for alcohol, nicotine, cocaine and opioid dependence.
Database J. Biol. Databases Curation, 2018

Kinase impact assessment in the landscape of fusion genes that retain kinase domains: a pan-cancer study.
Briefings Bioinform., 2018

2017
SZGR 2.0: a one-stop shop of schizophrenia candidate genes.
Nucleic Acids Res., 2017

Impacts of somatic mutations on gene expression: an association perspective.
Briefings Bioinform., 2017

2015
Deciphering Signaling Pathway Networks to Understand the Molecular Mechanisms of Metformin Action.
PLoS Comput. Biol., 2015

A Gene Gravity Model for the Evolution of Cancer Genomes: A Study of 3, 000 Cancer Genomes across 9 Cancer Types.
PLoS Comput. Biol., 2015

EW_dmGWAS: edge-weighted dense module search for genome-wide association studies and gene expression profiles.
Bioinform., 2015

2014
VarWalker: Personalized Mutation Network Analysis of Putative Cancer Genes from Next-Generation Sequencing Data.
PLoS Comput. Biol., 2014

2013
Computational tools for copy number variation (CNV) detection using next-generation sequencing data: features and perspectives.
BMC Bioinform., 2013

Application of next generation sequencing to human gene fusion detection: computational tools, features and perspectives.
Briefings Bioinform., 2013

Network-based mutation analysis of putative cancer genes from next-generation sequencing data.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012
Network-Assisted Investigation of Combined Causal Signals from Genome-Wide Association Studies in Schizophrenia.
PLoS Comput. Biol., 2012

Integrative pathway analysis of genome-wide association studies and gene expression data in prostate cancer.
BMC Syst. Biol., 2012

2011
Do cancer proteins really interact strongly in the human protein-protein interaction network?
Comput. Biol. Chem., 2011

A comprehensive network and pathway analysis of candidate genes in major depressive disorder.
BMC Syst. Biol., 2011

An efficient hierarchical generalized linear mixed model for pathway analysis of genome-wide association studies.
Bioinform., 2011

dmGWAS: dense module searching for genome-wide association studies in protein-protein interaction networks.
Bioinform., 2011

Network-assisted causal gene detection in genome-wide association studies: an improved module search algorithm.
Proceedings of the 2011 IEEE International Workshop on Genomic Signal Processing and Statistics, 2011

2010
Assessing gene length biases in gene set analysis of Genome-Wide Association Studies.
Int. J. Comput. Biol. Drug Des., 2010

A Novel microRNA and transcription factor mediated regulatory network in schizophrenia.
BMC Syst. Biol., 2010

Pathway- and network-based analysis of GWAS data revealed susceptibility gene sets to schizophrenia.
BMC Bioinform., 2010

Investigating microRNA-transcription factor mediated regulatory network in glioblastoma.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2010

2009
A multi-dimensional evidence-based candidate gene prioritization approach for complex diseases-schizophrenia as a case.
Bioinform., 2009

Global Network Features of Cancer Genes in the Human Interactome.
Proceedings of the International Joint Conferences on Bioinformatics, 2009

Pathway and Network Analysis of Schizophrenia Candidate Genes under Meta-Analysis Linkage Peaks.
Proceedings of the International Joint Conferences on Bioinformatics, 2009

2006
Demonstration of two novel methods for predicting functional siRNA efficiency.
BMC Bioinform., 2006


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