Pierre Rouzé

According to our database1, Pierre Rouzé authored at least 20 papers between 1999 and 2008.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2008
ProSOM: core promoter prediction based on unsupervised clustering of DNA physical profiles.
Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008

2007
In search of the small ones: improved prediction of short exons in vertebrates, plants, fungi and protists.
Bioinform., 2007

2005
GeneFarm, structural and functional annotation of <i>Arabidopsis</i> gene and protein families by a network of experts.
Nucleic Acids Res., 2005

SpliceMachine: predicting splice sites from high-dimensional local context representations.
Bioinform., 2005

2004
Feature selection for splice site prediction: A new method using EDA-based feature ranking.
BMC Bioinform., 2004

Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences.
Bioinform., 2004

2003
Orphan gene finding - an exon assembly approach.
Theor. Comput. Sci., 2003

CATMA: a complete Arabidopsis GST database.
Nucleic Acids Res., 2003

Automatic design of gene-specific sequence tags for genome-wide functional studies.
Bioinform., 2003

AFLPinSilico, simulating AFLP fingerprints.
Bioinform., 2003

Fast feature selection using a simple estimation of distribution algorithm: a case study on splice site prediction.
Proceedings of the European Conference on Computational Biology (ECCB 2003), 2003

2002
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences.
Nucleic Acids Res., 2002

A Gibbs Sampling Method to Detect Overrepresented Motifs in the Upstream Regions of Coexpressed Genes.
J. Comput. Biol., 2002

INCLUSive: INtegrated Clustering, Upstream sequence retrieval and motif Sampling.
Bioinform., 2002

Feature subset selection for splice site prediction.
Proceedings of the European Conference on Computational Biology (ECCB 2002), 2002

2001
A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling.
Bioinform., 2001

A Gibbs sampling method to detect over-represented motifs in the upstream regions of co-expressed genes.
Proceedings of the Fifth Annual International Conference on Computational Biology, 2001

2000
EUGÈNE: An Eukaryotic Gene Finder That Combines Several Sources of Evidence.
Proceedings of the Computational Biology, 2000

1999
PlantCARE, a plant cis-acting regulatory element database.
Nucleic Acids Res., 1999

Evaluation of gene prediction software using a genomic data set: application to <$O_SSF>Arabidopsis thaliana<$C_SSF>sequences.
Bioinform., 1999


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