Stephen F. Altschul

According to our database1, Stephen F. Altschul authored at least 19 papers between 1989 and 2018.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

Homepages:

On csauthors.net:

Bibliography

2018
Initial Cluster Analysis.
Journal of Computational Biology, 2018

Outlier detection in BLAST hits.
Algorithms for Molecular Biology, 2018

2016
Inference of Functionally-Relevant N-acetyltransferase Residues Based on Statistical Correlations.
PLoS Computational Biology, 2016

Bayesian Top-Down Protein Sequence Alignment with Inferred Position-Specific Gap Penalties.
PLoS Computational Biology, 2016

2015
Log-odds sequence logos.
Bioinformatics, 2015

2013
Dirichlet Mixtures, the Dirichlet Process, and the Structure of Protein Space.
Journal of Computational Biology, 2013

2011
The Complexity of the Dirichlet Model for Multiple Alignment Data.
Journal of Computational Biology, 2011

On the Inference of Dirichlet Mixture Priors for Protein Sequence Comparison.
Journal of Computational Biology, 2011

An assessment of substitution scores for protein profile-profile comparison.
Bioinformatics, 2011

2010
The Construction and Use of Log-Odds Substitution Scores for Multiple Sequence Alignment.
PLoS Computational Biology, 2010

Compositional Adjustment of Dirichlet Mixture Priors.
Journal of Computational Biology, 2010

2008
Local Alignment (with Affine Gap Weights).
Proceedings of the Encyclopedia of Algorithms - 2008 Edition, 2008

The effectiveness of position- and composition-specific gap costs for protein similarity searches.
Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008

2005
The construction of amino acid substitution matrices for the comparison of proteins with non-standard compositions.
Bioinformatics, 2005

A structure-based method for protein sequence alignment.
Bioinformatics, 2005

1999
IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices.
Bioinformatics, 1999

1994
A Gibbs Sampler for the Detection of Subtle Motifs in Multiple Sequences.
Proceedings of the 27th Annual Hawaii International Conference on System Sciences (HICSS-27), 1994

1991
BioSCAN: A VLSI-Based System for Biosequence Analysis.
Proceedings of the Proceedings 1991 IEEE International Conference on Computer Design: VLSI in Computer & Processors, 1991

1989
Leaf Pairs and Tree Dissections.
SIAM J. Discrete Math., 1989


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