Yann Thoma

According to our database, Yann Thoma authored at least 33 papers between 2002 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

XSI - a genotype compression tool for compressive genomics in large biobanks.

Rick Wertenbroek, Simone Rubinacci, Ioannis Xenarios, Yann Thoma, Olivier Delaneau

Bioinform., 2022

2021

SpikeOnChip : A Custom Embedded Platform for Neuronal Activity Recording and Analysis.

Rick Wertenbroek, Yann Thoma, Flavio Maurizio Mor, Sara Grassi, Marc Olivier Heuschkel, Adrien Roux, Luc Stoppini

IEEE Trans. Biomed. Circuits Syst., 2021

2019

A low fluctuation control strategy for PMSM direct drive system targeting Particle Beam Instrumentation Application.

Jonathan Emery, Patrik Andersson, Federico Roncarolo, Yann Thoma

Proceedings of the 2019 IEEE Conference on Control Technology and Applications, 2019

Acceleration of the Pair-HMM forward algorithm on FPGA with cloud integration for GATK.

Rick Wertenbroek, Yann Thoma

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2018

k-mer Counting with FPGAs and HMC In-Memory Operations.

Rick Wertenbroek, Yann Thoma

Proceedings of the 2018 NASA/ESA Conference on Adaptive Hardware and Systems, 2018

2017

Pipelined Multi-FPGA Genomic Data Clustering.

Rick Wertenbroek, Enrico Petraglio, Yann Thoma

Proceedings of the Algorithms and Architectures for Parallel Processing, 2017

TUCUXI: An Intelligent System for Personalized Medicine from Individualization of Treatments to Research Databases and Back.

Alevtina Dubovitskaya, Thierry Buclin, Michael Ignaz Schumacher, Karl Aberer, Yann Thoma

Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

Genomic Data Clustering on FPGAs for Compression.

Enrico Petraglio, Rick Wertenbroek, Flavio Capitao, Nicolas Guex, Christian Iseli, Yann Thoma

Proceedings of the Applied Reconfigurable Computing - 13th International Symposium, 2017

2015

FPGA-GPU communicating through PCIe.

Yann Thoma, Alberto Dassatti, Daniel Molla, Enrico Petraglio

Microprocess. Microsystems, 2015

2014

Safe Implementation of Embedded Software for a Portable Device Supporting Drug Administration.

Alena Simalatsar, Romain Bornet, Wenqi You, Yann Thoma, Giovanni De Micheli

Proceedings of the 2014 IEEE International Conference on Bioinformatics and Bioengineering, 2014

2013

FPGA²: An open source framework for FPGA-GPU PCIe communication.

Yann Thoma, Alberto Dassatti, Daniel Molla

Proceedings of the 2012 International Conference on Reconfigurable Computing and FPGAs, 2013

2012

Math2Mat: From Octave/Matlab to VHDL.

Yann Thoma, Etienne Messerli, Michel Starkier, Daniel Molla, Sebastien Masle, Christophe Bianchi, Oliver Gubler, Claude Magliocco, Philippe Crausaz, Samuel Tache, Denis Prêtre, Gregory Trolliet

Proceedings of the 2012 NASA/ESA Conference on Adaptive Hardware and Systems, 2012

2010

Ubichip, Ubidule, and MarXbot: A Hardware Platform for the Simulation of Complex Systems.

Andres Upegui, Yann Thoma, Héctor F. Satizábal, Francesco Mondada, Philippe Rétornaz, Yoan Graf, Andrés Pérez-Uribe, Eduardo Sanchez

Proceedings of the Evolvable Systems: From Biology to Hardware, 2010

2008

The PERPLEXUS bio-inspired hardware platform: A flexible and modular approach.

Andres Upegui, Yann Thoma, Eduardo Sanchez, Andrés Pérez-Uribe, Juan Manuel Moreno, Jordi Madrenas, Gilles Sassatelli

Int. J. Knowl. Based Intell. Eng. Syst., 2008

Neural Development on the Ubichip by Means of Dynamic Routing Mechanisms.

Andres Upegui, Andrés Pérez-Uribe, Yann Thoma, Eduardo Sanchez

Proceedings of the Evolvable Systems: From Biology to Hardware, 2008

The Perplexus Programming Framework: Combining Bio-inspiration and Agent-Oriented Programming for the Simulation of Large Scale Complex Systems.

Olivier Brousse, Gilles Sassatelli, Thierry Gil, Michel Robert, François Grize, Eduardo Sanchez, Andres Upegui, Yann Thoma

Proceedings of the Evolvable Systems: From Biology to Hardware, 2008

BAF: A Bio-Inspired Agent Framework for Distributed Pervasive Applications.

Olivier Brousse, Gilles Sassatelli, Thierry Gil, Yoann Guillemenet, Michel Robert, François Grize, Eduardo Sanchez, Yann Thoma, Andres Upegui, Juan Manuel Moreno, Jordi Madrenas

Proceedings of the 2008 International Conference on Genetic and Evolutionary Methods, 2008

Dynamic Routing on the Ubichip: Toward Synaptogenetic Neural Networks.

Andres Upegui, Yann Thoma, Andrés Pérez-Uribe, Eduardo Sanchez

Proceedings of the NASA/ESA Conference on Adaptive Hardware and Systems, 2008

UbiManager: A Software Tool for Managing Ubichips.

Yann Thoma, Andres Upegui

Proceedings of the NASA/ESA Conference on Adaptive Hardware and Systems, 2008

2007

Fault Tolerance Using Dynamic Reconfiguration on the POEtic Tissue.

Will Barker, David M. Halliday, Yann Thoma, Eduardo Sanchez, Gianluca Tempesti, Andrew M. Tyrrell

IEEE Trans. Evol. Comput., 2007

The Perplexus bio-inspired reconfigurable circuit.

Andres Upegui, Yann Thoma, Eduardo Sanchez, Andrés Pérez-Uribe, Juan Manuel Moreno, Jordi Madrenas

Proceedings of the Second NASA/ESA Conference on Adaptive Hardware and Systems (AHS 2007), 2007

PERPLEXUS: Pervasive Computing Framework for Modeling Complex Virtually-Unbounded Systems.

Eduardo Sanchez, Andrés Pérez-Uribe, Andres Upegui, Yann Thoma, Juan Manuel Moreno, Alessandro E. P. Villa, Henri Volken, Andrzej Napieralski, Gilles Sassatelli, Erwan Lavarec

Proceedings of the Second NASA/ESA Conference on Adaptive Hardware and Systems (AHS 2007), 2007

2006

MOVE Processors That Self-replicate and Differentiate.

Joël Rossier, Yann Thoma, Pierre-André Mudry, Gianluca Tempesti

Proceedings of the Biologically Inspired Approaches to Advanced Information Technology, 2006

2005

An adaptive FPGA and its distributed routing.

Yann Thoma, Eduardo Sanchez

Proceedings of the 1st International Workshop on Reconfigurable Communication-centric Systems-on-Chip, 2005

POEtic: A Prototyping Platform for Bio-inspired Hardware.

Juan Manuel Moreno, Yann Thoma, Eduardo Sanchez

Proceedings of the Evolvable Systems: From Biology to Hardware, 2005

2004

Prototyping with a Bio-Inspired Reconfigurable Chip.

Yann Thoma, Eduardo Sanchez, Daniel Roggen, Carl Hetherington, Juan Manuel Moreno

Proceedings of the 15th IEEE International Workshop on Rapid System Prototyping (RSP 2004), 2004

A Reconfigurable Chip for Evolvable Hardware.

Yann Thoma, Eduardo Sanchez

Proceedings of the Genetic and Evolutionary Computation, 2004

Hardware Realization of a Bio-inspired POEtic Tissue.

Juan Manuel Moreno, Yann Thoma, Eduardo Sanchez, Oriol Torres, Gianluca Tempesti

Proceedings of the 6th NASA / DoD Workshop on Evolvable Hardware (EH 2004), 2004

2003

Ontogenetic Development and Fault Tolerance in the POEtic Tissue.

Gianluca Tempesti, Daniel Roggen, Eduardo Sanchez, Yann Thoma, Richard Canham, Andrew M. Tyrrell

Proceedings of the Evolvable Systems: From Biology to Hardware, 2003

A Dynamic Routing Algorithm for a Bio-inspired Reconfigurable Circuit.

Yann Thoma, Eduardo Sanchez, Juan-Manuel Moreno Aróstegui, Gianluca Tempesti

Proceedings of the Field Programmable Logic and Application, 13th International Conference, 2003

Developmental Processes in Silicon: An Engineering Perspective.

Gianluca Tempesti, Daniel Mange, Enrico Petraglio, André Stauffer, Yann Thoma

Proceedings of the 5th NASA / DoD Workshop on Evolvable Hardware (EH 2003), 2003

Hardware spiking neural network with run-time reconfigurable connectivity in.

Daniel Roggen, Stephane Hofmann, Yann Thoma, Dario Floreano

Proceedings of the 5th NASA / DoD Workshop on Evolvable Hardware (EH 2003), 2003

2002

CoDeNios: a function level co-design tool.

Yann Thoma, Eduardo Sanchez

Proceedings of the 2002 workshop on Computer architecture education, 2002