Alan R. Aronson

According to our database1, Alan R. Aronson authored at least 77 papers between 1976 and 2019.

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Bibliography

2019
Spell checker for consumer language (CSpell).
JAMIA, 2019

2018
Increasing UMLS Coverage and Reducing Ambiguity via Automated Creation of Synonymous Terms.
Proceedings of the AMIA 2018, 2018

Finding medication doses in the literature.
Proceedings of the AMIA 2018, 2018

2017
MetaMap Lite: an evaluation of a new Java implementation of MetaMap.
JAMIA, 2017

12 years on - Is the NLM medical text indexer still useful and relevant?
J. Biomedical Semantics, 2017

2015
Feature engineering for MEDLINE citation categorization with MeSH.
BMC Bioinformatics, 2015

2014
Applying MetaMap to Medline for identifying novel associations in a large clinical dataset: a feasibility analysis.
JAMIA, 2014

Recent Enhancements to the NLM Medical Text Indexer.
Proceedings of the Working Notes for CLEF 2014 Conference, 2014

A repository of semantic types in the MIMIC II database clinical notes.
Proceedings of BioNLP, Baltimore, Maryland, USA, 2014

Vocabulary Density Method for Customized Indexing of MEDLINE Journals.
Proceedings of the AMIA 2014, 2014

2013
GeneRIF indexing: sentence selection based on machine learning.
BMC Bioinformatics, 2013

MeSH indexing based on automatically generated summaries.
BMC Bioinformatics, 2013

The NLM Medical Text Indexer System for Indexing Biomedical Literature.
Proceedings of the first Workshop on Bio-Medical Semantic Indexing and Question Answering, 2013

Identifying Publication Types Using Machine Learning.
Proceedings of the first Workshop on Bio-Medical Semantic Indexing and Question Answering, 2013

Using the Argumentative Structure of Scientific Literature to Improve Information Access.
Proceedings of the 2013 Workshop on Biomedical Natural Language Processing, 2013

Comparison and combination of several MeSH indexing approaches.
Proceedings of the AMIA 2013, 2013

Mining MEDLINE for problems associated with vitamin D.
Proceedings of the AMIA 2013, 2013

2012
A One-Size-Fits-All Indexing Method Does Not Exist: Automatic Selection Based on Meta-Learning.
JCSE, 2012

NLM at TREC 2012 Medical Records Track.
Proceedings of The Twenty-First Text REtrieval Conference, 2012

MEDLINE MeSH indexing: lessons learned from machine learning and future directions.
Proceedings of the ACM International Health Informatics Symposium, 2012

Knowledge-based and knowledge-lean methods combined in unsupervised word sense disambiguation.
Proceedings of the ACM International Health Informatics Symposium, 2012

Integration of UMLS and MEDLINE in Unsupervised Word Sense Disambiguation.
Proceedings of the Information Retrieval and Knowledge Discovery in Biomedical Text, 2012

2011
Studying the correlation between different word sense disambiguation methods and summarization effectiveness in biomedical texts.
BMC Bioinformatics, 2011

Collocation analysis for UMLS knowledge-based word sense disambiguation.
BMC Bioinformatics, 2011

Exploiting MeSH indexing in MEDLINE to generate a data set for word sense disambiguation.
BMC Bioinformatics, 2011

A Knowledge-Based Approach to Medical Records Retrieval.
Proceedings of The Twentieth Text REtrieval Conference, 2011

Self-training and co-training in biomedical word sense disambiguation.
Proceedings of the 2011 Workshop on Biomedical Natural Language Processing, 2011

2010
Improving an automatically extracted corpus for UMLS Metathesaurus word sense disambiguation.
Procesamiento del Lenguaje Natural, 2010

UMLS content views appropriate for NLP processing of the biomedical literature vs. clinical text.
Journal of Biomedical Informatics, 2010

Extracting Rx information from clinical narrative.
JAMIA, 2010

An overview of MetaMap: historical perspective and recent advances.
JAMIA, 2010

Knowledge-based biomedical word sense disambiguation: comparison of approaches.
BMC Bioinformatics, 2010

Query Expansion for UMLS Metathesaurus Disambiguation Based on Automatic Corpus Extraction.
Proceedings of the Ninth International Conference on Machine Learning and Applications, 2010

2009
A recent advance in the automatic indexing of the biomedical literature.
Journal of Biomedical Informatics, 2009

Natural language processing versus content-based image analysis for medical document retrieval.
JASIST, 2009

Comment on 'MeSH-up: effective MeSH text classification for improved document retrieval'.
Bioinformatics, 2009

2008
Adoption and evaluation issues of automatic and computer aided indexing systems.
Proceedings of the People Transforming Information - Information Transforming People, 2008

Methodology for Creating UMLS Content Views Appropriate for Biomedical Natural Language Processing.
Proceedings of the AMIA 2008, 2008

2007
Combining Resources to Find Answers to Biomedical Questions.
Proceedings of The Sixteenth Text REtrieval Conference, 2007

Multiple Approaches to Fine-Grained Indexing of the Biomedical Literature.
Proceedings of the Biocomputing 2007, 2007

Using Discourse Analysis to Improve Text Categorization in MEDLINE.
Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

Combining Lexical and Semantic Methods of Inter-terminology Mapping Using the UMLS.
Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

Automatic Indexing of Specialized Documents: Using Generic vs. Domain-Specific Document Representations.
Proceedings of the Biological, translational, and clinical language processing, 2007

From indexing the biomedical literature to coding clinical text: experience with MTI and machine learning approaches.
Proceedings of the Biological, translational, and clinical language processing, 2007

Fine-Grained Indexing of the Biomedical Literature: MeSH Subheading Attachment for a MEDLINE Indexing Tool.
Proceedings of the AMIA 2007, 2007

2006
Finding Relevant Passages in Scientific Articles: Fusion of Automatic Approaches vs. an Interactive Team Effort.
Proceedings of the Fifteenth Text REtrieval Conference, 2006

Argumentative Feedback: A Linguistically-Motivated Term Expansion for Information Retrieval.
Proceedings of the ACL 2006, 2006

2005
Fusion of Knowledge-Intensive and Statistical Approaches for Retrieving and Annotating Textual Genomics Documents.
Proceedings of the Fourteenth Text REtrieval Conference, 2005

Evaluation of French and English MeSH Indexing Systems with a Parallel Corpus.
Proceedings of the AMIA 2005, 2005

Semi-Automatic Indexing of Full Text Biomedical Articles.
Proceedings of the AMIA 2005, 2005

2004
Knowledge-Intensive and Statistical Approaches to the Retrieval and Annotation of Genomics MEDLINE Citations.
Proceedings of the Thirteenth Text REtrieval Conference, 2004

Application of a Medical Text Indexer to an Online Dermatology Atlas.
Proceedings of the MEDINFO 2004, 2004

The NLM Indexing Initiative's Medical Text Indexer.
Proceedings of the MEDINFO 2004, 2004

2003
Towards linking patients and clinical information: detecting UMLS concepts in e-mail.
Journal of Biomedical Informatics, 2003

Case Report: Generating Hypotheses by Discovering Implicit Associations in the Literature: A Case Report of a Search for New Potential Therapeutic Uses for Thalidomide.
JAMIA, 2003

Methods for Accurate Retrieval of MEDLINE Citations in Functional Genomics.
Proceedings of The Twelfth Text REtrieval Conference, 2003

Semantic Relations Asserting the Etiology of Genetic Diseases.
Proceedings of the AMIA 2003, 2003

Gene Indexing: Characterization and Analysis of NLM's GeneRIFs.
Proceedings of the AMIA 2003, 2003

UMLS Language and Vocabulary Tools: AMIA 2003 Open Source Expo.
Proceedings of the AMIA 2003, 2003

2002
Mining the Epidemiological Literature for Risk Factors and Incidence Data of Kawasaki Disease.
Proceedings of the AMIA 2002, 2002

Finding UMLS Metathesaurus concepts in MEDLINE.
Proceedings of the AMIA 2002, 2002

A study of abbreviations in MEDLINE abstracts.
Proceedings of the AMIA 2002, 2002

2001
Developing a test collection for biomedical word sense disambiguation.
Proceedings of the AMIA 2001, 2001

Automatic MeSH term assignment and quality assessment.
Proceedings of the AMIA 2001, 2001

Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program.
Proceedings of the AMIA 2001, 2001

2000
Text-based discovery in biomedicine: the architecture of the DAD-system.
Proceedings of the AMIA 2000, 2000


1999
Hierarchical Concept Indexing of Full-Text Documents in the Unified Medical Language System® Information Sources Map.
JASIS, 1999

Analysis of biomedical text for chemical names: a comparison of three methods.
Proceedings of the AMIA 1999, 1999

Mining molecular binding terminology from biomedical text.
Proceedings of the AMIA 1999, 1999

Automated Assignment of Medical Subject Headings.
Proceedings of the AMIA 1999, 1999

From Bibliography to Test Collection: Enhancing Topical Relevance Assessment for Bibliographic Information Retrieval System Evaluation.
Proceedings of the AMIA 1999, 1999

1997
Query expansion using the UMLS Metathesaurus.
Proceedings of the AMIA 1997, 1997

1994
Exploiting a Large Thesaurus for Information Retrieval.
Proceedings of the Computer-Assisted Information Retrieval (Recherche d'Information et ses Applications), 1994

1982
On Interpretations of Relational Languages and Solutions to the Implied Constraint Problem.
ACM Trans. Database Syst., 1982

1980
A Note on Fuzzy Deduction.
J. ACM, 1980

1976
Grammatical inference by hill climbing.
Inf. Sci., 1976


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