Thomas C. Rindflesch

According to our database1, Thomas C. Rindflesch authored at least 105 papers between 1986 and 2018.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2018
Investigating the role of interleukin-1 beta and glutamate in inflammatory bowel disease and epilepsy using discovery browsing.
J. Biomedical Semantics, 2018

2017
Leveraging syntax to better capture the semantics of elliptical coordinated compound noun phrases.
Journal of Biomedical Informatics, 2017

Evolution of Research Topics in MEDLINE.
Proceedings of the AMIA 2017, 2017

2016
Using Literature-Based Discovery to Explain Adverse Drug Effects.
J. Medical Systems, 2016

Spark, an application based on Serendipitous Knowledge Discovery.
Journal of Biomedical Informatics, 2016

Sortal anaphora resolution to enhance relation extraction from biomedical literature.
BMC Bioinformatics, 2016

Evolution of MEDLINE bibliographic database: Preliminary results.
Proceedings of the 2016 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, 2016

Differentiating Sense through Semantic Interaction Data.
Proceedings of the AMIA 2016, 2016

Implementing Semantics-Based Cross-domain Collaboration Recommendation in Biomedicine with a Graph Database.
Proceedings of the AMIA 2016, 2016

2015
Context-driven automatic subgraph creation for literature-based discovery.
Journal of Biomedical Informatics, 2015

Biomedical question answering using semantic relations.
BMC Bioinformatics, 2015

Networks of neuroinjury semantic predications to identify biomarkers for mild traumatic brain injury.
J. Biomedical Semantics, 2015

Exploiting Semantic Predications in a Graph Database.
Proceedings of the Digital Healthcare Empowering Europeans, 2015

Constructing a Graph Database for Semantic Literature-Based Discovery.
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015

Semantics-Based Cross-domain Collaboration Recommendation in the Life Sciences: Preliminary Results.
Proceedings of the 2015 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, 2015

2014
Augmenting Microarray Data with Literature-Based Knowledge to Enhance Gene Regulatory Network Inference.
PLoS Computational Biology, 2014

Using semantic predications to uncover drug-drug interactions in clinical data.
Journal of Biomedical Informatics, 2014

Framing serendipitous information-seeking behavior for facilitating literature-based discovery: A proposed model.
JASIST, 2014

Smart and Connected Health [Guest editors' introduction].
IEEE Intelligent Systems, 2014

Expansion-by-Analogy: A Vector Symbolic Approach to Semantic Search.
Proceedings of the Quantum Interaction - 8th International Conference, 2014

Link Prediction in a MeSH Co-occurrence Network: Preliminary Results.
Proceedings of the e-Health - For Continuity of Care - Proceedings of MIE2014, the 25th European Medical Informatics Conference, Istanbul, Turkey, August 31, 2014

Link Prediction on the Semantic MEDLINE Network - An Approach to Literature-Based Discovery.
Proceedings of the Discovery Science - 17th International Conference, 2014

Identifying Plausible Adverse Drug Reactions Using Knowledge Extracted from the Literature.
Proceedings of the AMIA 2014, 2014

Semantic Processing to Identify Adverse Drug Event Information from Black Box Warnings.
Proceedings of the AMIA 2014, 2014

2013
A methodology for extending domain coverage in SemRep.
Journal of Biomedical Informatics, 2013

Natural language processing: State of the art and prospects for significant progress, a workshop sponsored by the National Library of Medicine.
Journal of Biomedical Informatics, 2013

A graph-based recovery and decomposition of Swanson's hypothesis using semantic predications.
Journal of Biomedical Informatics, 2013

Extending SemRep to the public health domain.
JASIST, 2013

Clustering cliques for graph-based summarization of the biomedical research literature.
BMC Bioinformatics, 2013

Improve Retrieval Performance on Clinical Notes: A Comparison of Four Methods.
Proceedings of the 46th Hawaii International Conference on System Sciences, 2013

A Literature-Based Assessment of Concept Pairs as a Measure of Semantic Relatedness.
Proceedings of the AMIA 2013, 2013

Preliminary Evaluation of a Literature-based Discovery Method for Explaining Drug Adverse Effects.
Proceedings of the AMIA 2013, 2013

Semantic Processing to Identify Adverse Drug Event Information from Black Box Warnings.
Proceedings of the AMIA 2013, 2013

Semantic MEDLINE for Discovery Browsing: Using Semantic Predications and the Literature-Based Discovery Paradigm to Elucidate a Mechanism for the Obesity Paradox.
Proceedings of the AMIA 2013, 2013

2012
Discovering discovery patterns with predication-based Semantic Indexing.
Journal of Biomedical Informatics, 2012

SemMedDB: a PubMed-scale repository of biomedical semantic predications.
Bioinformatics, 2012

An Ensemble Approach for Expanding Queries.
Proceedings of The Twenty-First Text REtrieval Conference, 2012

Many Paths Lead to Discovery: Analogical Retrieval of Cancer Therapies.
Proceedings of the Quantum Interaction - 6th International Symposium, 2012

Discovery by scent: Discovery browsing system based on the Information Foraging Theory.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

Discovery at a distance: Farther journeys in predication space.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

Synonym, Topic Model and Predicate-Based Query Expansion for Retrieving Clinical Documents.
Proceedings of the AMIA 2012, 2012

Using SemRep to Label Semantic Relations Extracted from Clinical Text.
Proceedings of the AMIA 2012, 2012

Using Literature-based Discovery to Explain Drug Adverse Effects.
Proceedings of the AMIA 2012, 2012

2011
Degree centrality for semantic abstraction summarization of therapeutic studies.
Journal of Biomedical Informatics, 2011

Semantic MEDLINE: An advanced information management application for biomedicine.
Inf. Services and Use, 2011

Constructing a semantic predication gold standard from the biomedical literature.
BMC Bioinformatics, 2011

Finding Schizophrenia's Prozac Emergent Relational Similarity in Predication Space.
Proceedings of the Quantum Interaction - 5th International Symposium, 2011

2010
Adapting semantic natural language processing technology to address information overload in influenza epidemic management.
JASIST, 2010

Combining Relevance Assignment with Quality of the Evidence to Support Guideline Development.
Proceedings of the MEDINFO 2010, 2010

Arguments of Nominals in Semantic Interpretation of Biomedical Text.
Proceedings of the 2010 Workshop on Biomedical Natural Language Processing, 2010

Logical Leaps and Quantum Connectives: Forging Paths through Predication Space.
Proceedings of the Quantum Informatics for Cognitive, 2010

2009
Automatic summarization of MEDLINE citations for evidence-based medical treatment: A topic-oriented evaluation.
Journal of Biomedical Informatics, 2009

Viewpoint Paper: Towards Automatic Recognition of Scientifically Rigorous Clinical Research Evidence.
JAMIA, 2009

Semantic Relations for Interpreting DNA Microarray Data.
Proceedings of the AMIA 2009, 2009

Predication-based Semantic Indexing: Permutations as a Means to Encode Predications in Semantic Space.
Proceedings of the AMIA 2009, 2009

2008
Combining Semantic Relations and DNA Microarray Data for Novel Hypotheses Generation.
Proceedings of the Linking Literature, Information, and Knowledge for Biology, 2008

The Impact of Directionality in Predications on Text Mining.
Proceedings of the 41st Hawaii International International Conference on Systems Science (HICSS-41 2008), 2008

Toward Automatic Recognition of High Quality Clinical Evidence.
Proceedings of the AMIA 2008, 2008

Semantic Processing to Support Clinical Guideline Development.
Proceedings of the AMIA 2008, 2008

2007
Research Paper: Knowledge-based Methods to Help Clinicians Find Answers in MEDLINE.
JAMIA, 2007

Multiple Approaches to Fine-Grained Indexing of the Biomedical Literature.
Proceedings of the Biocomputing 2007, 2007

Extracting Semantic Predications from Medline Citations for Pharmacogenomics.
Proceedings of the Biocomputing 2007, 2007

Interpreting comparative constructions in biomedical text.
Proceedings of the Biological, translational, and clinical language processing, 2007

Leveraging Semantic Knowledge in IRB Databases to Improve Translation Science.
Proceedings of the AMIA 2007, 2007

Identifying Risk Factors for Metabolic Syndrome in Biomedical Text.
Proceedings of the AMIA 2007, 2007

Using the Literature-Based Discovery Paradigm to Investigate Drug Mechanisms.
Proceedings of the AMIA 2007, 2007

2006
The importance of the lexicon in tagging biological text.
Natural Language Engineering, 2006

Word sense disambiguation by selecting the best semantic type based on Journal Descriptor Indexing: Preliminary experiment.
JASIST, 2006

Semantic representation of consumer questions and physician answers.
I. J. Medical Informatics, 2006

Argument-predicate distance as a filter for enhancing precision in extracting predications on the genetic etiology of disease.
BMC Bioinformatics, 2006

Semantic Processing to Enhance Retrieval of Diagnosis Citations from Medline.
Proceedings of the AMIA 2006, 2006

Exploiting Semantic Relations for Literature-Based Discovery.
Proceedings of the AMIA 2006, 2006

Summarizing Drug Information in Medline Citations.
Proceedings of the AMIA 2006, 2006

2005
Effects of information and machine learning algorithms on word sense disambiguation with small datasets.
I. J. Medical Informatics, 2005

MedTag: A Collection of Biomedical Annotations.
Proceedings of the ACL-ISMB Workshop on Linking Biological Literature, 2005

Semantic characteristics of MEDLINE citations useful for therapeutic decision-making.
Proceedings of the AMIA 2005, 2005

Medical Facts to Support Inferencing in Natural Language Processing.
Proceedings of the AMIA 2005, 2005

Determining Prominent Subdomains in Medicine.
Proceedings of the AMIA 2005, 2005

2004
MedPost: a part-of-speech tagger for bioMedical text.
Bioinformatics, 2004

Using Symbolic Knowledge in the UMLS to Disambiguate Words in Small Datasets with a Naïve Bayes Classifier.
Proceedings of the MEDINFO 2004, 2004

Summarization of an Online Medical Encyclopedia.
Proceedings of the MEDINFO 2004, 2004

Identifying Respiratory Findings in Emergency Department Reports for Biosurveillance using MetaMap.
Proceedings of the MEDINFO 2004, 2004

2003
The interaction of domain knowledge and linguistic structure in natural language processing: interpreting hypernymic propositions in biomedical text.
Journal of Biomedical Informatics, 2003

Semantic Relations Asserting the Etiology of Genetic Diseases.
Proceedings of the AMIA 2003, 2003

Towards (Semi-)automatic Generation of Bio-medical ontologies.
Proceedings of the AMIA 2003, 2003

Interpreting Hypernymic Propositions in an Online Medical Encyclopedia.
Proceedings of the AMIA 2003, 2003

Integrating a Hypernymic Proposition Interpreter into a Semantic Processor for Biomedical Texts.
Proceedings of the AMIA 2003, 2003

2002
Assessing the consistency of a biomedical terminology through lexical knowledge.
I. J. Medical Informatics, 2002

Finding UMLS Metathesaurus concepts in MEDLINE.
Proceedings of the AMIA 2002, 2002

Exploring text mining from MEDLINE.
Proceedings of the AMIA 2002, 2002

Discovering protein similarity using natural language processing.
Proceedings of the AMIA 2002, 2002

NLP-based information extraction for managing the molecular biology literature.
Proceedings of the AMIA 2002, 2002

Unsupervised, corpus-based method for extending a biomedical terminology.
Proceedings of the ACL 2002 Workshop on Natural Language Processing in the Biomedical Domain, 2002

2000
Extracting Molecular Binding Relationships from Biomedical Text.
Proceedings of the 6th Applied Natural Language Processing Conference, 2000

Argument identification for arterial branching predications asserted in cardiac catheterization reports.
Proceedings of the AMIA 2000, 2000


1999
Hierarchical Concept Indexing of Full-Text Documents in the Unified Medical Language System® Information Sources Map.
JASIS, 1999

Mining molecular binding terminology from biomedical text.
Proceedings of the AMIA 1999, 1999

From Bibliography to Test Collection: Enhancing Topical Relevance Assessment for Bibliographic Information Retrieval System Evaluation.
Proceedings of the AMIA 1999, 1999

1998
Identification of anatomical terminology in medical text.
Proceedings of the AMIA 1998, 1998

Evaluating lexical variant generation to improve information retrieval.
Proceedings of the AMIA 1998, 1998

Automatic semantic interpretation of anatomic spatial relationships in clinical text.
Proceedings of the AMIA 1998, 1998

1997
Query expansion using the UMLS Metathesaurus.
Proceedings of the AMIA 1997, 1997

1988
Coordination in reconnaissance-attack parsing.
Proceedings of the 12th International Conference on Computational Linguistics, 1988

1986
Reconnaissance-Attack Parsing.
Proceedings of the 11th International Conference on Computational Linguistics, 1986


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