Patrick Ruch

According to our database1, Patrick Ruch authored at least 130 papers between 1999 and 2018.

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Bibliography

2018
PowerCool: Simulation of Cooling and Powering of 3D MPSoCs with Integrated Flow Cell Arrays.
IEEE Trans. Computers, 2018

Instance-based Learning for ICD10 Categorization.
Proceedings of the Working Notes of CLEF 2018, 2018

2017
Improving average ranking precision in user searches for biomedical research datasets.
CoRR, 2017

Global picture of OAI-PMH repositories through the analysis of 6 key open archive meta-catalogs.
CoRR, 2017

Improving average ranking precision in user searches for biomedical research datasets.
Database, 2017

Triage by ranking to support the curation of protein interactions.
Database, 2017

Customizing a Variant Annotation-Support Tool: an Inquiry into Probability Ranking Principles for TREC Precision Medicine.
Proceedings of The Twenty-Sixth Text REtrieval Conference, 2017

2016
neXtA5: accelerating annotation of articles via automated approaches in neXtProt.
Database, 2016

BiTeM at CLEF eHealth Evaluation Lab 2016 Task 2: Multilingual Information Extraction.
Proceedings of the Working Notes of CLEF 2016, 2016

Effect of the Named Entity Recognition and Sliding Window on the HONcode Automated Detection of HONcode Criteria for Mass Health Online Content.
Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2016), 2016

2015
From Cooling Integrated Circuits to Efficient Electrical Power Generation.
ERCIM News, 2015

Deep Question Answering for protein annotation.
Database, 2015

Exploiting incoming and outgoing citations for improving Information Retrieval in the TREC 2015 Clinical Decision Support Track.
Proceedings of The Twenty-Fourth Text REtrieval Conference, 2015

Instance-Based Learning for Tweet Monitoring and Categorization.
Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2015

2014
Development and tuning of an original search engine for patent libraries in medicinal chemistry.
BMC Bioinformatics, 2014

Overview of the gene ontology task at BioCreative IV.
Database, 2014

Closing the loop: from paper to protein annotation using supervised Gene Ontology classification.
Database, 2014

Full-texts representation with Medical Subject Headings, and co-citations network rerank- ing strategies for TREC 2014 Clinical Decision Support Track.
Proceedings of The Twenty-Third Text REtrieval Conference, 2014

Electronic Processing of Informed Consents in a Global Pharmaceutical Company Environment.
Proceedings of the e-Health - For Continuity of Care - Proceedings of MIE2014, the 25th European Medical Informatics Conference, Istanbul, Turkey, August 31, 2014

PowerCool: simulation of integrated microfluidic power generation in bright silicon MPSoCs.
Proceedings of the IEEE/ACM International Conference on Computer-Aided Design, 2014

Integrated microfluidic power generation and cooling for bright silicon MPSoCs.
Proceedings of the Design, Automation & Test in Europe Conference & Exhibition, 2014

Instance-based Learning for Tweet Categorization in CLEF RepLab 2014.
Proceedings of the Working Notes for CLEF 2014 Conference, 2014

2013
Application of text-mining for updating protein post-translational modification annotation in UniProtKB.
BMC Bioinformatics, 2013

Managing the data deluge: data-driven GO category assignment improves while complexity of functional annotation increases.
Database, 2013

Use of Controlled Vocabularies to Improve Biomedical Information Retrieval Tasks.
Proceedings of the MEDINFO 2013, 2013


Roadmap towards ultimately-efficient zeta-scale datacenters.
Proceedings of the International Conference on High Performance Computing & Simulation, 2013

Utilization of Ontology Look-Up Services in Information Retrieval for Biomedical Literature.
Proceedings of the Data and Knowledge for Medical Decision Support, 2013

Roadmap towards ultimately-efficient zeta-scale datacenters.
Proceedings of the Design, Automation and Test in Europe, 2013

Using a Question-Answering Approach in Machine Reading Task of Biomedical Texts about the Alzheimer Disease.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013

2012
Bionic Packaging: A Promising Paradigm for Future Computing.
ERCIM News, 2012

Using binary classification to prioritize and curate articles for the Comparative Toxicogenomics Database.
Database, 2012

Classification and Prioritization of Biomedical Literature for the Comparative Toxicogenomics Database.
Proceedings of the Quality of Life through Quality of Information, 2012

An advanced search engine for patent analytics in medicinal chemistry.
Proceedings of the Quality of Life through Quality of Information, 2012

Pathogens and Gene Product Normalization in the Biomedical Literature.
Proceedings of the Large Scale Projects in eHealth, 2012

A User-Friendly Tool for Medical-Related Patent Retrieval.
Proceedings of the Large Scale Projects in eHealth, 2012

BiTeM Site Report for the Claims to Passage Task in CLEF-IP 2012.
Proceedings of the CLEF 2012 Evaluation Labs and Workshop, 2012

2011
Toward five-dimensional scaling: How density improves efficiency in future computers.
IBM Journal of Research and Development, 2011

The gene normalization task in BioCreative III.
BMC Bioinformatics, 2011

BiTeM Group Report for TREC Medical Records Track 2011.
Proceedings of The Twentieth Text REtrieval Conference, 2011

BiTeM Group Report for TREC Chemical IR Track 2011.
Proceedings of The Twentieth Text REtrieval Conference, 2011

Interoperability Driven Integration of Biomedical Data Sources.
Proceedings of the User Centered Networked Health Care - Proceedings of MIE 2011, 2011

Using Multimodal Mining to Drive Clinical Guidelines Development.
Proceedings of the User Centered Networked Health Care - Proceedings of MIE 2011, 2011

2010
Literature-based Discovery.
JASIST, 2010

BiTeM site Report for TREC Chemistry 2010: Impact of Citations Feeback for Patent Prior Art Search and Chemical Compounds Expansion for Ad Hoc Retrieval.
Proceedings of The Nineteenth Text REtrieval Conference, 2010

Automatic IPC Encoding and Novelty Tracking for Effective Patent Mining.
Proceedings of the 8th NTCIR Workshop Meeting on Evaluation of Information Access Technologies: Information Retrieval, 2010

Automatic Prior Art Searching and Patent Encoding at CLEF-IP '10.
Proceedings of the CLEF 2010 LABs and Workshops, 2010

2009
Comparing a rule-based versus statistical system for automatic categorization of MEDLINE documents according to biomedical specialty.
JASIST, 2009

Report on the TREC 2009 Experiments: Chemical IR Track.
Proceedings of The Eighteenth Text REtrieval Conference, 2009

Biomedical Data Management: A Proposal Framework.
Proceedings of the Medical Informatics in a United and Healthy Europe - Proceedings of MIE 2009, The XXIInd International Congress of the European Federation for Medical Informatics, Sarajevo, Bosnia and Herzegovina, Agust 30, 2009

Automatic Medical Knowledge Acquisition Using Question-Answering.
Proceedings of the Medical Informatics in a United and Healthy Europe - Proceedings of MIE 2009, The XXIInd International Congress of the European Federation for Medical Informatics, Sarajevo, Bosnia and Herzegovina, Agust 30, 2009

Exploring a Wide Range of Simple Pre and Post Processing Strategies for Patent Searching in CLEF IP 2009.
Proceedings of the Working Notes for CLEF 2009 Workshop co-located with the 13th European Conference on Digital Libraries (ECDL 2009) , Corfù, Greece, September 30, 2009

Taking Benefit of Query and Document Expansion using MeSH Descriptors in Medical ImageCLEF 2009.
Proceedings of the Working Notes for CLEF 2009 Workshop co-located with the 13th European Conference on Digital Libraries (ECDL 2009) , Corfù, Greece, September 30, 2009

Simple Pre and Post Processing Strategies for Patent Searching in CLEF Intellectual Property Track 2009.
Proceedings of the Multilingual Information Access Evaluation I. Text Retrieval Experiments, 2009

QA-driven Guidelines Generation for Bacteriotherapy.
Proceedings of the AMIA 2009, 2009

2008
Automatic medical encoding with SNOMED categories.
BMC Med. Inf. & Decision Making, 2008

Mapping proteins to disease terminologies: from UniProt to MeSH.
BMC Bioinformatics, 2008

Gene Ontology density estimation and discourse analysis for automatic GeneRiF extraction.
BMC Bioinformatics, 2008

Text-only Cross-language Image Search at Medical ImageCLEF 2008.
Proceedings of the Working Notes for CLEF 2008 Workshop co-located with the 12th European Conference on Digital Libraries (ECDL 2008) , 2008

Query and Document Expansion with Medical Subject Headings Terms at Medical Imageclef 2008.
Proceedings of the Evaluating Systems for Multilingual and Multimodal Information Access, 2008

First Participation of University and Hospitals of Geneva to Domain-Specific Track in CLEF 2008.
Proceedings of the Working Notes for CLEF 2008 Workshop co-located with the 12th European Conference on Digital Libraries (ECDL 2008) , 2008

From Episodes of Care to Diagnosis Codes: Automatic Text Categorization for Medico-Economic Encoding.
Proceedings of the AMIA 2008, 2008

2007
Mapping protein information to disease terminologies.
J. Integrative Bioinformatics, 2007

Using argumentation to extract key sentences from biomedical abstracts.
I. J. Medical Informatics, 2007

Recherche d'information dans MEDLINE.
Document Numérique, 2007

Vocabulary-Driven Passage Retrieval for Question-Answering in Genomics.
Proceedings of The Sixteenth Text REtrieval Conference, 2007

Combining Resources to Find Answers to Biomedical Questions.
Proceedings of The Sixteenth Text REtrieval Conference, 2007

Using Discourse Analysis to Improve Text Categorization in MEDLINE.
Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

Design of a Decentralized Reusable Research Database Architecture to Support Data Acquisition in Large Research Projects.
Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

Challenges and Methodology for Indexing the Computerized Patient Record.
Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

Reconciliation of Ontology and Terminology to Cope with Linguistics.
Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

Recherche d'information et analyse bibliographique appliquées à la mise à jour automatique de Swiss-Prot.
Proceedings of the COnférence en Recherche d'Infomations et Applications, 2007

University and Hospitals of Geneva at ImageCLEF 2007.
Proceedings of the Working Notes for CLEF 2007 Workshop co-located with the 11th European Conference on Digital Libraries (ECDL 2007), 2007

University and Hospitals of Geneva Participating at ImageCLEF 2007.
Proceedings of the Advances in Multilingual and Multimodal Information Retrieval, 2007

Unsupervised Documents Categorization Using New Threshold-Sensitive Weighting Technique.
Proceedings of the Artificial Intelligence in Medicine, 2007

2006
Model Formulation: Advancing Biomedical Image Retrieval: Development and Analysis of a Test Collection.
JAMIA, 2006

Using argumentation to retrieve articles with similar citations: An inquiry into improving related articles search in the MEDLINE digital library.
I. J. Medical Informatics, 2006

Health search engine with e-document analysis for reliable search results.
I. J. Medical Informatics, 2006

Methodology to ease the construction of a terminology of problems.
I. J. Medical Informatics, 2006

Recent advances in natural language processing for biomedical applications.
I. J. Medical Informatics, 2006

Automatic assignment of biomedical categories: toward a generic approach.
Bioinformatics, 2006

Report on the TREC 2006 Experiment: Genomics Track.
Proceedings of the Fifteenth Text REtrieval Conference, 2006

Finding Relevant Passages in Scientific Articles: Fusion of Automatic Approaches vs. an Interactive Team Effort.
Proceedings of the Fifteenth Text REtrieval Conference, 2006

Dépister efficacement de l'information dans une banque documentaire : L'exemple de MEDLINE.
Proceedings of the Actes du XXIVème Congrès INFORSID, Hammamet, Tunisie, 31 mai, 2006

Query and Document Translation by Automatic Text Categorization: A Simple Approach to Establish a Strong Textual Baseline for ImageCLEFmed 2006.
Proceedings of the Working Notes for CLEF 2006 Workshop co-located with the 10th European Conference on Digital Libraries (ECDL 2006), 2006

Translation by Text Categorisation: Medical Image Retrieval in ImageCLEFmed 2006.
Proceedings of the Evaluation of Multilingual and Multi-modal Information Retrieval, 2006

Argumentative Feedback: A Linguistically-Motivated Term Expansion for Information Retrieval.
Proceedings of the ACL 2006, 2006

2005
UMLF: a unified medical lexicon for French.
I. J. Medical Informatics, 2005

Data-poor categorization and passage retrieval for Gene Ontology Annotation in Swiss-Prot.
BMC Bioinformatics, 2005

Report on the TREC 2005 Experiment: Genomics Track.
Proceedings of the Fourteenth Text REtrieval Conference, 2005

Fusion of Knowledge-Intensive and Statistical Approaches for Retrieving and Annotating Textual Genomics Documents.
Proceedings of the Fourteenth Text REtrieval Conference, 2005

Evaluation of Stemming, Query Expansion and Manual Indexing Approaches for the Genomic Task.
Proceedings of the Fourteenth Text REtrieval Conference, 2005

Extracting Key Sentences with Latent Argumentative Structuring.
Proceedings of the Connecting Medical Informatics and Bio-Informatics - Proceedings of MIE 2005, 2005

Model Selection for Support Vector Classifiers via Direct Simplex Search.
Proceedings of the Eighteenth International Florida Artificial Intelligence Research Society Conference, 2005

Features Combination for Extracting Gene Functions from MEDLINE.
Proceedings of the Advances in Information Retrieval, 2005

Using medGIFT and easyIR for the ImageCLEF 2005 Evaluation Tasks.
Proceedings of the Working Notes for CLEF 2005 Workshop co-located with the 9th European Conference on Digital Libraries (ECDL 2005), 2005

The Use of MedGIFT and EasyIR for ImageCLEF 2005.
Proceedings of the Accessing Multilingual Information Repositories, 2005

Latent Argumentative Pruning for Compact MEDLINE Indexing.
Proceedings of the Artificial Intelligence in Medicine, 2005

2004
An argumentative annotation schema for meeting discussions
CoRR, 2004

Report on the TREC 2004 Experiment: Genomics Track.
Proceedings of the Thirteenth Text REtrieval Conference, 2004

Coping with the Variability of Medical Terms.
Proceedings of the MEDINFO 2004, 2004

An Argumentative Annotation Schema for Meeting Discussions.
Proceedings of the Fourth International Conference on Language Resources and Evaluation, 2004

Query Translation by Text Categorization.
Proceedings of the COLING 2004, 2004

ImageCLEF 2004: Combining Image and Multi-lingual Search for Medical Image Retrieval.
Proceedings of the Multilingual Information Access for Text, 2004

Report on the CLEF Experiment: Combining Image and Multilingual Search for Medical Image Retrieval.
Proceedings of the Working Notes for CLEF 2004 Workshop co-located with the 8th European Conference on Digital Libraries (ECDL 2004), 2004

Report on the ImageCLEF Experiment: How to Visually Retrieve Images from the St. Andrews Collection using GIFT.
Proceedings of the Working Notes for CLEF 2004 Workshop co-located with the 8th European Conference on Digital Libraries (ECDL 2004), 2004

Using Argumentation to Retrieve Articles with Similar Citations from MEDLINE.
Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and its Applications, 2004

2003
Using lexical disambiguation and named-entity recognition to improve spelling correction in the electronic patient record.
Artificial Intelligence in Medicine, 2003

Report on the TREC 2003 Experiment: Genomic Track.
Proceedings of The Twelfth Text REtrieval Conference, 2003

Towards a Unified Medical Lexicon for French.
Proceedings of the New Navigators: from Professionals to Patients, 2003

A Frame-based Representation of ICD-10.
Proceedings of the New Navigators: from Professionals to Patients, 2003


Learning-Free Text Categorization.
Proceedings of the Artificial Intelligence in Medicine, 2003

2002
Evaluating and reducing the effect of data corruption when applying bag of words approaches to medical records.
I. J. Medical Informatics, 2002

The future of natural language processing for biomedical applications.
I. J. Medical Informatics, 2002

Information retrieval and spelling correction: an inquiry into lexical disambiguation.
Proceedings of the 2002 ACM Symposium on Applied Computing (SAC), 2002

Using Contextual Spelling Correction to Improve Retrieval Effectiveness in Degraded Text Collections.
Proceedings of the 19th International Conference on Computational Linguistics, 2002

Controlling the vocabulary for anatomy.
Proceedings of the AMIA 2002, 2002

2001
Toward filling the gap between interactive and fully-automatic spelling correction using the linguistic context.
Proceedings of the IEEE International Conference on Systems, 2001

Comparing General and Medical Texts for Information Retrieval Based on Natural Language Processing: An Inquiry into Lexical Disambiguation.
Proceedings of the MEDINFO 2001, 2001

Conceptual Search in Electronic Patient Record.
Proceedings of the MEDINFO 2001, 2001

Looking back or looking all around: comparing two spell checking strategies for documents edition in an electronic patient record.
Proceedings of the AMIA 2001, 2001

A light knowledge model for linguistic applications.
Proceedings of the AMIA 2001, 2001

Using Part-of-Speech and Word-Sense Disambiguation for Boosting String-Edit Distance Spelling Correction.
Proceedings of the Artificial Intelligence Medicine, 2001

2000
Minimal Commitment and Full Lexical Disambiguation: Balancing Rules and Hidden Markov Models.
Proceedings of the Fourth Conference on Computational Natural Language Learning, 2000

Medical document anonymization with a semantic lexicon.
Proceedings of the AMIA 2000, 2000

Semantic handling of medical compound words through sound analysis and generation processes.
Proceedings of the AMIA 2000, 2000

1999
MEDTAG: tag-like semantics for medical document indexing.
Proceedings of the AMIA 1999, 1999

Model-based semantic dictionaries for medical language understanding.
Proceedings of the AMIA 1999, 1999

The power and limits of a rule-based morpho-semantic parser.
Proceedings of the AMIA 1999, 1999


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