Pandemic Drugs at Pandemic Speed: Accelerating COVID-19 Drug Discovery with Hybrid Machine Learning- and Physics-based Simulations on High Performance Computers.

[BibT_eX]

[DOI]

CoRR, 2021

ExaWorks: Workflows for Exascale.

[BibT_eX]

[DOI]

Proceedings of the 2021 IEEE Workshop on Workflows in Support of Large-Scale Science (WORKS), 2021

Scalable HPC & AI infrastructure for COVID-19 therapeutics.

[BibT_eX]

[DOI]

Proceedings of the PASC '21: Platform for Advanced Scientific Computing Conference, 2021

IMPECCABLE: Integrated Modeling PipelinE for COVID Cure by Assessing Better LEads.

[BibT_eX]

[DOI]

Proceedings of the ICPP 2021: 50th International Conference on Parallel Processing, Lemont, IL, USA, August 9, 2021

2020

Scalable HPC and AI Infrastructure for COVID-19 Therapeutics.

[BibT_eX]

[DOI]

CoRR, 2020

2019

Middleware Building Blocks for Workflow Systems.

[BibT_eX]

[DOI]

Matteo Turilli

Vivek Balasubramanian

André Merzky

Ioannis Paraskevakos

Shantenu Jha

Comput. Sci. Eng., 2019

RADICAL-Cybertools: Middleware Building Blocks for Scalable Science.

[BibT_eX]

[DOI]

Vivek Balasubramanian

Shantenu Jha

André Merzky

Matteo Turilli

CoRR, 2019

Characterizing the Performance of Executing Many-tasks on Summit.

[BibT_eX]

[DOI]

Proceedings of the IEEE/ACM Third Annual Workshop on Emerging Parallel and Distributed Runtime Systems and Middleware, 2019

2018

Synapse: Synthetic application profiler and emulator.

[BibT_eX]

[DOI]

J. Comput. Sci., 2018

Towards General Distributed Resource Selection.

[BibT_eX]

[DOI]

CoRR, 2018

Design and Performance Characterization of RADICAL-Pilot on Titan.

[BibT_eX]

[DOI]

CoRR, 2018

Using Pilot Systems to Execute Many Task Workloads on Supercomputers.

[BibT_eX]

[DOI]

Proceedings of the Job Scheduling Strategies for Parallel Processing, 2018

Towards Exascale Computing for High Energy Physics: The ATLAS Experience at ORNL.

[BibT_eX]

[DOI]

Proceedings of the 14th IEEE International Conference on e-Science, 2018

Building Blocks for Workflow System Middleware.

[BibT_eX]

[DOI]

Matteo Turilli

André Merzky

Vivek Balasubramanian

Shantenu Jha

Proceedings of the 18th IEEE/ACM International Symposium on Cluster, 2018

2017

Evaluating Distributed Execution of Workloads.

[BibT_eX]

[DOI]

Proceedings of the 13th IEEE International Conference on e-Science, 2017

2016

Application Skeleton: Generating Synthetic Applications for Infrastructure Research.

[BibT_eX]

[DOI]

J. Open Source Softw., 2016

Application skeletons: Construction and use in eScience.

[BibT_eX]

[DOI]

Future Gener. Comput. Syst., 2016

Analysis of Distributed Execution of Workloads.

[BibT_eX]

[DOI]

CoRR, 2016

Integrating Abstractions to Enhance the Execution of Distributed Applications.

[BibT_eX]

[DOI]

Proceedings of the 2016 IEEE International Parallel and Distributed Processing Symposium, 2016

Synapse: Synthetic Application Profiler and Emulator.

[BibT_eX]

[DOI]

André Merzky

Shantenu Jha

Proceedings of the 2016 IEEE International Parallel and Distributed Processing Symposium Workshops, 2016

RepEx: A Flexible Framework for Scalable Replica Exchange Molecular Dynamics Simulations.

[BibT_eX]

[DOI]

Proceedings of the 45th International Conference on Parallel Processing, 2016

2015

RADICAL-Pilot: Scalable Execution of Heterogeneous and Dynamic Workloads on Supercomputers.

[BibT_eX]

[DOI]

CoRR, 2015

Synapse: Bridging the Gap Towards Predictable Workload Placement.

[BibT_eX]

[DOI]

André Merzky

Shantenu Jha

CoRR, 2015

2014

Towards Standardized Job Submission and Control in Infrastructure Clouds.

[BibT_eX]

[DOI]

Peter Tröger

André Merzky

J. Grid Comput., 2014

2012

Grid Computing: The Next Decade -- Report and Summary

[BibT_eX]

[DOI]

CoRR, 2012

The anatomy of successful ECSS projects: lessons of supporting high-throughput high-performance ensembles on XSEDE.

[BibT_eX]

[DOI]

Proceedings of the 1st Conference of the Extreme Science and Engineering Discovery Environment, 2012

Towards a common model for pilot-jobs.

[BibT_eX]

[DOI]

Proceedings of the 21st International Symposium on High-Performance Parallel and Distributed Computing, 2012

P∗: A model of pilot-abstractions.

[BibT_eX]

[DOI]

Proceedings of the 8th IEEE International Conference on E-Science, 2012

2011

Understanding application-level interoperability: Scaling-out MapReduce over high-performance grids and clouds.

[BibT_eX]

[DOI]

Future Gener. Comput. Syst., 2011

Towards high-throughput, high-performance computational estimation of binding affinities for patient specific HIV-1 protease sequences.

[BibT_eX]

[DOI]

Proceedings of the 2011 TeraGrid Conference - Extreme Digital Discovery, 2011

2010

What Is the Price of Simplicity? - A Cross-Platform Evaluation of the SAGA API.

[BibT_eX]

[DOI]

Proceedings of the Euro-Par 2010 - Parallel Processing, 16th International Euro-Par Conference, Ischia, Italy, August 31, 2010

2009

Using clouds to provide grids with higher levels of abstraction and explicit support for usage modes.

[BibT_eX]

[DOI]

Shantenu Jha

André Merzky

Geoffrey C. Fox

Concurr. Comput. Pract. Exp., 2009

Application Level Interoperability between Clouds and Grids.

[BibT_eX]

[DOI]

André Merzky

Katerina Stamou

Shantenu Jha

Proceedings of the Workshops at the Grid and Pervasive Computing Conference, 2009

A Fresh Perspective on Developing and Executing DAG-Based Distributed Applications: A Case-Study of SAGA-Based Montage.

[BibT_eX]

[DOI]

Proceedings of the Fifth International Conference on e-Science, 2009

Programming Abstractions for Data Intensive Computing on Clouds and Grids.

[BibT_eX]

[DOI]

Proceedings of the 9th IEEE/ACM International Symposium on Cluster Computing and the Grid, 2009

2008

Distributed Replica-Exchange Simulations on Production Environments Using SAGA and Migol.

[BibT_eX]

[DOI]

Proceedings of the Fourth International Conference on e-Science, 2008

2007

Grid Interoperability at the Application Level Using SAGA.

[BibT_eX]

[DOI]

Proceedings of the Third International Conference on e-Science and Grid Computing, 2007

GRID superscalar and job mapping on the reliable grid resources.

[BibT_eX]

[DOI]

Ani Anciaux-Sedrakian

Proceedings of the Making Grids Work: Proceedings of the CoreGRID Workshop on Programming Models Grid and P2P System Architecture Grid Systems, 2007

2006

Poster reception - The SAGA C++ reference implementation: a milestone toward new high-level grid applications.

[BibT_eX]

[DOI]

Proceedings of the ACM/IEEE SC2006 Conference on High Performance Networking and Computing, 2006

Seamless Integration of Generic Bulk Operations in Grid Applications.

[BibT_eX]

[DOI]

Proceedings of the On the Move to Meaningful Internet Systems 2006: OTM 2006 Workshops, 2006

Analysis of remote execution models for grid middleware.

[BibT_eX]

[DOI]

Proceedings of the 4th international workshop on Middleware for grid computing, 2006

Generic support for bulk operations in grid applications.

[BibT_eX]

[DOI]

Proceedings of the 4th international workshop on Middleware for grid computing, 2006

Versioning and Consistency in Replica Systems.

[BibT_eX]

[DOI]

Hartmut Kaiser

Kathrin Kirsch

André Merzky

Proceedings of the Frontiers of High Performance Computing and Networking, 2006

A Framework for Execution of Computational Chemistry Codes in Grid Environments.

[BibT_eX]

[DOI]

André Severo Pereira Gomes

André Merzky

Lucas Visscher

Proceedings of the Computational Science, 2006

2005

Progressive Retrieval and Hierarchical Visualization of Large Remote Data.

[BibT_eX]

[DOI]

Scalable Comput. Pract. Exp., 2005

The Grid Application Toolkit: Toward Generic and Easy Application Programming Interfaces for the Grid.

[BibT_eX]

[DOI]

Proc. IEEE, 2005

2004

Grid Application Programming Environments.

[BibT_eX]

[DOI]

Proceedings of the Future Generation Grids: Proceedings of the Workshop on Future Generation Grids, 2004

Remote partial file access using compact pattern descriptions.

[BibT_eX]

[DOI]

Proceedings of the 4th IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGrid 2004), 2004

2003

Enabling Applications on the Grid: A Gridlab Overview.

[BibT_eX]

[DOI]

Int. J. High Perform. Comput. Appl., 2003

2002

GridLab--a grid application toolkit and testbed.

[BibT_eX]

[DOI]

Future Gener. Comput. Syst., 2002

GridLab: Enabling Applications on the Grid.

[BibT_eX]

[DOI]

Proceedings of the Grid Computing, 2002

Meta- and Grid-Computing.

[BibT_eX]

[DOI]

Michel Cosnard

André Merzky

Proceedings of the Euro-Par 2002, 2002

Lösungsansätze zur Visualisierung im High Performance Computing und Networking Kontext.

[BibT_eX]

[DOI]

Proceedings of the Zukunft der Netze, 2002

2001

Cactus Tools for Grid Applications.

[BibT_eX]

[DOI]

Clust. Comput., 2001

Data Management for Grid Environments.

[BibT_eX]

[DOI]

Proceedings of the High-Performance Computing and Networking, 9th International Conference, 2001

Cactus Grid Computing: Review of Current Development.

[BibT_eX]

[DOI]

Proceedings of the Euro-Par 2001: Parallel Processing, 2001

Early Experiences with the EGrid Testbed.

[BibT_eX]

[DOI]

Proceedings of the First IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2001), 2001

2000

The Cactus Code: A Problem Solving Environment for the Grid.

[BibT_eX]

[DOI]

Proceedings of the Ninth IEEE International Symposium on High Performance Distributed Computing, 2000

1999

Solving Einstein's Equations on Supercomputers.

[BibT_eX]

[DOI]

Computer, 1999

André Merzky

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