Beifang Niu

Orcid: 0000-0002-7448-7793

According to our database1, Beifang Niu authored at least 27 papers between 2007 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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PhD thesis 
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Bibliography

2024
A comprehensive performance evaluation, comparison, and integration of computational methods for detecting and estimating cross-contamination of human samples in cancer next-generation sequencing analysis.
J. Biomed. Informatics, 2024

Peridynamic modeling for multiscale heat transport of phonon Boltzmann transport equation.
Comput. Phys. Commun., 2024

2023
OncoCTMiner: streamlining precision oncology trial matching via molecular profile analysis.
Database J. Biol. Databases Curation, 2023

Multi-class Cancer Classification of Whole Slide Images Through Transformer and Multiple Instance Learning.
Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023

2022
ACMViz: a visual analytics approach to understand DRL-based autonomous control model.
J. Vis., 2022

OncoPubMiner: a platform for mining oncology publications.
Briefings Bioinform., 2022

RabbitQCPlus: More Efficient Quality Control for Sequencing Data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021
Visual analysis of meteorological satellite data via model-agnostic meta-learning.
J. Vis., 2021

RabbitQC: high-speed scalable quality control for sequencing data.
Bioinform., 2021

Comprehensive review and evaluation of computational methods for identifying FLT3-internal tandem duplication in acute myeloid leukaemia.
Briefings Bioinform., 2021

Comprehensive fundamental somatic variant calling and quality management strategies for human cancer genomes.
Briefings Bioinform., 2021

MSIsensor-ct: microsatellite instability detection using cfDNA sequencing data.
Briefings Bioinform., 2021

2020
HotSpot3D web server: an integrated resource for mutation analysis in protein 3D structures.
Bioinform., 2020

Digital Currency Investment Strategy Framework Based on Ranking.
Proceedings of the Algorithms and Architectures for Parallel Processing, 2020

Change-Encryption: Encryption Using Spatiotemporal Information as a Function Model.
Proceedings of the 7th IEEE International Conference on Cyber Security and Cloud Computing, 2020

2019
Gclust: A Parallel Clustering Tool for Microbial Genomic Data.
Genom. Proteom. Bioinform., 2019

How Big Data and High-performance Computing Drive Brain Science.
Genom. Proteom. Bioinform., 2019

Distributed Parameter Optimization Scheduling Strategy and System Design Based on Mesos.
Proceedings of the 5th IEEE International Conference on Big Data Security on Cloud, 2019

DGCF: A Distributed Greedy Clustering Framework for Large-scale Genomic Sequences.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2014
MSIsensor: microsatellite instability detection using paired tumor-normal sequence data.
Bioinform., 2014

2013
MGAviewer: a desktop visualization tool for analysis of metagenomics alignment data.
Bioinform., 2013

2012
CD-HIT: accelerated for clustering the next-generation sequencing data.
Bioinform., 2012

Ultrafast clustering algorithms for metagenomic sequence analysis.
Briefings Bioinform., 2012

2011
FR-HIT, a very fast program to recruit metagenomic reads to homologous reference genomes.
Bioinform., 2011

2010
Artificial and natural duplicates in pyrosequencing reads of metagenomic data.
BMC Bioinform., 2010

CD-HIT Suite: a web server for clustering and comparing biological sequences.
Bioinform., 2010

2007
ScBioGrid: a commodity supercomputing environment supporting bioinformatics research.
Int. J. Comput. Math., 2007


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