Carito Guziolowski

According to our database, Carito Guziolowski authored at least 31 papers between 2006 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Predicting weighted unobserved nodes in a regulatory network using answer set programming.

Sophie Le Bars, Mathieu Bolteau, Jérémie Bourdon, Carito Guziolowski

BMC Bioinform., December, 2023

Inferring Boolean Networks from Single-Cell Human Embryo Datasets.

Mathieu Bolteau, Jérémie Bourdon, Laurent David, Carito Guziolowski

Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023

2021

Large-scale regulatory and signaling network assembly through linked open data.

Marie Lefebvre, Alban Gaignard, Maxime Folschette, Jérémie Bourdon, Carito Guziolowski

Database J. Biol. Databases Curation, 2021

2020

A pipeline to create predictive functional networks: application to the tumor progression of hepatocellular carcinoma.

Maxime Folschette, Vincent Legagneux, Arnaud Poret, Lokmane Chebouba, Carito Guziolowski, Nathalie Théret

BMC Bioinform., 2020

Comparing Probabilistic and Logic Programming Approaches to Predict the Effects of Enzymes in a Neurodegenerative Disease Model.

Sophie Le Bars, Jérémie Bourdon, Carito Guziolowski

Proceedings of the Computational Methods in Systems Biology, 2020

2019

Logic and Linear Programs to Understand Cancer Response.

Misbah Razzaq, Lokmane Chebouba, Pierre Le Jeune, Hanen Mhamdi, Carito Guziolowski, Jérémie Bourdon

Proceedings of the Automated Reasoning for Systems Biology and Medicine, 2019

2018

Computational discovery of dynamic cell line specific Boolean networks from multiplex time-course data.

Misbah Razzaq, Loïc Paulevé, Anne Siegel, Julio Saez-Rodriguez, Jérémie Bourdon, Carito Guziolowski

PLoS Comput. Biol., 2018

Proteomics Versus Clinical Data and Stochastic Local Search Based Feature Selection for Acute Myeloid Leukemia Patients' Classification.

Lokmane Chebouba, Dalila Boughaci, Carito Guziolowski

J. Medical Syst., 2018

Constraints on signaling network logic reveal functional subgraphs on Multiple Myeloma OMIC data.

Bertrand Miannay, Stéphane Minvielle, Florence Magrangeas, Carito Guziolowski

BMC Syst. Biol., 2018

Discriminate the response of Acute Myeloid Leukemia patients to treatment by using proteomics data and Answer Set Programming.

Lokmane Chebouba, Bertrand Miannay, Dalila Boughaci, Carito Guziolowski

BMC Bioinform., 2018

Computing Diverse Boolean Networks from Phosphoproteomic Time Series Data.

Misbah Razzaq, Roland Kaminski, Javier Romero, Torsten Schaub, Jérémie Bourdon, Carito Guziolowski

Proceedings of the Computational Methods in Systems Biology, 2018

2017

caspo: a toolbox for automated reasoning on the response of logical signaling networks families.

Santiago Videla, Julio Saez-Rodriguez, Carito Guziolowski, Anne Siegel

Bioinform., 2017

Identification of bifurcation transitions in biological regulatory networks using Answer-Set Programming.

Louis Fippo Fitime, Olivier F. Roux, Carito Guziolowski, Loïc Paulevé

Algorithms Mol. Biol., 2017

Constraints On Signaling Networks Logic Reveal Functional Subgraphs On Multiple Myeloma OMIC Data.

Bertrand Miannay, Stéphane Minvielle, Olivier Roux, Florence Magrangeas, Carito Guziolowski

Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

2016

Deciphering transcriptional regulations coordinating the response to environmental changes.

Vicente Acuña, Andrés Aravena, Carito Guziolowski, Damien Eveillard, Anne Siegel, Alejandro Maass

BMC Bioinform., 2016

Boolean network identification from perturbation time series data combining dynamics abstraction and logic programming.

Max Ostrowski, Loïc Paulevé, Torsten Schaub, Anne Siegel, Carito Guziolowski

Biosyst., 2016

2015

Learning Boolean logic models of signaling networks with ASP.

Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Martin Gebser, Jacques Nicolas, Julio Saez-Rodriguez, Torsten Schaub, Anne Siegel

Theor. Comput. Sci., 2015

Extended notions of sign consistency to relate experimental data to signaling and regulatory network topologies.

Sven Thiele, Luca Cerone, Julio Saez-Rodriguez, Anne Siegel, Carito Guziolowski, Steffen Klamt

BMC Bioinform., 2015

Integrating Time-Series Data in Large-Scale Discrete Cell-Based Models.

Louis Fippo Fitime, Christian Schuster, Peter Angel, Olivier Roux, Carito Guziolowski

Proceedings of the Hybrid Systems Biology - Fourth International Workshop, 2015

Boolean Network Identification from Multiplex Time Series Data.

Max Ostrowski, Loïc Paulevé, Torsten Schaub, Anne Siegel, Carito Guziolowski

Proceedings of the Computational Methods in Systems Biology, 2015

2013

Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming.

Carito Guziolowski, Santiago Videla, Federica Eduati, Sven Thiele, Thomas Cokelaer, Anne Siegel, Julio Saez-Rodriguez

Bioinform., 2013

2012

Revisiting the Training of Logic Models of Protein Signaling Networks with a Formal Approach based on Answer Set Programming

Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Niels Grabe, Julio Saez-Rodriguez, Anne Siegel

CoRR, 2012

Revisiting the Training of Logic Models of Protein Signaling Networks with ASP.

Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Niels Grabe, Julio Saez-Rodriguez, Anne Siegel

Proceedings of the Computational Methods in Systems Biology, 2012

2011

Designing Logical Rules to Model the Response of Biomolecular Networks with Complex Interactions: An Application to Cancer Modeling.

Carito Guziolowski, Sylvain Blachon, Tatiana Baumuratova, Gautier Stoll, Ovidiu Radulescu, Anne Siegel

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

2010

Analysis of Large-Scale Biological Networks with Constraint-Based Approaches over Static Models.

Carito Guziolowski

PhD thesis, 2010

Repair and Prediction (under Inconsistency) in Large Biological Networks with Answer Set Programming.

Martin Gebser, Carito Guziolowski, Mihail Ivanchev, Torsten Schaub, Anne Siegel, Sven Thiele, Philippe Veber

Proceedings of the Principles of Knowledge Representation and Reasoning: Proceedings of the Twelfth International Conference, 2010

2009

Method for Relating Inter-patient Gene Copy Numbers Variations with Gene Expression via Gene Influence Networks.

Sylvain Blachon, Gautier Stoll, Carito Guziolowski, Andrei Yu. Zinovyev, Emmanuel Barillot, Anne Siegel, Ovidiu Radulescu

Proceedings of the Workshops of the 5th IFIP Conference on Artificial Intelligence Applications & Innovations (AIAI-2009), 2009

2008

Inferring the role of transcription factors in regulatory networks.

Philippe Veber, Carito Guziolowski, Michel Le Borgne, Ovidiu Radulescu, Anne Siegel

BMC Bioinform., 2008

Curating a Large-Scale Regulatory Network by Evaluating Its Consistency with Expression Datasets.

Carito Guziolowski, Jeremy Gruel, Ovidiu Radulescu, Anne Siegel

Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2008

2007

Mapping sequences by parts.

Gilles Didier, Carito Guziolowski

Algorithms Mol. Biol., 2007

2006

JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow.

Mariano Latorre, Herman Silva, Juan Saba, Carito Guziolowski, Paula Vizoso, Veronica Martinez, Jonathan Maldonado, Andrea Morales, Rodrigo Caroca, Veronica Cambiazo, Reinaldo Campos-Vargas, Mauricio Gonzalez, Ariel Orellana, Julio Retamales, Lee A. Meisel

BMC Bioinform., 2006