Daniel R. Harris

According to our database, Daniel R. Harris authored at least 27 papers between 2010 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C).

Sijia Liu, Andrew Wen, Liwei Wang, Huan He, Sunyang Fu, Robert T. Miller, Andrew E. Williams, Daniel R. Harris, Ramakanth Kavuluru, Mei Liu, Noor Abu-El-Rub, Dalton Schutte, Rui Zhang, Masoud Rouhizadeh, John D. Osborne, Yongqun He, Umit Topaloglu, Stephanie S. Hong, Joel H. Saltz, Thomas Schaffter, Emily R. Pfaff, Christopher G. Chute, Tim Duong, Melissa A. Haendel, Rafael Fuentes, Peter Szolovits, Hua Xu, Hongfang Liu

J. Am. Medical Informatics Assoc., November, 2023

2022

geoPIPE: Geospatial Pipeline for Enhancing Open Data for Substance Use Disorders Research.

Daniel R. Harris, Nick Anthony, Mojde Mir, Chris Delcher

Proceedings of the AMIA 2022, 2022

2021

An Open Natural Language Processing Development Framework for EHR-based Clinical Research: A case demonstration using the National COVID Cohort Collaborative (N3C).

Sijia Liu, Andrew Wen, Liwei Wang, Huan He, Sunyang Fu, Robert T. Miller, Andrew E. Williams, Daniel R. Harris, Ramakanth Kavuluru, Mei Liu, Noor Abu-El-Rub, Rui Zhang, John D. Osborne, Masoud Rouhizadeh, Yongqun He, Emily R. Pfaff, Christopher G. Chute, Tim Duong, Melissa A. Haendel, Rafael Fuentes, Peter Szolovits, Hua Xu, Hongfang Liu

CoRR, 2021

Extracting Semantics from Census-based Reference Data.

Daniel R. Harris, Nima Seyedtalebi

Proceedings of the 15th IEEE International Conference on Semantic Computing, 2021

Integrating Medical and Dental Histories for Translational Science.

Darren W. Henderson, Malini S. Kirakodu, James R. Aaron, Tamela J. Harper, Daniel R. Harris, Jeffery C. Talbert, Luciana M. Shaddox

Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

Generalizing Dynamic Dashboards for Community-Engaged Interventions.

Daniel R. Harris, Daniel Redmond, Jeffery C. Talbert

Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020

Challenges and Barriers in Applying Natural Language Processing to Medical Examiner Notes from Fatal Opioid Poisoning Cases.

Daniel R. Harris, Christian Eisinger, Yanning Wang, Chris Delcher

Proceedings of the 2020 IEEE International Conference on Big Data (IEEE BigData 2020), 2020

Leveraging Differential Privacy in Geospatial Analyses of Standardized Healthcare Data.

Daniel R. Harris

Proceedings of the 2020 IEEE International Conference on Big Data (IEEE BigData 2020), 2020

Improving the Utility of Tobacco-Related Problem List Entries Using Natural Language Processing.

Daniel R. Harris, Darren W. Henderson, Alexandria Corbeau

Proceedings of the AMIA 2020, 2020

2019

bench4gis: Benchmarking Privacy-aware Geocoding with Open Big Data.

Daniel R. Harris, Chris Delcher

Proceedings of the 2019 IEEE International Conference on Big Data (IEEE BigData), 2019

2018

Retrospective analysis of health claims to evaluate pharmacotherapies with potential for repurposing: Association of bupropion and stimulant use disorder remission.

Emily R. Hankosky, Heather M. Bush, Linda P. Dwoskin, Daniel R. Harris, Darren W. Henderson, Guo-Qiang Zhang, Patricia R. Freeman, Jeffery C. Talbert

Proceedings of the AMIA 2018, 2018

2017

Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics: Burns, TN, USA. April 21-23, 2017.

Eric C. Rouchka, Julia H. Chariker, David Tieri, Juw Won Park, Shreedharkumar D. Rajurkar, Vikas Singh, Nishchal K. Verma, Yan Cui, Mark L. Farman, Bradford Condon, Neil Moore, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Daniel R. Harris, Patrick Calie, Eun Kyong Shin, Robert L. Davis, Arash Shaban-Nejad, Joshua M. Mitchell, Robert M. Flight, Qing Jun Wang, Richard M. Higashi, Teresa W.-M. Fan, Andrew N. Lane, Hunter N. B. Moseley, Liangqun Lu, Bernie J. Daigle, Xi Chen, Andrey Smelter, Li Chen, Bailey K. Phan, Nathaniel J. Serpico, Ethan G. Toney, Caroline E. Melton, Jennifer R. Mandel, Bernie J. Daigle Jr., Hao Chen, Kazi I. Zaman, Ramin Homayouni, Patrick J. Trainor, Samantha M. Carlisle, Andrew P. DeFilippis, Shesh N. Rai

BMC Bioinform., September, 2017

Rapid and Reusable Text Visualization and Exploration Development with DELVE.

Daniel R. Harris, Ramakanth Kavuluru, Jerzy W. Jaromczyk, Todd R. Johnson

Proceedings of the Summit on Clinical Research Informatics, 2017

Using closure tables to enable cross-querying of ontologies in database-driven applications.

Daniel R. Harris, Darren W. Henderson, Jeffery C. Talbert

Proceedings of the 2017 IEEE EMBS International Conference on Biomedical & Health Informatics, 2017

2016

Foundations of reusable and interoperable facet models using category theory.

Daniel R. Harris

Inf. Syst. Frontiers, 2016

Modeling Integration and Reuse of Heterogeneous Terminologies in Faceted Browsing Systems.

Daniel R. Harris

Proceedings of the 17th IEEE International Conference on Information Reuse and Integration, 2016

Using i2b2 to bootstrap rural health analytics and learning networks.

Daniel R. Harris, Adam D. Baus, Tamela J. Harper, Traci D. Jarrett, Cecil R. Pollard, Jeffery C. Talbert

Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016

i2b2t2: Unlocking Visualization for Clinical Research.

Daniel R. Harris, Darren W. Henderson

Proceedings of the Summit on Clinical Research Informatics, 2016

Informatics-based challenges of building collaborative healthcare research and analysis networks from rural community health centers.

Daniel R. Harris, Tamela J. Harper, Darren W. Henderson, Keith W. Henry, Jeffery C. Talbert

Proceedings of the 2016 IEEE-EMBS International Conference on Biomedical and Health Informatics, 2016

2015

Modeling Faceted Browsing with Category Theory to Support Interoperability and Reuse.

Daniel R. Harris

Proceedings of the 15th ACM/IEEE-CE Joint Conference on Digital Libraries, 2015

Modeling Reusable and Interoperable Faceted Browsing Systems with Category Theory.

Daniel R. Harris

Proceedings of the 2015 IEEE International Conference on Information Reuse and Integration, 2015

2014

Using Common Table Expressions to Build a Scalable Boolean Query Generator for Clinical Data Warehouses.

Daniel R. Harris, Darren W. Henderson, Ramakanth Kavuluru, Arnold J. Stromberg, Todd R. Johnson

IEEE J. Biomed. Health Informatics, 2014

An adaptive landscape for training in the essentials of next gen sequencing data acquisition and bioinformatic analysis.

Mark L. Farman, Patrick Calie, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Neil Moore, Daniel R. Harris, Christopher L. Schardl

BMC Bioinform., 2014

2013

Unsupervised Extraction of Diagnosis Codes from EMRs Using Knowledge-Based and Extractive Text Summarization Techniques.

Ramakanth Kavuluru, Sifei Han, Daniel R. Harris

Proceedings of the Advances in Artificial Intelligence, 2013

2012

A Knowledge-Based Approach to Syntactic Disambiguation of Biomedical Noun Compounds.

Ramakanth Kavuluru, Daniel R. Harris

Proceedings of the COLING 2012, 2012

Improving Scalability and Performance of i2b2 Query Processing Using Common Table Expressions.

Darren W. Henderson, Daniel R. Harris, Ramakanth Kavuluru, Todd R. Johnson

Proceedings of the AMIA 2012, 2012

2010

Experimenting with database segmentation size vs time performance for mpiBLAST on an IBM HS21 blade cluster.

Daniel R. Harris, Jerzy W. Jaromczyk, Christopher L. Schardl

BMC Bioinform., 2010