Declan G. Bates

Orcid: 0000-0003-1395-9846

According to our database1, Declan G. Bates authored at least 70 papers between 2001 and 2023.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Bibliography

2023
Natural Host Feedback Simplifies the Design of Metabolic Switches.
Proceedings of the 62nd IEEE Conference on Decision and Control, 2023

2022
gcFront: a tool for determining a Pareto front of growth-coupled cell factory designs.
Bioinform., 2022

Performance and robustness analysis of control strategies for ameliorating cellular host-circuit interactions.
Proceedings of the European Control Conference, 2022

Why Reduced Inspiratory Pressure Could Determine Success of Non-Invasive Ventilation in Acute Hypoxic Respiratory Failure.
Proceedings of the 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2022

A computational cardiopulmonary physiology simulator accurately predicts individual patient responses to changes in mechanical ventilator settings.
Proceedings of the 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2022

2021
Identification of an optimal CPR chest compression protocol.
Proceedings of the 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2021

2020
A simplified modelling framework facilitates more complex representations of plant circadian clocks.
PLoS Comput. Biol., 2020

A mechanistic model of the BLADE platform predicts performance characteristics of 256 different synthetic DNA recombination circuits.
PLoS Comput. Biol., 2020

On the stability of nucleic acid feedback control systems.
Autom., 2020

2019
Modelling and Control of Gene Regulatory Networks for Perturbation Mitigation.
IEEE ACM Trans. Comput. Biol. Bioinform., 2019

PID and State Feedback Controllers Using DNA Strand Displacement Reactions.
IEEE Control. Syst. Lett., 2019

Robustness Analysis of a Synthetic Translational Resource Allocation Controller.
IEEE Control. Syst. Lett., 2019

Efficacy of continuous positive airway pressure in casualties suffering from primary blast lung injury: A modeling study.
Proceedings of the 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2019

High oxygen fraction during airway opening is key to effective airway rescue in obese subjects.
Proceedings of the 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2019

Combining transcriptional and translational resource allocation controllers for synthetic circuits.
Proceedings of the 58th IEEE Conference on Decision and Control, 2019

2018
On the stability of nucleic acid feedback controllers.
CoRR, 2018

Uncertainty Modelling and Stability Robustness Analysis of Nucleic Acid-Based Feedback Control Systems.
Proceedings of the 57th IEEE Conference on Decision and Control, 2018

On the design of integral translational resource allocation controllers for synthetic cellular circuitry.
Proceedings of the 57th IEEE Conference on Decision and Control, 2018

2017
Design of an embedded inverse-feedforward biomolecular tracking controller for enzymatic reaction processes.
Comput. Chem. Eng., 2017

System identification of gene regulatory networks for perturbation mitigation via feedback control.
Proceedings of the 14th IEEE International Conference on Networking, Sensing and Control, 2017

Development and validation of a computational simulator for pediatric acute respiratory distress syndrome patients.
Proceedings of the 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2017

Investigating the effect of cardiac oscillations and deadspace gas mixing during apnea using computer simulation.
Proceedings of the 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2017

2016
Mechanistic Modeling of a Rewritable Recombinase Addressable Data Module.
IEEE Trans. Biomed. Circuits Syst., 2016

Biomolecular implementation of nonlinear system theoretic operators.
Proceedings of the 15th European Control Conference, 2016

Biologically inspired design of feedback control systems implemented using DNA strand displacement reactions.
Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016

Host-aware modelling of a synthetic genetic oscillator.
Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016

Creating virtual ARDS patients.
Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016

Robustness analysis of DNA-based biomolecular feedback controllers to parametric and time delay uncertainties.
Proceedings of the IEEE Biomedical Circuits and Systems Conference, 2016

Development and experimental validation of a mechanistic model of a recombinase-based temporal logic gate.
Proceedings of the IEEE Biomedical Circuits and Systems Conference, 2016

2015
Biomolecular implementation of a quasi sliding mode feedback controller based on DNA strand displacement reactions.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

Development and experimental validation of a mechanistic model of in vitro DNA recombination.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

Retroactivity analysis of a chemical reaction network module for the subtraction of molecular fluxes.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

Development of an integrated model of cardiovascular and pulmonary physiology for the evaluation of mechanical ventilation strategies.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

2013
Optimization of Mechanical Ventilator Settings for Pulmonary Disease States.
IEEE Trans. Biomed. Eng., 2013

Validation of a model of the GAL regulatory system via robustness analysis of its bistability characteristics.
BMC Syst. Biol., 2013

2012
Structural Bistability of the GAL Regulatory Network and Characterization of its Domains of Attraction.
J. Comput. Biol., 2012

Worst Case Analysis of a Launcher Vehicle Using Surrogate Models.
Proceedings of the 7th IFAC Symposium on Robust Control Design, 2012

Robust Safety Margin Assessment and Constrained Worst-Case Analysis of a Launcher Vehicle.
Proceedings of the 7th IFAC Symposium on Robust Control Design, 2012

On the role of ultrasensitivity in biomolecular control systems.
Proceedings of the 51th IEEE Conference on Decision and Control, 2012

2011
Computational modelling elucidates the mechanism of ciliary regulation in health and disease.
BMC Syst. Biol., 2011

Reverse-engineering biological interaction networks from noisy data using Regularized Least Squares and Instrumental Variables.
Proceedings of the 50th IEEE Conference on Decision and Control and European Control Conference, 2011

LFT-free μ-analysis of LTI/LPTV systems.
Proceedings of the 2011 IEEE International Symposium on Computer-Aided Control System Design, 2011

2008
Evaluation of Stochastic Effects on Biomolecular Networks Using the Generalized Nyquist Stability Criterion.
IEEE Trans. Autom. Control., 2008

Elucidating the mechanisms of cooperative calcium-calmodulin interactions: a structural systems biology approach.
BMC Syst. Biol., 2008

Linear time-varying models can reveal non-linear interactions of biomolecular regulatory networks using multiple time-series data.
Bioinform., 2008

Development and validation of an aero-engine simulation model for advanced controller design.
Proceedings of the American Control Conference, 2008

2007
Stochastic Noise and Synchronisation during <i>Dictyostelium</i> Aggregation Make cAMP Oscillations Robust.
PLoS Comput. Biol., 2007

Mathematical modelling of multi-site protein-ligand interactions.
BMC Syst. Biol., 2007

Least-squares methods for identifying biochemical regulatory networks from noisy measurements.
BMC Bioinform., 2007

A symbolic matrix decomposition algorithm for reduced order linear fractional transformation modelling.
Autom., 2007

Deterministic versus evolutionary optimisation methods for nonlinear robustness analysis of flight control laws.
Proceedings of the IEEE Congress on Evolutionary Computation, 2007

On the robustness analysis of nonlinear systems subject to time-invariant and/or time-varying uncertainty.
Proceedings of the IEEE Congress on Evolutionary Computation, 2007

Linear vs. Nonlinear Robustness Analysis: A Case Study.
Proceedings of the IEEE International Conference on Control Applications, 2007

2006
Clearance of Nonlinear Flight Control Laws Using Hybrid Evolutionary Optimization.
IEEE Trans. Evol. Comput., 2006

Robustness analysis of linear periodic time-varying systems subject to structured uncertainty.
Syst. Control. Lett., 2006

Nonlinear robust performance analysis using complex-step gradient approximation.
Autom., 2006

General Anti-windup synthesis for input constrained nonlinear systems controlled using nonlinear dynamic inversion.
Proceedings of the 45th IEEE Conference on Decision and Control, 2006

A deterministic hybrid optimisation algorithm for nonlinear flight control systems analysis.
Proceedings of the American Control Conference, 2006

2005
Hybrid Evolutionary Optimisation Methods for the Clearance of Nonlinear Flight Control Laws.
Proceedings of the 44th IEEE IEEE Conference on Decision and Control and 8th European Control Conference Control, 2005

Control oriented uncertainty modelling using μ sensitivities and skewed μ analysis tools.
Proceedings of the 44th IEEE IEEE Conference on Decision and Control and 8th European Control Conference Control, 2005

Robustness Analysis of Biochemical Networks using μ-Analysis and Hybrid Optimisation.
Proceedings of the 44th IEEE IEEE Conference on Decision and Control and 8th European Control Conference Control, 2005

Nonlinear Robust Performance Analysis using Gradient-Based Optimisation - An Aeroelastic Case-Study.
Proceedings of the 44th IEEE IEEE Conference on Decision and Control and 8th European Control Conference Control, 2005

2004
μ-Tools for the clearance of flight control laws.
Proceedings of the 2004 American Control Conference, 2004

2003
Improved computation of mixed μ bounds for flight control law analysis.
Proceedings of the 7th European Control Conference, 2003

Clearance of the VAAC Harrier CL002 flight control law using μ-analysis techniques.
Proceedings of the 7th European Control Conference, 2003

2002
Scheduling of a partitioned IFPC design for a VSTOL aircraft.
Proceedings of the American Control Conference, 2002

2001
A conditioning strategy for performance improvement of an integrated flight and propulsion control system for a V/STOL aircraft.
Proceedings of the 6th European Control Conference, 2001

New algorithms for upper and lower bounds on the mixed/real structured singular value.
Proceedings of the 6th European Control Conference, 2001

Robustness analysis of integrated flight and propulsion control systems for V/STOL aircraft.
Proceedings of the 6th European Control Conference, 2001

H∞, optimisation for L1 performance objectives.
Proceedings of the 6th European Control Conference, 2001


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