Guy-Bart Stan

Bioinform., December, 2023

Latent Diffusion Model for DNA Sequence Generation.

[BibT_eX]

[DOI]

Zehui Li

Yuhao Ni

Tim August B. Huygelen

CoRR, 2023

Genomic Interpreter: A Hierarchical Genomic Deep Neural Network with 1D Shifted Window Transformer.

[BibT_eX]

[DOI]

Zehui Li

Akashaditya Das

William A. V. Beardall

Yiren Zhao

CoRR, 2023

Hybrid Graph: A Unified Graph Representation with Datasets and Benchmarks for Complex Graphs.

[BibT_eX]

[DOI]

CoRR, 2023

Exploiting Resource Constraints for Controlling Biomolecular Circuits.

[BibT_eX]

[DOI]

Abhilash Patel

Proceedings of the 62nd IEEE Conference on Decision and Control, 2023

2022

Robust set-point regulation of gene expression using resource competition couplings in mammalian cells.

[BibT_eX]

[DOI]

Giansimone Perrino

Proceedings of the American Control Conference, 2022

2021

Stationary Distributions of Continuous-Time Markov Chains: A Review of Theory and Truncation-Based Approximations.

[BibT_eX]

[DOI]

SIAM Rev., 2021

Approximations of Countably Infinite Linear Programs over Bounded Measure Spaces.

[BibT_eX]

[DOI]

SIAM J. Optim., 2021

Synthetic biology open language visual (SBOL Visual) version 2.3.

[BibT_eX]

[DOI]

J. Integr. Bioinform., 2021

2020

Synthetic biology open language visual (SBOL visual) version 2.2.

[BibT_eX]

[DOI]

J. Integr. Bioinform., 2020

2019

The Exit Time Finite State Projection Scheme: Bounding Exit Distributions and Occupation Measures of Continuous-Time Markov Chains.

[BibT_eX]

[DOI]

SIAM J. Sci. Comput., 2019

Synthetic Biology Open Language Visual (SBOL Visual) Version 2.1.

[BibT_eX]

[DOI]

J. Integr. Bioinform., 2019

An Automatic Sparse Model Estimation Method Guided by Constraints That Encode System Properties.

[BibT_eX]

[DOI]

Zoltán A. Tuza

Proceedings of the 17th European Control Conference, 2019

2018

Identification of Nonlinear State-Space Systems From Heterogeneous Datasets.

[BibT_eX]

[DOI]

IEEE Trans. Control. Netw. Syst., 2018

Synthetic Biology Open Language Visual (SBOL Visual) Version 2.0.

[BibT_eX]

[DOI]

J. Integr. Bioinform., 2018

Global Network Prediction from Local Node Dynamics.

[BibT_eX]

[DOI]

CoRR, 2018

Characterization of Biologically Relevant Network Structures form Time-series Data.

[BibT_eX]

[DOI]

Zoltán A. Tuza

Proceedings of the 57th IEEE Conference on Decision and Control, 2018

2017

A Minimal Realization Technique for the Dynamical Structure Function of a Class of LTI Systems.

[BibT_eX]

[DOI]

IEEE Trans. Control. Netw. Syst., 2017

2016

A Sparse Bayesian Approach to the Identification of Nonlinear State-Space Systems.

[BibT_eX]

[DOI]

IEEE Trans. Autom. Control., 2016

Bounding Stationary Averages of Polynomial Diffusions via Semidefinite Programming.

[BibT_eX]

[DOI]

SIAM J. Sci. Comput., 2016

Shaping pulses to control bistable systems: Analysis, computation and counterexamples.

[BibT_eX]

[DOI]

Autom., 2016

Biomolecular implementation of nonlinear system theoretic operators.

[BibT_eX]

[DOI]

Proceedings of the 15th European Control Conference, 2016

Online model selection for synthetic gene networks.

[BibT_eX]

[DOI]

Wei Pan

Filippo Menolascina

Proceedings of the 55th IEEE Conference on Decision and Control, 2016

2015

Online fault diagnosis for nonlinear power systems.

[BibT_eX]

[DOI]

Autom., 2015

Identifying biochemical reaction networks from heterogeneous datasets.

[BibT_eX]

[DOI]

Proceedings of the 54th IEEE Conference on Decision and Control, 2015

Shaping pulses to control bistable biological systems.

[BibT_eX]

[DOI]

Proceedings of the American Control Conference, 2015

2014

Shaping Pulses to Control Multi-Stable Biological Systems.

[BibT_eX]

[DOI]

CoRR, 2014

Distributed Reconstruction of Nonlinear Networks: An ADMM Approach.

[BibT_eX]

[DOI]

Wei Pan

Aivar Sootla

CoRR, 2014

Modelling essential interactions between synthetic genes and their chassis cell.

[BibT_eX]

[DOI]

Rhys J. R. Algar

Tom Ellis

Proceedings of the 53rd IEEE Conference on Decision and Control, 2014

2013

Toggling a Genetic Switch Using Reinforcement Learning

[BibT_eX]

[DOI]

CoRR, 2013

Decentralised minimum-time consensus.

[BibT_eX]

[DOI]

Autom., 2013

Control of protein concentrations in heterogeneous cell populations.

[BibT_eX]

[DOI]

Proceedings of the 12th European Control Conference, 2013

Stochastic simulation of enzymatic reactions under transcriptional feedback regulation.

[BibT_eX]

[DOI]

Jean-Baptiste Lugagne

Diego A. Oyarzún

Proceedings of the 12th European Control Conference, 2013

On periodic reference tracking using batch-mode reinforcement learning with application to gene regulatory network control.

[BibT_eX]

[DOI]

Proceedings of the 52nd IEEE Conference on Decision and Control, 2013

Real-time fault diagnosis for large-scale nonlinear power networks.

[BibT_eX]

[DOI]

Proceedings of the 52nd IEEE Conference on Decision and Control, 2013

2012

Global State Synchronization in Networks of Cyclic Feedback Systems.

[BibT_eX]

[DOI]

IEEE Trans. Autom. Control., 2012

Arterial reservoir-excess pressure and ventricular work.

[BibT_eX]

[DOI]

Kim H. Parker

Jordi Alastruey

Medical Biol. Eng. Comput., 2012

Minimal realization of the dynamical structure function and its application to network reconstruction

[BibT_eX]

[DOI]

CoRR, 2012

Reconstruction of Arbitrary Biochemical Reaction Networks: A Compressive Sensing Approach

[BibT_eX]

[DOI]

Wei Pan

Ye Yuan

CoRR, 2012

Reconstruction of arbitrary biochemical reaction networks: A compressive sensing approach.

[BibT_eX]

[DOI]

Proceedings of the 51th IEEE Conference on Decision and Control, 2012

Design constraints in an operon circuit for engineered control of metabolic networks.

[BibT_eX]

[DOI]

Diego A. Oyarzún

Proceedings of the 51th IEEE Conference on Decision and Control, 2012

Dynamical structure function identifiability conditions enabling signal structure reconstruction.

[BibT_eX]

[DOI]

Proceedings of the 51th IEEE Conference on Decision and Control, 2012

Design tradeoffs in a synthetic gene control circuit for metabolic networks.

[BibT_eX]

[DOI]

Diego A. Oyarzún

Proceedings of the American Control Conference, 2012

2011

Fast Consensus Via Predictive Pinning Control.

[BibT_eX]

[DOI]

Hai-Tao Zhang

Michael Z. Q. Chen

IEEE Trans. Circuits Syst. I Regul. Pap., 2011

Robust dynamical network structure reconstruction.

[BibT_eX]

[DOI]

Autom., 2011

Decentralised minimal-time consensus.

[BibT_eX]

[DOI]

Proceedings of the 50th IEEE Conference on Decision and Control and European Control Conference, 2011

Networks of passive oscillators.

[BibT_eX]

[DOI]

Vishwesh V. Kulkarni

Marc D. Riedel

Proceedings of the 49th Annual Allerton Conference on Communication, 2011

2010

Robust dynamical network reconstruction.

[BibT_eX]

[DOI]

Proceedings of the 49th IEEE Conference on Decision and Control, 2010

Constructive synchronization of networked feedback systems.

[BibT_eX]

[DOI]

Proceedings of the 49th IEEE Conference on Decision and Control, 2010

2009

Minimal dynamical structure realisations with application to network reconstruction from data.

[BibT_eX]

[DOI]

Ye Yuan

Guy-Bart Vincent Stan

Sean Warnick

Proceedings of the 48th IEEE Conference on Decision and Control, 2009

Decentralised final value theorem for discrete-time LTI systems with application to minimal-time distributed consensus.

[BibT_eX]

[DOI]

Ye Yuan

Guy-Bart Vincent Stan

Ling Shi

Proceedings of the 48th IEEE Conference on Decision and Control, 2009

2008

Dynamical structure analysis of sparsity and minimality heuristics for reconstruction of biochemical networks.

[BibT_eX]

[DOI]

Proceedings of the 47th IEEE Conference on Decision and Control, 2008

Robust synchronization in networks of cyclic feedback systems.

[BibT_eX]

[DOI]

Proceedings of the 47th IEEE Conference on Decision and Control, 2008

2007

Analysis of Interconnected Oscillators by Dissipativity Theory.

[BibT_eX]

[DOI]

IEEE Trans. Autom. Control., 2007

Output synchronization in networks of cyclic biochemical oscillators.

[BibT_eX]

[DOI]

Jorge M. Gonçalves

Proceedings of the American Control Conference, 2007

2006

Clinical data based optimal STI strategies for HIV: a reinforcement learning approach.

[BibT_eX]

[DOI]

Proceedings of the 45th IEEE Conference on Decision and Control, 2006

2005

Feedback mechanisms for global oscillations in Lure systems.

[BibT_eX]

[DOI]

Syst. Control. Lett., 2005

2003

Dissipativity characterization of a class of oscillators and networks of oscillators.

[BibT_eX]

[DOI]