Elena Rivas

According to our database, Elena Rivas authored at least 11 papers between 2000 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

RNA covariation at helix-level resolution for the identification of evolutionarily conserved RNA structure.

Elena Rivas

PLoS Comput. Biol., 2023

2021

Rfam 14: expanded coverage of metagenomic, viral and microRNA families.

Ioanna Kalvari, Eric P. Nawrocki, Nancy Ontiveros-Palacios, Joanna Argasinska, Kevin Lamkiewicz, Manja Marz, Sam Griffiths-Jones, Claire Toffano-Nioche, Daniel Gautheret, Zasha Weinberg, Elena Rivas, Sean R. Eddy, Robert D. Finn, Alex Bateman, Anton I. Petrov

Nucleic Acids Res., 2021

2020

RNA structure prediction using positive and negative evolutionary information.

Elena Rivas

PLoS Comput. Biol., 2020

Estimating the power of sequence covariation for detecting conserved RNA structure.

Elena Rivas, Jody Clements, Sean R. Eddy

Bioinform., 2020

2018

Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families.

Ioanna Kalvari, Joanna Argasinska, Natalia Quinones-Olvera, Eric P. Nawrocki, Elena Rivas, Sean R. Eddy, Alex Bateman, Robert D. Finn, Anton I. Petrov

Nucleic Acids Res., 2018

2015

Parameterizing sequence alignment with an explicit evolutionary model.

Elena Rivas, Sean R. Eddy

BMC Bioinform., 2015

2008

Probabilistic Phylogenetic Inference with Insertions and Deletions.

Elena Rivas, Sean R. Eddy

PLoS Comput. Biol., 2008

2005

Evolutionary models for insertions and deletions in a probabilistic modeling framework.

Elena Rivas

BMC Bioinform., 2005

2001

Noncoding RNA gene detection using comparative sequence analysis.

Elena Rivas, Sean R. Eddy

BMC Bioinform., 2001

2000

The language of RNA: a formal grammar that includes pseudoknots.

Elena Rivas, Sean R. Eddy

Bioinform., 2000

Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs.

Elena Rivas, Sean R. Eddy

Bioinform., 2000