Ignacio Medina
Orcid: 0000-0003-0095-670X
According to our database1,
Ignacio Medina
authored at least 42 papers
between 2007 and 2020.
Collaborative distances:
Collaborative distances:
Timeline
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Bibliography
2020
Nat., 2020
2019
PyCellBase, an efficient python package for easy retrieval of biological data from heterogeneous sources.
BMC Bioinform., 2019
2018
Int. J. High Perform. Comput. Appl., 2018
2017
VISMapper: ultra-fast exhaustive cartography of viral insertion sites for gene therapy.
BMC Bioinform., 2017
2016
Actionable pathways: interactive discovery of therapeutic targets using signaling pathway models.
Nucleic Acids Res., 2016
MuffinEc: Error correction for de Novo assembly via greedy partitioning and sequence alignment.
Inf. Sci., 2016
BMC Bioinform., 2016
2015
IEEE ACM Trans. Comput. Biol. Bioinform., 2015
Assessing the impact of mutations found in next generation sequencing data over human signaling pathways.
Nucleic Acids Res., 2015
Nucleic Acids Res., 2015
A parallel and sensitive software tool for methylation analysis on multicore platforms.
Bioinform., 2015
Proceedings of the 2015 IEEE TrustCom/BigDataSE/ISPA, 2015
2014
A web-based interactive framework to assist in the prioritization of disease candidate genes in whole-exome sequencing studies.
Nucleic Acids Res., 2014
A web tool for the design and management of panels of genes for targeted enrichment and massive sequencing for clinical applications.
Nucleic Acids Res., 2014
Acceleration of short and long DNA read mapping without loss of accuracy using suffix array.
Bioinform., 2014
Inexact Sequence Mapping Study Cases: Hybrid GPU Computing and Memory Demanding Indexes.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2014
Design of a Generic Architecture for executing Bioinformatics Workflows on Distributed Infrastructures.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2014
Robust Error Correction for De Novo Assembly via Spectral Partitioning and Sequence Alignment.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2014
2013
Nucleic Acids Res., 2013
Proceedings of the 20th European MPI Users's Group Meeting, 2013
2012
Using GPUs for the Exact Alignment of Short-Read Genetic Sequences by Means of the Burrows-Wheeler Transform.
IEEE ACM Trans. Comput. Biol. Bioinform., 2012
VARIANT: Command Line, Web service and Web interface for fast and accurate functional characterization of variants found by Next-Generation Sequencing.
Nucleic Acids Res., 2012
CellBase, a comprehensive collection of RESTful web services for retrieving relevant biological information from heterogeneous sources.
Nucleic Acids Res., 2012
Nucleic Acids Res., 2012
Int. J. Data Min. Bioinform., 2012
Proceedings of the Euro-Par 2012: Parallel Processing Workshops, 2012
2011
Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing.
Nucleic Acids Res., 2011
Proceedings of the 30th International Conference of the Chilean Computer Science Society, 2011
2010
Serial Expression Analysis: a web tool for the analysis of serial gene expression data.
Nucleic Acids Res., 2010
Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling.
Nucleic Acids Res., 2010
2009
Gene set-based analysis of polymorphisms: finding pathways or biological processes associated to traits in genome-wide association studies.
Nucleic Acids Res., 2009
2008
Nucleic Acids Res., 2008
Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases.
Nucleic Acids Res., 2008
Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments.
Nucleic Acids Res., 2008
2007
Phylemon: a suite of web tools for molecular evolution, phylogenetics and phylogenomics.
Nucleic Acids Res., 2007
ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling.
Nucleic Acids Res., 2007
FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments.
Nucleic Acids Res., 2007
Bioinform., 2007