Julien Knafou

According to our database, Julien Knafou authored at least 14 papers between 2019 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Multilingual RECIST classification of radiology reports using supervised learning.

Luc Mottin, Jean-Philippe Goldman, Christoph Jäggli, Rita Achermann, Julien Gobeill, Julien Knafou, Julien Ehrsam, Alexandre Wicky, Camille L. Gerard, Tanja Schwenk, Mélinda Charrier, Petros Tsantoulis, Christian Lovis, Alexander B. Leichtle, Michael Kiessling, Olivier Michielin, Sylvain Pradervand, Vasiliki Foufi, Patrick Ruch

Frontiers Digit. Health, May, 2023

Deep learning-based risk prediction for interventional clinical trials based on protocol design: A retrospective study.

Sohrab Ferdowsi, Julien Knafou, Nikolay Borissov, David Vicente Alvarez, Rahul Mishra, Poorya Amini, Douglas Teodoro

Patterns, March, 2023

2022

Classification of oncology treatment responses from radiology reports with supervised machine learning.

Luc Mottin, Jean-Philippe Goldman, Christoph Jäggli, Rita Achermann, Julien Gobeill, Julien Knafou, Julien Ehrsam, Alexandre Wicky, Camille L. Gerard, Tanja Schwenk, Mélinda Charrier, Petros Tsantoulis, Christian Lovis, Alexander B. Leichtle, Michael Kiessling, Olivier Michielin, Sylvain Pradervand, Vasiliki Foufi, Patrick Ruch

Proceedings of the AMIA 2022, 2022

2021

Ensemble of Deep Masked Language Models for Effective Named Entity Recognition in Health and Life Science Corpora.

Nona Naderi, Julien Knafou, Jenny Copara, Patrick Ruch, Douglas Teodoro

Frontiers Res. Metrics Anal., 2021

Classification of hierarchical text using geometric deep learning: the case of clinical trials corpus.

Sohrab Ferdowsi, Nikolay Borissov, Julien Knafou, Poorya Amini, Douglas Teodoro

Proceedings of the 2021 Conference on Empirical Methods in Natural Language Processing, 2021

2020

UPCLASS: a deep learning-based classifier for UniProtKB entry publications.

Douglas Teodoro, Julien Knafou, Nona Naderi, Emilie Pasche, Julien Gobeill, Cecilia N. Arighi, Patrick Ruch

Database J. Biol. Databases Curation, 2020

SIB Text Mining at TREC 2020 Deep Learning Track.

Julien Knafou, Matthew Jeffryes, Sohrab Ferdowsi, Patrick Ruch

Proceedings of the Twenty-Ninth Text REtrieval Conference, 2020

Contextualized French Language Models for Biomedical Named Entity Recognition.

Jenny Copara, Julien Knafou, Nona Naderi, Claudia Moro, Patrick Ruch, Douglas Teodoro

Proceedings of the Actes de la 6e conférence conjointe Journées d'Études sur la Parole (JEP, 2020

An Extended Overview of the CLEF 2020 ChEMU Lab: Information Extraction of Chemical Reactions from Patents.

Jiayuan He, Dat Quoc Nguyen, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Ralph Hoessel, Zubair Afzal, Zenan Zhai, Biaoyan Fang, Hiyori Yoshikawa, Ameer Albahem, Jingqi Wang, Yuankai Ren, Zhi Zhang, Yaoyun Zhang, Mai Hoang Dao, Pedro Ruas, Andre Lamurias, Francisco M. Couto, Jenny Copara, Nona Naderi, Julien Knafou, Patrick Ruch, Douglas Teodoro, Daniel M. Lowe, John Mayfield, Abdullatif Köksal, Hilal Dönmez, Elif Özkirimli, Arzucan Özgür, Darshini Mahendran, Gabrielle Gurdin, Nastassja Lewinski, Christina Tang, Bridget T. McInnes, C. S. Malarkodi, Pattabhi Rk Rao, Sobha Lalitha Devi, Lawrence Cavedon, Trevor Cohn, Timothy Baldwin, Karin Verspoor

Proceedings of the Working Notes of CLEF 2020, 2020

Named Entity Recognition in Chemical Patents using Ensemble of Contextual Language Models.

Jenny Copara, Nona Naderi, Julien Knafou, Patrick Ruch, Douglas Teodoro

Proceedings of the Working Notes of CLEF 2020, 2020

BiTeM at WNUT 2020 Shared Task-1: Named Entity Recognition over Wet Lab Protocols using an Ensemble of Contextual Language Models.

Julien Knafou, Nona Naderi, Jenny Copara, Douglas Teodoro, Patrick Ruch

Proceedings of the Sixth Workshop on Noisy User-generated Text, 2020

BioBERTpt - A Portuguese Neural Language Model for Clinical Named Entity Recognition.

Elisa Terumi Rubel Schneider, João Vitor Andrioli de Souza, Julien Knafou, Lucas Emanuel Silva e Oliveira, Jenny Copara, Yohan Bonescki Gumiel, Lucas Ferro Antunes de Oliveira, Emerson Cabrera Paraiso, Douglas Teodoro, Claudia Maria Cabral Moro Barra

Proceedings of the 3rd Clinical Natural Language Processing Workshop, 2020

2019

SIB Text Mining at TREC 2019 Deep Learning Track: Working Note.

Julien Knafou, Matt Jeffryes, Luc Mottin, Douglas Teodoro, Patrick Ruch

Proceedings of the Twenty-Eighth Text REtrieval Conference, 2019

A Data-Driven Approach for Measuring the Severity of the Signs of Depression using Reddit Posts.

Paul Van Rijen, Douglas Teodoro, Nona Naderi, Luc Mottin, Julien Knafou, Matt Jeffryes, Patrick Ruch

Proceedings of the Working Notes of CLEF 2019, 2019